Oncorhynchus mykiss (rainbow trout): 110493771
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Entry
110493771 CDS
T07259
Name
(RefSeq) TNF receptor-associated factor 5 isoform X1
KO
K09849
TNF receptor-associated factor 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04217
Necroptosis
omy04621
NOD-like receptor signaling pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
110493771
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110493771
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110493771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110493771
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
110493771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-TRAF_2
zf-C3HC4_2
TRAF3_RING
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
EzrA
Spt20_SEP
DUF1151
Motif
Other DBs
NCBI-GeneID:
110493771
NCBI-ProteinID:
XP_021423916
LinkDB
All DBs
Position
17:complement(34133047..34144263)
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AA seq
510 aa
AA seq
DB search
MNVDVNYKSTLRISSHIPFLKTRRQAAMATKESDPSGSGGISRQNSGVGGQWESDLTAVQ
HSLKFVKNLEEHYVCPTCKGVVLNPHQTSCGHISCYRCIQGLLENSPATTSACLLDRGLI
RSDEEHERYTCPEVEIKCPNKCSQMIKRCMLEDHADQCPEVKTDCVYKKYGCSVRERRAQ
VKVHEETALNHHILLVLGSNTKLETQMEILQQEVLLRHKELQERSRQVSGLEEGVRPLAQ
LVSRCDNTLSAVQGSLEDQRDHISSVQLQLEELSSVFGPGVAREELGQIRASLDALRQQV
SVTEGLKDHLGELKETYMRHSRLLSIHTAQLECNEEHFRELESTSYDGKLIWKLRDYRKK
KEAGARGQGPCLSSVPFHTGRCGYKMAARAYLNGDGAGRDTHLSLYVVLMRGDFDPLLPW
PFRQPVSLSVLDQSGTNNHLTMSFKPDPENTSFHRPGSAAANASAPTNVASGFQCFASHA
QLETPKNAIYVRDDTLFVKVKVDTSGLEDL
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggatgtaaattacaaaagtacattaagaatatcgtcgcacattccgttttta
aagacacgtcgacaggctgccatggcaacaaaggagagtgacccgagtggatccggagga
atctccaggcagaattcgggagtggggggacaatgggaatcggacttgactgcggtgcag
cacagtttgaagtttgtgaagaacctggaagagcactatgtttgtcccacctgtaaagga
gttgttctcaacccacaccaaaccagctgcggacacatctcctgctaccgctgcatccaa
gggctcctggaaaactccccagccaccacctcggcctgtcttttggacagaggtttgatc
agatctgatgaggaacatgagaggtatacatgcccagaggttgaaatcaagtgccccaac
aaatgctcccagatgattaaaagatgcatgcttgaagaccatgctgaccagtgtcctgag
gtgaagacggactgtgtttataagaaatatggctgctctgtccgggagaggagagcccaa
gttaaagttcacgaggaaaccgctctcaatcaccacatcctcctggttctggggagcaac
accaagctggagacacagatggaaatcctccagcaggaggtgctgctgaggcacaaggag
ctccaagagaggagccgccaggtcagcggtctggaggagggggtccgcccgctggcccag
ctggtcagccgatgtgacaacaccctgtctgcagtacagggctctctggaggaccagagg
gaccacatctccagcgtccagctccagctcgaggagctgtccagtgtgtttggccctggt
gtggcccgggaagaactgggccaaatcagagcgtccctggatgccctcagacagcaggtg
tccgtcacggaggggctcaaagaccacctgggggagttgaaggagacttacatgcgccat
tcgcgcctcctcagcatccacacggcgcagctggagtgcaacgaggagcacttcagagag
ctcgagtccacctcgtacgacggcaagctcatctggaagctccgcgactaccgcaagaag
aaggaggccggggcacgaggccagggaccgtgcctaagcagcgtacccttccacacgggc
cgctgtggctacaaaatggccgccagggcctacctgaacggcgacggggcaggccgggac
acccacctgtctctctacgtggtcctcatgaggggcgacttcgaccccctcctgccctgg
cccttcagacagcctgtgtcattgtcagtgctggatcagagcggcaccaacaaccaccta
actatgagtttcaaacccgacccggaaaacactagcttccaccggcccggctcggccgct
gcaaacgccagcgcccccaccaacgtggcctctggtttccagtgctttgcctcgcatgcc
cagctagagacgcccaagaacgccatctacgtgagagacgatacgctctttgttaaggtc
aaagtggacacgagcggtttggaggacttgtag
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