Oncorhynchus mykiss (rainbow trout): 110490568
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Entry
110490568 CDS
T07259
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04115
p53 signaling pathway
omy04210
Apoptosis
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110490568
04115 p53 signaling pathway
110490568
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110490568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
APAF1_C
Beta-prop_EML_2
NB-ARC
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
APAF-1-like_WHD
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
CARD
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
RMC1_N
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
eIF2A
Ge1_WD40
WD40_like
Beta-prop_Nup120_160
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_WDR75_2nd
CARD_2
Beta-prop_WDR11_2nd
NACHT
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
110490568
NCBI-ProteinID:
XP_036800830
Ensembl:
ENSOMYG00000034118
UniProt:
A0A8C7W7P2
LinkDB
All DBs
Position
15:complement(62635638..62712367)
Genome browser
AA seq
1266 aa
AA seq
DB search
MAMMEEGARSCLLQSRSSLEQDIRASYLMDHMISDGVLTGDEEDRIRSKPTRKEQAAALL
ELLLRKDNHAYISFYNALVRESYGDLASLLHNSLPLVSPEAEKSFSDGGTRYVQAVLSEG
GVPQRPVVFVSRPALMNRVREKLYHLQKEPGWVTVFGMAGSGKSVLAAEAVRDHALITEC
FPGGVHWLSVGQLDRSDLLVRIQSLCFRLEQQSQEKDPSSSLHRPPGSLEEAKERLRFLM
LRRYPRSLLILDDIWDSSVLKAFDIQCRVLLTTRDRSLADCVSGSKSEVAVESGLEEDQA
LEILALYVNGKPQRLPEQARSIVRECKGSPLVVSLIGALLREFPDRWAYYLHTLQQKKFK
RIRKSSSYDYDALDQAMAASIQVLSEEHRERYIDLTVLEKDVKVPAKVLSVLWDLEPEEV
EDVLQDFVNKSLLFRDCHHRPYLYYLHDLQLDFLAEMNRSGLESLHTKVVRQYQQRYSQG
PPTSGDEECLYWFRFLTYHMAKANLTQELCSLMFSLDWVRTKAQIMGPAHLINDYVEYGA
ILDKENSEVRGQFQEFLSLNGHQLEQRPFPDVVQLALSQPDSSEVYRQALLQAQERATRG
GLYLDWVNKSSLKSLSRLVVQPHQGSIYSACFSHDGTKIASCGSSKTLRVFKSTSGEKML
EIQAHDDEVLCCAFSPDDRLLATCSSDRKVKVWNVERGTLMRVFEDEHEEQVNHCQFTNT
RRRLLLATCSNDKFMNTKLWNINKPSSQNTMFGHLEPVNHCCFSPDDAYLSTSSSDGTLK
LWEVSSANEWKSIDVADMFSEQREQTEVMVKCSTWSAGGRTIICAARNAVFVFDVEAAAM
LLEIRTSRLSTVQYCHACPSSNLVAIALSHYAVELWDIETSKKMADCSGHLSWVHGVQFS
PDGSLLLSCSDDQTVRVWETKKVHTSSAVCLKRDSDVLFNNGDITVVAADNRNRLQVRNG
RTGAVMFQSENQESRIRCTAICSQTSAVGLGREDGTIQVLEVPSGTSLATLQGHTRTVLH
CQFTPEGHTLITSSEDTTIRVWRWRTGECVVLEGHKEQVRCFSLLTTTPSSETHLLSWSF
DGTIKVWDMSSGERLQDLVCHQGAVLACDVSPDGQLFATTSADKTAKVWSSASWECVRLL
TGHQDCVRSCRFSWDGRRLATGDDNGEIRLWNVKDGTLLKICSRDNKDAMDSLHGGWVTD
LHFSPDNTVLLSTGGYIKWWNVEKGEALQTFYPTGANLKRIHVSPDFSTFVTIDNIGILY
ILKKVE
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatggaggaaggggcacggagctgcctgcttcagtcacgctccagcctggag
caggacatcagggcttcctacctgatggatcacatgatcagtgacggtgtgctgacgggg
gacgaggaggacaggatcaggagcaagcccaccaggaaagagcaggcggcggccctgctg
gagctgctcctgaggaaggataaccatgcctacatctccttctacaacgccctggtccgc
gagagctacggagacctggccagcctgctccacaacagcctgcccctggtctcccccgag
gctgagaagagcttctcagacggtggcacccgctatgtccaggcggtgctgagtgagggc
ggcgtgccccagagacccgtggtgtttgtgagccggccagccctgatgaaccgggtcagg
gagaagctctaccacttgcagaaggagcctggctgggtcactgtgttcggcatggccggc
tccggcaagtctgtcttggctgcggaggcagtccgagaccacgcactcatcacagagtgt
tttccgggaggagtccactggctgtccgtaggccagctggaccggtctgacctgctggtt
aggatccagtcactgtgtttccgtctggagcagcagagccaggagaaagacccctcgtcc
tccctccaccggcctcctggctctctggaggaggccaaggagcgactacgcttcctcatg
