Oncorhynchus mykiss (rainbow trout): 110497796
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Entry
110497796 CDS
T07259
Name
(RefSeq) guanine nucleotide exchange C9orf72 isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110497796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110497796
Membrane trafficking [BR:
omy04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
110497796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
110497796
NCBI-ProteinID:
XP_021429839
Ensembl:
ENSOMYG00000022512
UniProt:
A0A8C7REX3
LinkDB
All DBs
Position
19:39064100..39070901
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AA seq
463 aa
AA seq
DB search
MSSDPPQSPTVAKTEVTVEGECPIFAATFAYWDNILGPRVCHIWAPRCEQPLLLSDGEVT
FLANHTLNGEILRSTECGAVDVKFFVLAEKGVIIISLIFDGELKGDKNTCALSIILPQTE
LAFYLPLHMVCVDRLKHIIRKGRIWMQKGYNIISVLSSEIVPIMELLSSMKTHSVPEDID
IKDTILNDDDIGDGYHEDFLHKAVSSHLQTCGCSMVVGSNPDKVNKVVLTLCLFLTPAER
KCSRFCKADSTFKYDTGLFVQGLLKDSMGSFVLPFRQVLYSPYPTTHIDVDINTVKQMPP
CHEHTHIQRRYMRSELSVLWKVASEEDIAPDTDTGIHTDESFTPDLNVFQDVMHKDTLVK
SFIDEVFMLKPGLNLRSTYLAQFLLILHRKALTLLKYIEDETQKGKKPFRSLRSLKTDLD
LMVEGDLNIIMALAEKQRAGLHSFVFGKQFYTSVRERDVLMSF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagacccacctcagtcgcccacagtggctaagacagaggtgactgttgaagga
gaatgccctatcttcgctgccacctttgcctactgggacaacatcctgggcccgcgggtg
tgtcacatctgggctcccaggtgcgagcaaccactgttgctgagcgatggcgaagtcacc
ttcctggccaatcacacgctgaacggggagattctgcgcagcacagagtgcggcgccgtg
gatgtcaaattcttcgtcctagctgagaagggtgtcatcatcatctcgctcatcttcgac
ggcgagctgaagggtgacaagaacacctgtgccctgtccatcatcctgccgcagacagag
ctggccttctacctgcccttgcacatggtctgtgtggatcggctcaaacacataatccgc
aagggacgcatctggatgcaaaagggctacaacataatttctgtgctgtcatcagagatt
gtccccatcatggagctgctgtcatccatgaagacacacagtgtcccagaggacatagac
atcaaggacaccatcctaaatgacgatgacatcggagacggctatcatgaagatttcctg
cacaaggcagtcagttctcatctccaaacttgtggctgctccatggtggtcggaagcaac
ccagacaaagtcaacaaggtagtgctcacgctgtgcctcttcctcacccctgctgagagg
aagtgctctcggttctgtaaagctgactctactttcaagtatgacacaggactgtttgta
caaggcctcctcaaggactccatgggcagttttgtcttgcccttccgccaggtgctgtac
tcaccctacccgaccacgcacatcgacgtggacatcaacacggtgaagcagatgccgccc
tgccatgagcacacacacattcagcggcgctacatgcgctcagagctcagcgtgctctgg
aaggtggccagcgaagaggacatcgcccccgacactgacaccggcatccacactgacgag
tccttcacccccgacctaaatgtttttcaggacgttatgcataaagacaccctggtaaag
tcatttatagatgaggtgttcatgctgaagccaggtctcaatctgcgaagtacttacttg
gcccagttcttgctgatccttcacaggaaggcgctcacactactcaaatacattgaagat
gagacgcaaaagggaaagaagcctttccgatccttgcgcagcttgaagaccgacctcgac
ctgatggtggaaggcgacctgaatatcatcatggcgttggctgaaaagcaaagggctgga
ctgcactcctttgtatttgggaagcaattctacaccagtgtacgggagcgagatgtgctc
atgagcttttga
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