Oncorhynchus mykiss (rainbow trout): 110499867
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Entry
110499867 CDS
T07259
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04260
Cardiac muscle contraction
omy04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110499867
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
110499867
04261 Adrenergic signaling in cardiomyocytes
110499867
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110499867
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110499867
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_2
MCP-like_PDC_1
DUF2201
Motif
Other DBs
NCBI-GeneID:
110499867
NCBI-ProteinID:
XP_036800847
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Position
15:complement(64481916..64636502)
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AA seq
1092 aa
AA seq
DB search
MDTYSSFTALLLLLASLNSVSTVQFPSPLLIKEWVEQMQQELVTLTDTASGVQNLIQIFQ
SHRKYFSVGSNDASQLVANAAGNIENLLANRSRALKTLASAAEDFQMWHRWKNDPEPDDI
HYYYAKENLDSNDTEVKKPNRLYPEFKEDEQFRRLISYNTTAVHIPTDIYEGSTIVLNEL
NWTDALEAVFRKNKEEDPTLLWQVFGSATGLARYFPASPWMDSRKTPNKIDLYDVRRRPW
YIQGAASPKDMLILVDASGSVSGLTLKLIHTSVNEMLETLSDDDYVNVVYFNDKAMKAAC
FQNLVQANVRNKRFLKDAVRNISAKGITNYKGGFELAFEQLSSLNVTQGRALCNKIIMLF
TDGGEERAQEIFQKYNADKKVRIFTFSVGQHNYDKGPIQWMACTNKGYYYEIPSIGAIRI
NTQEYLDVLGRPMVKANNKAKQVQWTNVYQDALELGLVITGTLPVFNKTNTKADKERGLQ
RPQNQLILGVMAIDVSLDDIKRLTPRFTFGPNGYYFAIDPNGYVLLHPNLCPKNPKFQEP
VTLDFLDAELEDEIKVEIRTNMIHGETGHRTVHTLVKSQDERYIDRSERSYTYAPVKGTD
YSLALVLPVYSLHYIHTTIGDTITQAKLELGDEVSESLQEDKFEEYGYTLIAPREYCKDL
KPSKNNTEFLMDFNEYIDRKTPNNPLCNVDLVNRLLLDAGITSDLVKQWRDQMPNGVLAR
FVATDGGITRIYPKSAGLDWTEDPETYESSFYKRSLDNDIYIFTPTPYQEDTNMTEDSVL
VSRAVNLDIDGVRLKPAVVGVKLDINTWMTNFINATLKMNCKDEICGCQRNDEHVDCVIL
DDGGFLVMANRDEYIGQIGQFFGMIDPILMVNLVNMSLFTLNKTYDYQSVCDPKRESKGS
AAGLRSVYVPTIADILNVGWLASAAAWSILQQLLVSIAFPNFLHAADTDDEIPDMSKESC
ITEQTQYFYDNEEKSFRGTLDCENCSRMFHAEKLWKTNLVFVIADAKLTCMSCDHKPLIQ
AEQPSEGPDPCEMAEKPRFRKGPDACFDNNEREEDFDCGGASALSPSLLAMVALQLALLW
LLAGSTHHAVPS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggatacctacagctccttcaccgctctacttttacttctggcttcgttaaatagtgtg
tcaaccgtgcagttcccgtcgccacttctgataaaggaatgggtggagcagatgcagcag
gagctggtcacactgacggacacagccagcggagtgcagaatctcatacagatcttccag
agccacaggaagtacttcagtgtggggtccaacgatgccagccagctggtggctaatgca
gcggggaacatcgagaatctcctggccaaccgttctcgtgctctcaagacactggcatcc
gctgcagaggattttcagatgtggcatcggtggaagaatgatcctgagcctgatgacatc
cattactactatgccaaagaaaacctggactcaaatgatacagaggtcaagaagccaaac
cggctttatccagagtttaaggaagacgagcaatttagacgcctcatctcttacaacacc
acagcagtccacatacccacggacatatacgagggctccaccattgtgctgaatgagctg
aactggacagacgcattagaggccgtgtttagaaagaacaaggaagaggatcctactcta
ctgtggcaggtgtttggcagcgccaccggattggctcgctacttcccagcatccccttgg
