Oncorhynchus mykiss (rainbow trout): 110498830
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Entry
110498830 CDS
T07259
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04140
Autophagy - animal
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110498830
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110498830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110498830
Membrane trafficking [BR:
omy04131
]
SNARE
SNARE associated proteins
Others
110498830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_11
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
110498830
NCBI-ProteinID:
XP_021431149
Ensembl:
ENSOMYG00000010027
UniProt:
A0A8C7VGC2
LinkDB
All DBs
Position
20:complement(4730955..4756582)
Genome browser
AA seq
1063 aa
AA seq
DB search
MLATQTPDTGPEAEDVKQWIKEKLAWSLKALQKRYVMTDAVVTSEDGDANLLCSSLEAVF
IHGIKSKYVRSKSGGHGRKGGSRGPLPQPVFWSLLKTVTHRDVITELEKLSFVGTEVGRC
RAWLRLALNHGLMECYLASLFREGSNLQAYYQPSALLLDPEEREVLLSYIQGLASLVFNL
SYKSAVLNEWTTTPLALAGLCPTTQADAVNLPSLTKHKDSWDTVSLSSGGSDTVEVQHVG
AGVLGRVIGGVSGGRTPLNSSNLSLDTTGSSQLSSSLSSDPKSPDKDPWPCELEISAGLE
NDVNAKRPLKDDLADFRESANFSQDSMHEDLYVSTPGADHLSENTASSSSDGEAPGPFTP
LTGSSNPASVGSDQEEPSTKTHVPSEVYSHTEVPSNHSDCVERTAITSHMPVTETPQEKK
TEDSAKSTSAPSAHTNLCLTTSVHSRRMSTDSITHSHSWISEDDIYKPHLEGLVDPDESL
LGSGPACVNGLTSPPPEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGAVGLWRDY
YCELSPFEFRLYLNAEERTCCDNCSLLRCEDARVTSAEGRFDLAFPGKRLHLRAANHDEA
EDWVDRIAEAVSKCRPLHLLDDHSEVLQPTDSFVILEEPPKSSPSSPSVPTSPEQGGTVV
EQEQQPPFELDWTRPTDPESDAIKEAVLYLSQDAEARNWTPLVFSLSLETLNGFRVQDGR
KVLCCSHPIEGIRDVVPDVSLGGPAFFRVVTTGDTLKLRAKSPEEARAWRGLIRGALDSY
LESGENGEPNSPGLATGAGGNIHRLVQHRLKAGGVLLAHLYTVPTEKGLDLQGFKCAGCP
KLVGVSRGKARLCEFSGKYYCDACHQGDVIAIPSRMVHNWDLTPREVSRQALELLAQVEH
EPLLNLHLLNPNLWEHVEAMAQAHSLRQRLQLVGKYLLTCRSGPCKNIQTRLGLRTYLLE
SSHLYSVMDLQQIAEGTYVAYLNMLILFASNHVEQCDLCTQRGYICQICHASDIIFPFQF
DTTVRCKECKAMFHTSCKAESSSCPRCLRLQRYLESDLQDCSV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgctagccacacagaccccagatacggggccagaggcagaagacgtcaagcagtggatc
aaagagaagttggcatggtcactcaaggctctgcagaagcgctacgtgatgaccgatgcc
gtggtaaccagtgaggatggcgacgccaaccttctgtgctcttctctggaggccgtcttt
atccacggcatcaagagcaaatatgtccgctccaagtccggaggacatggcaggaaaggg
gggtcccggggacccctcccccaacctgtgttctggagccttctcaagacggtcactcac
cgtgacgtgatcacggagctggagaagctgagctttgtgggtacggaggtgggtcgctgc
cgggcttggctgcggctggccctcaaccacggcctgatggagtgctacttggcctccctg
ttccgtgagggctccaatctgcaggcctactaccagccctccgccctgctcctggaccct
gaggagcgtgaggtgctgctcagttatatccagggcctggcctccctggttttcaacctt
tcgtacaagtcagccgtgctcaatgagtggaccaccaccccactggctctggccggcctc
tgccccaccacccaggccgacgctgtcaaccttcccagtctcaccaaacacaaggattct
