Oncorhynchus mykiss (rainbow trout): 110498696
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Entry
110498696 CDS
T07259
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110498696
Membrane trafficking [BR:
omy04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110498696
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
110498696
NCBI-ProteinID:
XP_036809708
Ensembl:
ENSOMYG00000035865
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All DBs
Position
19:27456998..27512089
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AA seq
1828 aa
AA seq
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MKKSRGHKSDHGKGGRGDEAAILETEDLDFMGGMGGGGGPDPDTISLASVTAVTTNVSNK
RSKPDIKMEPSAGRPMDFQVSVTVIEARQLVGLNMDPVVCVEIGDDKKYTQMKESTNCPY
YNEVTNLPWNDEFHDKEDEVDEENDDDDDNKYFVFDFHVPSDVMFDKILKLSVIHSKNLL
RSGTLVGSFKLDVGTVYSHPEHQFFHKWAFLSDPDDITAGCKGYIKCDIAVVGKGDNIKT
PHKATETDEDDVEGNLLLPEGVPAERQWARYYVKIYRAEGLPKMNTSIMANVKKAFIGEN
KDLVDPYVQILFAGQRGKTSIQKSSYEPIWNEQIVFTEMFPPLCKRMKVQIRDSDKVNDV
ALGTHFIDLRKIANDGDKGFLPTLGPAWVNMYGSTRSYTIMDEHQDLNEGLGEGVSFRAR
LLVSLGVEILDTSSPDIMSSTEVQVEGVPNISESATGKVEEFFLFGVFLEATMIDRKIGD
KPISFEVTIGNYGSEIDGVTKPKSGSGKRSGGDGDEEESELIQGSSDEEEGDDNDLVSVS
STPPMKPVITDRNYFHLPYFERKPCIYIKSWWQDQRRRLYNANIMDNIADKLEEGLNDVQ
EVIKTEKAYPERRLRGVLEDLGNGCSQFLTLANKDQNQTGRTKLDKERLKSCMRELESIG
QQAKTIRTQVKKNTVRDKIKLVQNFLQKLRFLADEPQHSIPDIYIWMMSNNKRIAYARVP
SKDILYSGVDEETGKDCGKVKTIFFKLPGKKGFGAAGWTVQAKTEIYLWLGLNRQRKDFL
SGLPNGFEENKMLKGPGSQSAPPISLTYTMKQIFQLRVHMYQARSLFAADSSGLSDPFAR
VFFSTHSQVTEVLNETLCPTWDQLMVYDNVELFGEVGELRDDPPIIVIEIYDQDTVGKAE
FMGRTFAKPITKMADEHYGPPRFPPQLEYYQIYRGNCAAGEMLAAFELLQIGPHGKADLP
PIDGPTDMDRGPILPVPLGIRPVLSKYRIEVLFWGLRDLKRVNLVAVDRPRVDIECAGKG
VQSSLIQNYKKNPNFGTLVKMFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGNHAVTTL
RKFIYRAADKHANNLNTQEEIIVNYEPEPTIKKMETMVKLDSGSDAVVKIEEDEKGGKKK
KRKKGGDEVEEEEFDESMLDWWSKYFASIETLMEILKAQEAAMADAEEKEDQDIAAEGGE
IKPDDSLVKGKRGKGKKEKKRAGPGDIPEKKKHNIDELQVYPKELENEFDNFEDWLHTFN
LFRGKAGDDDDQNMADEERIIGKFKGSLCMYKVPVSDEMQREMGFDSNMGMFQNIPTNDP
INVLVRVYIIRATDLHPADINGKADPYIAIKLGKSDIKDKDNYISKQLNPIFGKSFDIEA
TFPIDSTLTVSVYDWDLVGTDDLIGETKLDLENRYYSKHRAICGIPSKYAIHGYNVWRDP
LKPTQILAKLCKEGKLDGPHYGPGGRVKVANRVFMGPTEIDDENGLKKQTDEHLALTVLK
HWEDIPRVGCKLIPEHVETRPLLNPDKPGIEQGRIEMWVDMFPKDMPAPGPAIDILPRKP
KKFELRVIIWNTDEVILEDDDIFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGLF
NWRFIYPFDYLQAEEKIVISKKESMFAWDETEYKIPARLNLQVWDADHFSADDFLGAIEL
DLNRFPRGAKTAKQCSINMVLNEKDIPMVSIFKQMRIKGWWPFLARDENDEFELTGKVEA
ELQLMTAEEAEKNPVGEGRNEPEPLEKPNRPDTAFLWFLMPFKAIKNLICNQYFWLTIKL
VVALLLVLVLGLFIYSMPGYMAKKLMGV
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcacgtggccataagtcagaccacggaaaaggaggaagaggcgatgaggca
gccatcttggagacagaggacctggacttcatgggagggatgggagggggagggggtcct
gaccccgacaccatctccctggcctcagtcacagccgtcaccactaatgtctccaacaag
