Oncorhynchus mykiss (rainbow trout): 110491673
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Entry
110491673 CDS
T07259
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03440
Homologous recombination
omy03460
Fanconi anemia pathway
omy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110491673
09124 Replication and repair
03440 Homologous recombination
110491673
03460 Fanconi anemia pathway
110491673
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110491673
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110491673
03036 Chromosome and associated proteins [BR:
omy03036
]
110491673
03400 DNA repair and recombination proteins [BR:
omy03400
]
110491673
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110491673
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110491673
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110491673
Multi subunit type E3
BRCC complex
110491673
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110491673
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110491673
BRCA1-A complex
110491673
BRCA1-B complex
110491673
BRCA1-C complex
110491673
BRCA complex
110491673
FA (Fanconi anemia) pathway
Downstream FA components
110491673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-C3HC4
BRCT_2
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-Nse
zf-RING_5
PTCB-BRCT
zf-ANAPC11
zf-MIZ
U-box
zf-RING_4
RTT107_BRCT_5
YicC-like_C
zf-RING_10
zf-rbx1
YafT
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
110491673
NCBI-ProteinID:
XP_036802456
LinkDB
All DBs
Position
16:complement(23504896..23551796)
Genome browser
AA seq
1573 aa
AA seq
DB search
MNTVMSPKAEDVRQGISVICEILQCPICLELMSTPVSTKCDHQFCKFCIMKLLDNSRRKE
ANCPVCKTKITKRSLQESPGFQKLAEGLQNMVQAYEHDTCTNYFTGMSQVRRHMSVTETV
QKKNGHDVSSDDVWASDRADDEDHEFSMSCSSTIAAKDGFATLMGLEDSCPVISDEGFDS
SLGDIPPATEKHTDDSKATSTTEKQKPALEAEIPEVVERAPSRPQKLGQKITTHPQDPPC
CPEKVRNQPVRRSMRNNKRESLPEMIDQNQKKSLEKVSEWLMNNSSTEVNSEKEKNTEGS
YDSVSLAGSCSPSSPLEDNLRNKDQSPKREERGKCLEELVFGAVYKRDRRGNRSFSPQNI
AITDPPPPCPAEELQILKKIAKRRMRNKLTPADFVKRPRSEENEGVMDDQPEMTEPQEDS
PNEHPKDTEEDKLIDLTGELNSNSSDKQGEELDELPEGDNKENEDVEDSPVFDVPLREPG
RKSNKKMHGRWQDVDGDLQGKVKSENNEQKKPAKKKGENIKVEKSKATKSLVLVGVGEGG
SDSKMPKSRPSGQTEVQIESYPSSEDPGSPITRRTRRSRRLQLFTEEVQGSNKIGTATST
KVVVLDSDCNEMQQSKEAKADTDRDNVACLQNQNTEKAIRKNGCVLDEEMGGIESLDSSE
KRLCEMIESQKVNQVEESIVEVPSTGSPCHADVACSVTMVPSSISTPEASVSCAVPESVN
QSNPVIKPLDDLRSNVPQETSASQAKCIDLDEDVRNDSELDTEQLLKSFKATKRKSFHLG
SPNIKRSSFWSNKEITTLTKTQENKHVGTDMEAGNGQGFSRTTECPTVQQESEKGTIFEN
SCCSDLSPPSSSLNNISQEKAQRNRKRLRKSILTRPPQDLVDSSNPDTSGKTQKQILARL
SGNSSKSALSPNKVTKSQMESPHQAVGSGLLFPAFGASKEDLPDPTPVASKQLRVPKSQQ
LYKVEGSMRKSPTELESSHSVGSETAVELNKTCPENMTGNMANTESSLTPDGLLPIIQSV
VIQEAQRTKRCGVVSLHSPIKSTLKRRKAQRLESSSESNCSGEEEELPSLAQIFRPSTCP
