Oncorhynchus mykiss (rainbow trout): 110490516
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Entry
110490516 CDS
T07259
Name
(RefSeq) H-2 class II histocompatibility antigen, A-Q alpha chain
KO
K06752
MHC class II antigen
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145
Phagosome
omy04514
Cell adhesion molecules
omy04672
Intestinal immune network for IgA production
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110490516
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110490516
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
110490516
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110490516
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110490516
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110490516
Exosomal proteins of epithelial cells
110490516
Exosomal proteins of breast milk
110490516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
Ig_2
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
110490516
NCBI-ProteinID:
XP_036822698
Ensembl:
ENSOMYG00000005905
UniProt:
A0A8K9V2J7
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All DBs
Position
3:complement(5796918..5799016)
Genome browser
AA seq
244 aa
AA seq
DB search
MNLSVAIVVLTAVVCTSAEIPHETVYVQGCLENTKVEAEAELQVDGEEVVYADFQSGQEV
WTLPEFLGPFPSSTVRNFYKNAVKGRRLCQDALALWILEEKCPPEVKDAPESTIYPRAEE
VLGVENTLICFANHFYPPPVKVNWTKNGLEVTEGASLSRYYPNKDGTFHQFSSLSFTPQE
GDVYACTVEHTALEDPKTRFWEYKIHEVSGSSAGPAVFCGVGLTLGLLGVATGTFLYVKG
QQFN
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctctgtggctattgtcgttcttactgcggtcgtctgcacttcggcagaaatt
cctcatgagaccgtctatgtgcagggctgtcttgagaatacaaaggtggaggcggaggca
gagcttcaggtggatggggaggaagtggtatatgctgacttccagagtggacaggaagtt
tggacattgcctgagttcctggggccattcccaagctccactgttcgtaacttctacaag
aatgccgttaaaggcagacgattgtgtcaggatgccttggctctttggatattagaagaa
aagtgtccacctgaggtaaaagatgcccctgagagcaccatctaccccagggctgaggag
gtgctgggggtggagaacacccttatctgctttgccaatcatttctaccccccgcctgtc
aaagtcaactggaccaagaatggcctggaggtgactgagggagcgtctctcagtcggtac
tatcctaataaagatggaacgttccaccagttctccagcctgagtttcactccacaggag
ggggatgtctatgcctgcactgtggagcacacagccttggaggaccccaaaaccaggttc
tgggagtataagatacatgaggtgagtgggtccagtgctggtcctgctgtattctgtgga
gtgggcctgactctgggactgttgggagtggctaccggaacattcctgtacgtcaaagga
caacagtttaactga
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