agatcaaaaccagacattaagatggaacctagtgccgggagaccaatggatttccaagtt
agtgttaccgtcatagaggccaggcagctagtagggctgaacatggatccagtggtctgt
gtggagatcggagacgataagaagtacactcagatgaaggagtcgacaaactgcccatac
tacaatgaggtaaccaatctgccctggaatgatgagtttcatgataaggaggatgaggtt
gatgaggagaatgatgatgatgatgataacaagtattttgtctttgacttccacgtccca
tctgatgttatgtttgacaagatcctgaagctgtcggtaatccactccaagaacctcctg
cgtagtgggactctggttggctctttcaaactggatgtaggcaccgtctactcgcatcca
gaacaccagtttttccacaagtgggcctttctctctgaccctgatgacatcactgccggt
tgcaaaggttacattaaatgtgacatcgccgtcgtggggaaaggagacaacatcaagact
ccacacaaggccactgaaaccgatgaagatgacgtagaaggtaacctcctgttacctgag
ggggttcccgcggagcgtcagtgggctcgctactatgtgaagatctacagagctgagggc
cttcccaagatgaacaccagcattatggctaatgtcaagaaggctttcattggggagaac
aaggaccttgtggacccttatgtacaaatactctttgctggccagagggggaaaacgtct
atccagaagagcagctacgagccaatctggaacgagcagatcgtcttcactgagatgttt
ccaccgctctgcaaacgcatgaaggtccagatccgagactcggacaaagtgaacgacgtg
gccctcggaacacacttcattgacctgagaaagatcgccaatgatggagacaaaggcttc
cttcccaccctgggtccggcttgggtgaacatgtatggctccactcgtagctacaccatc
atggacgagcaccaggacctgaacgagggtctgggggagggggtgtccttcagagcccgc
ctgctggtcagcctgggtgtggagatcctggacacctcctccccggatatcatgagctcc
accgaggtgcaggtggagggggtgcctaacatctcagagagcgccacagggaaagtagag
gagttcttcctcttcggggtgttcctggaggccaccatgattgacaggaagatcggggac
aaaccaatcagcttcgaggttacgatagggaactatgggagcgaaattgacggcgtgacc
aaacccaagtcgggtagcgggaaaaggagtgggggagacggagatgaagaggagtcagag
ctgatccaaggctccagtgatgaagaggagggggatgataatgacctggtctccgtgtcc
tccaccccgcccatgaaaccggtcatcaccgatagaaactatttccacctgccgtacttt
gagaggaagccgtgtatttatatcaagagctggtggcaggaccagagaagaagactgtac
aatgccaacatcatggacaacatcgcagataaactggaggagggtctgaacgatgttcag
gaggtcattaagacagagaaggcctatccggaacgcagactgagaggggtcctggaggat
ctcggcaacggatgcagtcaatttctgactctggctaacaaagaccagaatcagactggg
aggaccaagctggacaaggagagactcaagtcctgcatgagggagctggagagcataggt
cagcaggctaagaccatcaggacgcaggtgaagaagaacacagtgagagataagatcaag
ctggttcagaacttcctccagaagctcaggttcctcgctgatgagccgcagcacagcatc
ccggacatctacatctggatgatgagtaacaacaagcgtattgcctacgcccgtgtcccc
tccaaagacatcctgtactccggggtggacgaggagaccgggaaggactgtggcaaagtc
aaaaccatcttcttcaagctacctggtaagaagggctttggggcagctggctggacagtg
caggctaagacagagatctacctgtggctgggtctgaaccgtcagcggaaggacttcctg
tctgggctgcccaacggcttcgaggagaacaagatgctgaaaggacctggctcgcagtct
gctccccccatcagcctcacatacacgatgaagcagatcttccagctgagggtccatatg
taccaggctcgcagcctgtttgcagcagacagcagcggcctctcagaccccttcgccagg
gtcttcttctccacacacagccaggtcacagaggtgctgaatgagacactgtgccccacc
tgggaccagctgatggtgtatgacaacgtagaactgttcggagaagtcggagaactgagg
gacgacccgcctatcatcgtcatagaaatctatgaccaggacacggtgggcaaagcagag
ttcatgggcaggaccttcgccaagcctataaccaagatggcggatgaacactacggacct
ccacgtttccctccccaactagagtactaccagatctatagggggaactgcgccgctgga