tgggatacggtgtcactgtcgtccggcgggtcggatacggtcgaagtgcagcatgtgggg
gcaggggtgctagggagggtgattggtggagtctcagggggtaggacccctctgaattct
tctaatttgagcctggacaccacagggtcatctcagctctcctccagcctaagctcagac
cccaagagcccagacaaggatccctggccatgtgaactggagatctctgccggactggag
aacgatgtcaatgccaagaggcctcttaaagatgatctggcagacttcagggagagtgcc
aacttcagtcaggactccatgcacgaggatttgtacgtttccactccgggtgcagaccac
ctctcagagaatacggcctccagcagctctgatggcgaggccccggggccattcacaccc
ctcactggctcctctaaccctgcttccgtggggtcagaccaggaggagccgtccactaag
acccatgtcccttccgaagtgtactcgcacactgaagtgccctccaatcacagtgactgt
gtggagagaacagcgataacttctcacatgcctgtcacagagacgccacaggagaaaaag
acagaagattccgctaagagcacctcggcgccttcagcccacacaaacctatgccttact
accagtgtgcatagcaggaggatgtctacagactcaatcacgcattcccactcctggatc
tctgaggatgacatctataagccacaccttgagggactggttgaccccgatgagtcatta
ctagggtctggcccagcttgtgtgaatggattgacctctccccctccagagcctgagact
ccccagtctccccccagcgtggttcaccgcaggcagataggcctgtccaaccctttccgt
gggctgctgaagctgggccatctggagcggcggggggctgtgggcttgtggcgggactac
tactgcgagctctcgcccttcgagttccgcctctacctgaacgcagaggagcgcacctgc
tgtgacaactgctccctgctgcgttgcgaagacgcccgcgtcacctcggccgagggccgc
ttcgacctggccttcccagggaagaggctccacctgcgggcagccaaccacgacgaggca
gaggactgggtggaccgcatcgcagaggccgtcagcaaatgccgcccattgcacctcctt
gacgaccattcagaggtgctgcagcccactgacagctttgtcatcctggaagagccccca
aaatcttccccttcgtccccctccgtacccaccagccctgagcaagggggtactgtggtt
gagcaggagcagcagccgccatttgagctagactggacgcgtcccacagaccctgagtca
gacgccattaaggaggcggtgctgtacctatcccaggacgcagaggctcgcaactggact
cctctggtcttctccctctccttggagactctcaacggcttccgggtacaggatgggcga
aaggtgctgtgctgctcccaccccatcgaggggatacgggacgtggtcccagatgtttct
ctggggggaccggccttctttagggtcgtaacgaccggagatacgctcaagctgagggcc
aagagccctgaggaggcgcgtgcctggaggggcctcatcaggggagccctggactcctac
ctggagagtggcgagaacggggagcctaatagccccgggttagccactggggcggggggg
aacatacacagactggtgcagcatagactgaaggcgggcggggtgctgctggcccatcta
tatacagtgcccacggagaagggcctggaccttcagggcttcaagtgtgcaggttgtcca
aagctggtgggggtctcccggggaaaagccagactgtgcgagttctcagggaagtactat
tgcgacgcttgtcaccagggtgacgtcatcgccataccctcccgcatggtgcataactgg
gacctcacgcctcgtgaggtctccagacaggccctcgaactgctggctcaggttgaacat
gagcccctgctcaaccttcaccttttgaaccctaacctgtgggagcatgttgaggccatg
gcccaggcacacagtctcagacagaggctgcagctggtaggaaagtacctgctcacctgc
cgcagtgggccatgcaagaatattcagaccagactgggcctaaggacatatctgttagaa
tcaagccatctctacagtgtcatggacttacaacagatagcggagggaacatatgtggcc
tacttgaatatgttgatcctgtttgcctccaaccacgttgaacaatgtgacctttgcact
cagaggggctacatctgccagatctgtcatgccagtgacatcatcttccccttccagttc
gacaccactgtcaggtgtaaagagtgtaaggcaatgtttcacacatcctgcaaggccgag
tcgtcctcctgtccacgatgcctgcgtcttcagaggtacctcgagagtgatctgcaggac
tgctctgtttga
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