Oncorhynchus mykiss (rainbow trout): 110501538
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Entry
110501538 CDS
T07259
Name
(RefSeq) T-cell surface glycoprotein CD4-like
KO
K06454
T-cell surface glycoprotein CD4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03250
Viral life cycle - HIV-1
omy03260
Virion - Human immunodeficiency virus
omy04060
Cytokine-cytokine receptor interaction
omy04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110501538
03260 Virion - Human immunodeficiency virus
110501538
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110501538
04514 Cell adhesion molecules
110501538
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
omy04090
]
110501538
CD molecules [BR:
omy04090
]
Proteins
110501538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
I-set
Ig_2
Sp38
SH3_3
Motif
Other DBs
NCBI-GeneID:
110501538
NCBI-ProteinID:
XP_036803892
Ensembl:
ENSOMYG00000034801
LinkDB
All DBs
Position
2:39403821..39410519
Genome browser
AA seq
487 aa
AA seq
DB search
MNSGFLSIVIALFISSTGAEDVVYGQVGGTVTLPRLKWGSDKVTVQWYFGMDQKSLIFRN
TQGREIIDPEWKDRLSLSKTDFSLIINKIRLEDFKSFKCELKDFSPKQITLITTFRLSRV
SVQPVSPLLAGKNLNLKCDIKEIIEGTQRRWLSPQKQDLNKDKRAQIGNNGGLTVMNVTG
QDNGEWTCVVTYQGREAYANTPVTVIDLSPAHPQPIYTSVSSLSLLHLPCFFSIPLPLSW
SDSQEKGIQGGRWTFTPSPAAGSLTGVVQTLVNLSPGPPLAWVANQKRGLDVSALQRKNL
NLSLSKKGVTEGDRGDYTCAVEFQRGDTLKREMRVEVLQVFTSPGPVAFLGQEVNLTCTL
GQPLTSDLEVKWIPPHHSSLLPLDSSPHPTLLTIPEATYGNGGRWRCELWRNKTKLTSVE
ITLKIERVPMDVWLLVTICAAAVIFILLLILTVILIRRHRQRVMMPRRGKRRFCNCQDPK
PKGFYRN
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaattctggattcctttccatcgttattgctttgttcatctcttcaacaggggctgaa
gatgtggtgtatggtcaggtgggagggacggtcacactccccagattgaagtggggttca
gataaggtgacggtacaatggtactttgggatggaccaaaaatctttgatattccgcaat
acccagggtcgagagataatagatccagagtggaaagacaggctgtctctgtccaagact
gacttctccctgatcatcaacaaaatcagactggaggacttcaaatccttcaaatgtgaa
ctgaaagatttcagcccaaaacaaattaccttaatcaccacattcagactgtcccgtgtg
agtgtacagccagtctctcccctgttggctgggaagaatcttaatctgaagtgtgacata
aaggaaataattgaggggacacagagaagatggcttagtccccagaaacaggacctgaac
aaggacaagcgtgcccagattggaaataacgggggcctgaccgtaatgaatgtcacaggc
caagacaatggagagtggacctgtgtggtgacataccagggcagggaagcctatgccaac
acccctgttactgtaatagacctctcccctgctcatccacagcctatctacacctccgtc
tcctccctctctcttctccatctgccatgtttcttttccattccgcttcctctatcctgg
tcagacagccaggagaagggcatccagggaggccgctggacctttaccccaagcccagcg
gcaggctccctcactggggtcgtccagaccctcgtcaacctctccccggggcctccatta
gcctgggtggccaatcagaagagagggctggatgtctcagccctgcagaggaaaaatcta
aacctctccctgtcaaagaaaggggtgacggagggggacaggggcgactacacctgcgct
gtggagttccagaggggggacaccctgaagagagaaatgcgtgtggaggtgctacaggtg
tttacctctccaggtccagtggcctttttaggtcaggaggtcaacctcacctgtaccctg
ggccagcctctgacctctgacctggaagtgaaatggatcccaccacatcactcctccctc
ctccctttagactcctccccccaccccacccttctcaccatccccgaagcgacgtatgga
aatggtgggaggtggaggtgtgaattgtggaggaacaaaaccaagctgacgtcagtggag
attactctgaagatagagcgagtccccatggacgtgtggctgttggtcaccatctgtgcc
gcagccgtcatcttcatcctcctcctcatcctcactgtcatcctcatccgacgccacaga
cagcgggtgatgatgcccagacgtggcaaacgcagattctgcaactgccaagaccccaaa
ccaaaaggattctacagaaactag
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