PTAEEEEEESVTLLKDHAREQGSYREAGDAAEDGQRASSPPMCPSPEWVTTSQASVDLFG
TPEEAEGMAGDTGLTQESSQFSSECIATQQKVAMQEELRRLERMMALVSEALQEKEEEPT
GAKVYPGAPYPPALLQPDRSTVSLGLDLQVTLPCGQGTRKRSASREGAQNIGGNAASPPP
GLGDCEGLGPTPTTPCRTKHEGPGGTGAGQLGRQSGRSLRSSMRARPNQVSPVVRVHCGT
NAPSAGLEVQDTPVVIQPANTHPSTHTPLREPAGVKLVLVASGLSAPEQSMVKKFAKRMG
GSVCSQVTSETTHVIMNTDGDLVCERTLKYFLGIAGRKWVVSFQWISECFKQGTVLNENI
LTLRRPQPTQTSFEVRGDVVNGHDHQGPMRARTTGDTSLLMKDYEICFQGPFTDMTTGQM
EWMVELCGATVVQEPLLFTGELKTRQLIVVQPGSDQSPINYQALQRIATVITRGWVFDSV
ATYTLQSLDNYRT
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggtgatgtccccgaaggctgaagatgtcagacaggggatctctgtcatctgt
gagatcttgcagtgtccaatatgtttggaattgatgagcacacctgtgtctactaagtgt
gaccaccagttttgcaagttttgtataatgaagcttttggacaacagtaggagaaaggag
gccaactgtccagtttgtaagacaaagatcacaaaaaggagtttgcaggagagccctggg
ttccagaaattggccgagggattgcagaatatggtccaggcctatgaacatgacacctgc
acaaactacttcactggaatgtcccaggtgaggagacatatgagtgtcacagagactgtg
cagaagaaaaacggccatgatgtctcatctgatgacgtatgggctagtgaccgtgctgat
gacgaggatcatgagttttcaatgtcctgctcgtcaactatagcagccaaggatggcttt
gcaacgctcatgggtcttgaagattcttgccctgtcatttcggacgaggggtttgacagc
agcctaggtgacatacctccagccactgaaaagcataccgatgactctaaagctacctcc
accacagaaaaacagaagccagcattagaggcagaaatacctgaggttgttgaaagagct
ccttcacgacctcaaaagcttggacaaaagataaccactcatcctcaagatccaccatgc
tgtcctgaaaaggtcagaaaccaacctgtcagacgatccatgaggaataacaaaagagag
tcattgcccgaaatgattgaccagaatcagaagaaaagtctagagaaagtctctgagtgg
ctcatgaataattcctcaacagaagtaaactctgagaaggagaaaaacacagagggctct
tatgactcagtttctttggcaggaagttgttccccctcctcacccttagaggataacctc
agaaataaggaccagagtccaaagagagaagagcgtggcaaatgtcttgaggagctggta
tttggggctgtttacaaacgggatcgaagagggaaccgcagtttttcaccacagaatata
gcgatcacagaccctccaccaccctgtccagctgaggaactccagatcctgaagaagatt
gccaaaaggaggatgagaaataaactgacacctgctgactttgtcaagagaccaagatct
gaggagaatgaaggtgttatggatgaccaaccagagatgacagaaccacaagaggattct
cccaatgaacacccaaaagatactgaagaagataagttgattgacctgactggggagctg
aattctaatagctctgacaagcaaggagaagagcttgatgagttgccggaaggtgacaac
aaagagaacgaagatgtagaggacagtcctgtgtttgatgtgccactacgggaacctggg
aggaagtcaaataaaaagatgcacggtaggtggcaggacgttgacggggatttacaaggg
aaagtaaagtcggagaataacgagcaaaaaaagcctgccaagaaaaaaggggaaaacatc
aaggtggagaagagcaaggcaaccaaatccttagtccttgtgggtgtcggagagggtgga
agtgactctaagatgcctaagagcagaccgtcaggccagaccgaggttcagattgagagt
taccctagcagtgaggatccaggaagcccaatcacgaggagaaccaggaggagtcggagg
cttcaactcttcacagaggaagtacaagggagtaacaagatcggcactgcaacatccaca
aaggttgtcgttcttgattcagactgcaacgagatgcagcaatcaaaggaggcgaaagct
gacaccgacagggataatgtggcgtgtttgcagaaccaaaatacagaaaaggctatcagg
aaaaacggatgtgttttagatgaagaaatgggaggtattgagagcttggactctagcgag
aaaagattgtgtgaaatgattgagtcacagaaagtgaaccaagttgaggagtctattgtc
gaagtcccaagtacaggaagtccttgtcacgcagatgttgcttgttcagtgactatggta
ccaagttcaattagtacccctgaggcaagtgtctcatgtgccgtgcctgagagtgtaaac