gaaatgctggcggcctttgaactgctgcagattggtcctcatggtaaagctgacctgccg
cccatcgacggtcccacagacatggaccgtggtcccatcctacctgtccctctgggcatc
agaccagtcctcagcaagtacaggatcgaggtgctgttctggggcctgagggacctgaag
agggtcaacctagtcgcggtggacaggcctcgtgtggacatagaatgtgccggtaaagga
gtccagtcttccctcatccagaactacaagaaaaatcccaacttcggcactctggttaag
atgtttgaggtggatctgcctgagaacgagctgctccaccctcccctgaacatcagggtg
gtggactgcagagctttcggtcgttacaccctggtggggaaccatgctgtcaccacccta
cgcaagttcatttaccgggcagcagacaagcacgccaacaacttgaacactcaagaggag
atcattgtcaactatgagccagagcccaccatcaagaagatggagaccatggtcaagctg
gactctgggtctgatgctgtggttaaaatcgaggaggatgagaaaggagggaagaagaag
aaaaggaagaagggaggagatgaggtggaggaggaggagtttgatgaaagcatgttggat
tggtggtccaagtactttgcctcgatcgaaactctgatggagattctcaaggctcaggag
gcagctatggcggatgctgaggagaaagaggaccaggatattgctgctgagggcggagag
atcaaacctgatgactctcttgtcaaaggaaagagaggcaagggaaaaaaggagaagaag
agggctgggcctggagacataccagagaagaaaaagcacaacattgatgagctacaggtg
taccccaaggagctggagaatgaatttgataactttgaagactggcttcacaccttcaac
ctgttcagagggaaggccggagacgacgacgaccagaacatggcggatgaagaaaggatt
attggcaaattcaaaggttctctgtgcatgtacaaagtgccggtgtcagatgagatgcag
cgggagatgggctttgactccaacatgggcatgttccagaacattccaactaatgaccca
atcaacgtcctagtccgggtctatatcatcagggctactgacctgcacccagcggatatc
aatggaaaagcagatccatacatcgctatcaaactgggcaagtccgatatcaaagacaaa
gataactacatctccaaacaactcaaccctatctttggcaaatcctttgacatcgaggcc
acatttcccatcgactccacactaacagtgtccgtctatgactgggatttagtgggcact
gacgacctgattggggagactaaactggatctggagaaccgttactacagcaaacacaga
gcaatatgtggcatcccatctaaatatgccatccatggctacaacgtgtggcgggacccc
ctgaagccgacccaaatcctggccaagctgtgtaaggagggtaagctggacgggccccac
tacggccctggaggacgggtcaaggtggccaaccgggtcttcatgggcccaactgagatc
gacgatgaaaatggtctgaagaagcagacggatgagcacctggccctgacagtgctgaag
cactgggaggacatccccagggtgggctgtaaactgattccagaacatgtggagaccagg
ccactcctcaatcctgacaagcctgggatcgaacaggggaggattgagatgtgggtggac
atgttccccaaggatatgcctgcacctggacctgccattgatattttacccaggaaacca
aagaagtttgaactgagggtgatcatctggaacacagacgaggtcattctggaggatgat
gacatcttcactggagaaaagtccagtgatatcttcgtgcgaggctggctgaaaggtcag
caggaggacaagcaggacacagacgtccactaccactccctgacaggggagggtctcttc
aactggcgcttcatctacccctttgactacttgcaggccgaggagaagatcgtcatctct
aagaaggagtccatgttcgcctgggacgagactgagtataagatccctgctcgtctcaac
ttacaagtctgggatgctgatcacttctctgcagatgattttttaggcgccattgagcta
gacctgaaccgtttccctcgtggagcgaagacagccaagcagtgttccatcaacatggtg
ctgaatgaaaaggatattcccatggtgtccatcttcaaacagatgaggatcaagggctgg
tggcccttcctggccagagatgagaacgacgagtttgaactcacggggaaagtggaagcc
gagctgcagctgatgactgcagaggaggctgagaagaacccagtaggggaaggacgcaat
gaacctgagcccctggagaaacccaaccgtccagacacagccttcctatggttcctcatg
cctttcaaagccatcaaaaacctcatctgcaaccagtacttctggctcacgatcaagtta
gtggtggccctgctgctggtgctcgtcctgggcctcttcatctacagcatgcctggatac
atggccaagaaactaatgggtgtctga
DBGET
integrated database retrieval system