atggactcgcgaaaaacgcccaataagattgacctctacgacgtccggcggcgaccgtgg
tacattcagggggcggcgtctcctaaggacatgctgatcctagtggatgcgagtggcagt
gtctctggtctcaccctcaagctaatccacacctctgtcaacgagatgctggagaccctg
tctgacgatgactacgtcaatgtggtctattttaatgataaagcgatgaaggcagcgtgc
tttcagaacctggtacaggccaacgtgaggaacaagaggttcctgaaggacgctgtgcgg
aacatctcagccaagggcatcaccaactataaaggcggcttcgagttggccttcgagcag
ctctcatcgttgaacgtgacccagggcagggcgttgtgtaacaagatcatcatgctgttc
actgacggaggagaggagagggcccaggagatcttccagaagtataacgctgacaaaaag
gtgcggatattcacgttctcagtgggccaacacaactatgacaaaggaccaatccagtgg
atggcctgcaccaacaaagggtactattatgaaatcccgtccatcggtgctatcaggatc
aacactcaggagtatctggatgtactgggaaggcccatggtcaaagcaaacaacaaggcc
aagcaggttcaatggaccaacgtttaccaggacgcactggagctgggtctggtgatcaca
ggaacacttccagtcttcaacaagaccaacaccaaagctgacaaagagaggggactacag
aggccccaaaaccagctgatcctgggagtgatggctatcgatgtgtctctggacgacatc
aaaagattaacaccgagatttacatttggaccaaatggttattactttgccattgacccc
aacggttacgtcttgctgcatcccaacctctgcccaaagaatcctaaatttcaggagcct
gtaactctggacttcctggacgctgagctggaggatgagattaaagtagagataagaacg
aacatgattcatggagaaaccggccaccgcaccgtacacacactagtgaagtcccaggat
gagcggtacatagaccgaagcgaaagatcgtacacatatgcccctgtaaagggtacagat
tacagtctagccttggtccttccagtgtacagcctgcattacatccacactactatcgga
gacaccatcacccaggccaaattggaattgggggacgaggtctctgaaagcctgcaggaa
gacaagtttgaggagtatggatacactctcattgcaccaagggagtactgtaaggatctg
aagccgtctaaaaacaacacagagttcctgatggacttcaacgagtacatcgacaggaag
actcccaacaacccactgtgcaacgtggatctggtgaacagattgttgctggacgctggc
atcacatcagaccttgttaagcagtggagggatcagatgccaaatggagtcctggccagg
tttgtggccactgatggaggaatcactcgcatttatcccaagagtgctggactagactgg
acagaggaccctgagacatacgagtcaagcttctataagagaagtctggacaatgacatc
tacatcttcacaccaacaccctaccaagaggacaccaacatgactgaggactcagtcctg
gtgagcagagcagtgaacctggacattgatggagtcagactcaaaccagcagttgtggga
gtgaaactggacatcaatacctggatgaccaacttcatcaatgctactctgaagatgaac
tgtaaggacgagatctgtggttgtcagaggaatgatgagcatgtggactgtgtcatcctg
gatgatgggggattcctagtcatggccaatcgggatgaatacatcggtcagatcggccag
ttcttcgggatgatcgaccctatcctcatggtcaacctggtcaacatgtctctgttcacg
ctcaacaagacgtacgactaccagtcggtctgcgaccccaagagggagagcaaggggtcc
gcggcgggcctgcgctcagtctacgtgcccaccatagcagacattttgaacgttggatgg
ttagcatcagcagcagcctggtcgatactacagcaattattggttagcatagcattccct
aatttcttgcacgcagcagacactgatgacgaaatacctgacatgtccaaggagagctgt
atcacggagcagactcaatacttctatgacaacgaggaaaagtccttcagaggaacacta
gactgtgaaaactgctccaggatgttccatgctgagaagctgtggaagaccaacctggtg
ttcgtcatcgccgacgccaagctcacctgcatgtcatgtgaccacaagcccttaatacag
gccgagcagccttctgagggaccagacccatgtgaaatggctgagaaaccaaggttccga
aaaggtccagatgcctgtttcgacaacaacgagagggaggaggactttgactgtggtggg
gcgtccgctctgagcccgtccctgttggccatggtggcgctgcagctggccctgctctgg
ctcctggccggctcaactcaccacgccgtcccctcgtga
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