caaagtaatccggttatcaaaccattagatgacttgagatcaaatgtaccacaagagacg
tcagccagccaggccaaatgcattgatctggatgaggatgtccggaatgacagtgagctg
gacactgagcaactgctgaagagcttcaaagccaccaaaaggaagtccttccaccttggt
agtccaaatatcaagaggagttccttctggtccaacaaggagattacaactcttacaaag
actcaagagaacaaacatgttggcacagatatggaagcaggaaatgggcagggattttca
aggacaacggagtgtcccacagtccaacaggaatctgagaaagggacaatattcgaaaat
tcttgctgtagtgatttgagcccaccttcaagttccctcaacaatatttcacaagaaaag
gctcagaggaatcgtaaaaggctcagaaaatccattcttaccagaccacctcaggattta
gtggattcttcgaaccctgataccagtgggaagacccagaaacagattctggccaggctt
tctggcaacagctcaaaaagtgccctcagtcccaacaaagtcacaaaaagccaaatggaa
tctccccaccaagctgtgggttctggtctgctctttccagcttttggcgcctctaaggaa
gatctaccagatccgacacctgtagcttcaaagcaacttagagtccctaaaagtcagcag
ctatacaaagtggagggcagcatgaggaaaagtccaacagaactggagagtagccacagt
gttggatcagagacggcagtggagttaaacaaaacatgtccagagaacatgactggaaac
atggccaatacagagtcctccttgactccagatggcctccttccaattatccaatcagta
gttatccaagaggcgcagaggacgaaaagatgtggtgtggtcagcttgcactctcccatc
aagagcaccctaaagcggaggaaggctcagagactggagtcttcctcggagtccaactgc
agtggggaggaagaggaactgccttcccttgcgcaaattttcagaccttcgacttgtcca
ccaaccgctgaggaggaggaggaggaatcagtcacattgctcaaagaccatgccagggaa
caaggaagctacagggaggctggtgatgcagctgaagatgggcagcgagcgagcagtcct
cccatgtgccccagtcccgaatgggtcaccaccagccaggcatctgtggatctgtttgga
acaccagaagaagctgaaggaatggcaggtgacactggcctgacacaggaatcatcacaa
ttttcaagcgagtgtattgccactcagcaaaaggttgcgatgcaggaggagctgcggagg
ctggagagaatgatggcgttggtgtctgaagcgctccaggagaaggaggaggaacccact
ggggccaaagtctaccccggggccccatatcccccagcgctgctgcaaccagacaggtcc
acagtctccttaggccttgatctccaggtgaccctgccgtgtggccagggcaccaggaag
agatctgccagcagggaaggtgcccaaaacattgggggaaatgcagcctcaccgccccct
ggtcttggagactgtgagggccttgggcccacccccaccacgccctgccgcaccaaacat
gagggacctggagggactggagcagggcagcttggcagacagtcaggacggagcctaagg
agcagcatgagagcgaggcccaaccaggtgtcgccagtggtcagagtgcactgcgggacc
aatgctccctcagctgggctggaggtccaggataccccggtggtcatccagcctgcaaac
acacacccgtcaacacacactccactgcgggaacccgctggggtcaagttggtgctggta
gcatcaggactcagtgcacctgaacagtcgatggtgaaaaagtttgccaagaggatggga
ggcagtgtgtgttcacaagtgacgtccgagaccacccatgtcatcatgaacacagatggt
gatctggtgtgtgagcgcacgctcaagtacttcctgggcatcgcaggcaggaagtgggtg
gtgagcttccagtggatttccgagtgtttcaaacaagggacagtcttaaatgagaatatt
ttaacccttcgtcgcccccaacccacacagacgtcatttgaggtgcgaggagacgttgtg
aacggacatgatcaccaagggccgatgagagcacggaccacaggggacacaagtctgctg
atgaaggattacgagatctgtttccaaggccctttcaccgatatgaccactggtcagatg
gagtggatggtggagctttgcggcgcaacagtggttcaagagcctcttctcttcactggt
gaactgaaaactcgtcaactaatagtggtacaaccaggctcggaccaatcaccaataaac
taccaagccctccagaggatagccacggtcatcacccgtggttgggtatttgattccgtg
gcaacctacacccttcaaagcctcgacaactacagaacgtaa
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integrated database retrieval system
