Oncorhynchus mykiss (rainbow trout): 110501447
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Entry
110501447 CDS
T07259
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04081
Hormone signaling
omy04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
110501447 (rapgef4a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
110501447 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110501447 (rapgef4a)
Membrane trafficking [BR:
omy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
110501447 (rapgef4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
Vit_b-sht_shell
Motif
Other DBs
NCBI-GeneID:
110501447
NCBI-ProteinID:
XP_036814701
Ensembl:
ENSOMYG00000010612
LinkDB
All DBs
Position
22:complement(14793734..14841276)
Genome browser
AA seq
1033 aa
AA seq
DB search
MISPKMVAAHTSGHSSASADWIICFDKRPAERSGEDVDIILARLKCVKAFERFHPSLLQQ
ICLCGFYECLEKGITLYRQGDIGTSWYAVISGSLDVKVSETANHQDAVTICTLGIGTAFG
ESILDNTPRHATIVTREFSELLRIDQREFKSLWEKYRQCMAGLLAPPYGVMESGGRSTDR
MSDKENISNNSFGSISKHLNKKSLIESPAKLRPKPISQVPSEKILRAGKVLRDAILSRAP
HMIRDRKYHLKTYRQCCVGTELVDWQMQQSSSVYSRIQAVGMWQVLLEEGVLNHVDQELT
FQDKYLFYRFLEDEQEDAPLPTEEETRESDEELQDTLLLLSQVGPDAHMRMVLRKHPGQR
AADDLEIIYEELLHIKALSHLSTTVKKELAGVLIFESHAKAGTVLFNQGEEGTSWYIILK
GSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRD
VEANTVRLKEHDQDVLVLEKSPSSIQTSTHSTTTTPSHYKYTVMSGAPEKILEHFLEMMR
LDSHLNESDPALDDFVLMHCVFIPNSQLCPVLMAHYHAEASQGSEQERLDYTLNNKRRVI
RLVLQWASVHGDHLQEEDASLAFLEEFFVSVSEDASVIPALKDQLPELEKLVKNSSDDAR
SSPQKHKVLLRQFSMGDEKLQKRQAIKSNDEILFKVYCSDHTYTTIRVTVAASVREVISA
VADKLGSAEDLLLVNLSSAGDKVVLKPNDISVFSTLSINGRLFVCPRDQLDSLTPLPEQE
GPSTGSMGSFELMSSKDLAYQMTVYDWELFHCVHEHELIYHTFGRQNFKKTTANMDLFLR
RFNEIQLWVITEICLCAQLSKRVQMLKKFIKIAAHCKEYKNLNSFFAIIMGMSNPAVSRL
SQTWEKLPSKFKKFYNEFESLMDPSRNHRAYRLTVAKLDPPIIPFMPLLIKDMTFTHDGN
KTFIDSLVNFEKMRMIANTVRIVRYCRSLPFGAEPSQTSKNHPDVRSYVRQLTVIDNQRT
LSQLSHRLEPRRT
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgatctctccgaaaatggtagcagcgcacacctctggccattcctctgcctctgcagat
tggattatttgctttgataaaagacctgctgaacgctctggggaagatgtggacatcatc
ctggccaggctgaaatgtgtgaaggcctttgagcggttccaccctagccttctacagcag
atatgcctgtgtggattctacgaatgtctagagaagggtatcacattataccgtcaagga
gatattggtaccagctggtatgctgtcatctctggctcacttgatgtcaaagtgtcagag
acagcaaatcatcaggatgctgtcacaatctgcactctgggtattgggacagcatttggg
gagtcgatcctggataacacccctcggcacgccaccattgtcacccgggaattcagtgaa
ctcctccgcatcgaccagagggagttcaagtctctgtgggagaaatatcgtcagtgcatg
gctggactgcttgccccaccctatggagttatggaaagtggtggacgtagcactgacaga
atgtctgacaaagagaacataagcaacaactcttttggatccatctctaaacatctgaat
aagaagtcattaattgaaagcccagccaaactccgtcctaaacccatttctcaggtccca