ctccgtcgttaccccaggtcgttgctgatactggatgacatctgggacagctcggtgctc
aaggcctttgacatccagtgtcgagtactgctcaccacccgagacagaagcctagccgac
tgtgtcagcggttctaagtctgaggtggcagtggagagtggtctggaggaggatcaggcc
ttggagatcctcgccctgtatgtcaacgggaaaccccagagactcccagaacaggcccgc
agcattgtcagagagtgcaaaggctctcccttggtggtgtccctaatcggggccctgctg
cgggagttcccagaccgctgggcctactacctgcacactcttcagcagaagaagttcaag
cgtatccgtaagtcgtcttcgtatgactacgatgcccttgaccaggccatggctgccagc
atccaggtcctgtctgaggaacacagagagcgatacattgacctcaccgtgctggagaag
gacgtcaaagtacctgccaaggttctgtcggttctgtgggatctagaaccggaggaggtg
gaggatgttctccaggactttgtgaacaagtccctactgttccgtgactgtcaccaccgg
ccctacctctactacctccacgacctccagctggacttcctggctgagatgaaccgctct
ggtctagagagcctccacaccaaggtggtgcgtcagtaccagcagcgctacagccagggt
ccccccacctcaggagatgaagagtgcctttactggttcagattcctcacctaccacatg
gccaaggccaacctcacacaggagttgtgctctctgatgttctctctggactgggtcaga
actaaagctcagattatgggaccggctcatctcatcaatgactatgttgagtacggagcc
atcctggacaaagagaacagcgaggtgcggggccaattccaggagttcctgtctctgaac
ggccaccagttggagcagcgtccgttccctgacgtagtgcagctggccctgtcccagcca
gactcctctgaggtgtaccgccaggccctgctgcaggcgcaggagagggccaccagaggg
ggactctaccttgactgggtgaacaaaagtagtctgaagagcctgtctcgtctggtggtc
cagccccaccagggatccatctactctgcctgcttctcccacgacggcaccaagatcgcc
tcctgtggctccagcaagacactgcgagtgtttaagagcacgtctggggagaagatgctg
gagatccaggcccacgacgatgaggtgctctgctgcgccttctccccggatgaccgtctc
ctagcaacctgctccagtgataggaaggtcaaggtttggaacgtggagcgtgggactctg
atgagggtgtttgaggacgaacacgaggagcaggtcaaccactgtcagttcaccaacaca
cgccgacgcctcctactggccacctgttccaacgacaagttcatgaacaccaagctgtgg
aacatcaataaaccctcttcccagaacaccatgtttggtcatttggagcctgtcaatcac
tgctgtttctcccctgatgacgcctacctctccacctcttccagcgacggaaccctgaag
ctgtgggaggtgtcctcggctaatgagtggaagtccatagacgtggcggacatgttctcg
gagcagagagagcagacggaggtcatggtgaagtgcagcacctggtcagcaggcggcagg
accatcatctgtgctgccaggaacgcagtctttgtgtttgatgtagaggcggcggccatg
ttgttggagatccggaccagtcgtctgagcacggtgcagtactgtcacgcctgccccagc
agcaacctggtggccatcgcactgtcacactatgctgtggagctgtgggacatagagacc
agtaagaagatggctgactgtagtggtcatctgagctgggtccatggagtccagttctcc
cctgacggatctctactgctctcctgttctgacgaccagaccgtcagggtgtgggagact
aaaaaagtccacacctcatcagctgtctgtttgaagagggattctgacgtgctctttaac
aacggtgacattaccgtggtcgccgccgacaaccgcaacagactgcaggtgaggaatggg
aggaccggagcggtgatgttccagtcagagaaccaggagtctcgtatccgctgcactgct
atctgctcacagacctcagccgtggggctgggacgagaggatgggactatacaggtgttg
gaggtgccgtcggggacctctctagccactcttcagggtcacaccaggacagttctccac
tgccagttcaccccggagggacacacactcatcacctcctctgaggacaccaccatacgg
gtgtggaggtggaggacaggtgagtgtgtggttctggagggccacaaggagcaggtcaga
tgcttctctctgctcaccaccacaccctcctcagagacacatctcctcagctggtccttt
gacggcaccatcaaggtgtgggacatgtctagtggtgaacggctacaggacctagtgtgt
caccagggggcggtgctagcctgtgacgtgtcgcctgatggacagctcttcgccaccact
tccgctgacaagactgccaaggtgtggagcagtgcatcgtgggagtgcgtgcgcctgttg
accggccaccaggactgtgtccgcagctgccgcttctcttgggatggccggcgcctagca
accggcgacgacaacggagagatacggctgtggaacgtgaaggatggtactctgcttaag
atctgttcccgtgacaacaaggacgccatggactctctgcatggaggctgggtgaccgac
ctgcacttctccccagacaacactgtgctgctgtctacaggaggatacattaagtggtgg
aacgtggagaaaggagaggccctccagaccttctacccgacaggagccaatctgaaaagg
atccacgtgtcacctgacttctccaccttcgtcaccatcgacaatatcggaatcctctac
atcctgaagaaggtggaatga
DBGET
integrated database retrieval system