tctgagaagatcttgcgagcagggaaggttctccgtgatgccatcctctccagagctccc
cacatgatccgagacaggaagtaccacctgaagacatacaggcaatgctgtgtgggaaca
gagctggttgactggcagatgcagcagagctcctctgtttactctcgcattcaagcagtg
ggcatgtggcaggtgctgttagaggaaggtgttctcaaccacgtggaccaggagctgacc
ttccaggacaagtatcttttctaccgtttcctggaggatgaacaggaagacgctcccctg
cccaccgaggaggagaccagggagagcgatgaggagctgcaggacaccctcctcctcctc
tcccaggtcggccctgacgcccacatgcgcatggtcctgaggaaacatccaggacagagg
gcagccgatgatttggagatcatttatgaggagctgcttcatataaaggccttatcgcac
ctatccaccactgtaaagaaagaactagccggcgtcctgatctttgagtcccatgccaaa
gcaggaacagtcttgttcaatcaaggggaggaaggcacatcgtggtacatcattctaaag
ggctctgtaaacgttgtcatttatggaaagggggttgtttgcacgctgcatgagggagac
gactttgggaagcttgctctggtcaacgatgccccccgtgccgcctccattgttctacga
gaggataactgccacttcctacgtgtggacaaggaggacttcaaccggatcctcagagac
gtggaggccaacacggtgcgtctgaaggaacatgatcaggatgttcttgtcctggagaag
agccccagcagcatccagacctctacccacagcaccaccaccaccccctcccactacaaa
tacactgtgatgtcaggggcaccagagaagattctggagcacttcctggaaatgatgcga
ctggactctcacctcaacgaatcagacccagctctggacgactttgtgctcatgcactgc
gtcttcatccctaacagccagttgtgcccggtgctcatggcccactaccacgctgaggcg
tcccagggctcagaacaggagcgtctggactacactttgaacaacaagaggagggtgatc
aggctggtgctccagtgggcctcagtacatggagatcaccttcaggaggaggatgcctca
ctagccttcctagaggagttctttgtgtctgtatctgaggatgccagtgtgattcctgct
ctgaaagatcaactcccagagttagagaagctagttaaaaacagctctgacgatgccaga
tcctctccacaaaagcacaaagtcctgttgcggcagttcagcatgggggatgagaagctg
cagaaacgacaggccatcaagagtaatgatgagatcctgttcaaagtgtactgcagcgac
cacacctacaccaccatccgggtcaccgtggccgcctcagtcagagaggtcatcagcgca
gtggccgacaagctggggtcagcggaggacctcctcctggtcaacctcagttcggccgga
gataaagtggtgctgaagcccaacgatatttcagtcttctctacactcagcatcaacggc
cgtctgtttgtctgccccagggatcaactggattcattgacacccttgccagagcaggaa
gggccctccactggctccatgggcagctttgagttaatgagctcgaaagacctggcctac
cagatgactgtctacgactgggaactcttccactgtgtacacgagcatgagctgatctac
catacgtttgggaggcagaacttcaagaagaccacagccaacatggacctgttcctcagg
aggttcaatgagatccagctgtgggtgatcacagagatctgtctgtgtgctcagctcagc
aagcgcgttcagatgctcaagaagttcatcaagatcgctgcccactgtaaggagtataag
aacctcaactccttcttcgctatcatcatgggcatgagcaacccagccgtgagcagactg
agtcagacctgggagaaactacccagcaaattcaagaaattttacaatgaatttgaaagc
ttaatggacccgtccaggaaccatcgggcgtaccggctcactgtggccaagctggaccca
cccatcattcccttcatgccgctgctgatcaaagacatgacattcactcatgatggaaac
aagacgttcattgacagtttggtcaattttgagaaaatgcgaatgatcgctaatacagtg
aggattgtgagatactgcagaagtctaccattcggtgcagagccgtcgcagaccagtaag
aaccacccggacgtgcggagctacgtgcgccagctgactgttattgacaaccagagaaca
ctgtctcagctctcccatagactggagcctcgcagaacctga
DBGET
integrated database retrieval system
