Oncorhynchus mykiss (rainbow trout): 110501543
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Entry
110501543 CDS
T07259
Name
(RefSeq) C-X-C chemokine receptor type 4
KO
K04189
C-X-C chemokine receptor type 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03250
Viral life cycle - HIV-1
omy03260
Virion - Human immunodeficiency virus
omy04020
Calcium signaling pathway
omy04060
Cytokine-cytokine receptor interaction
omy04144
Endocytosis
omy04672
Intestinal immune network for IgA production
omy04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110501543
03260 Virion - Human immunodeficiency virus
110501543
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
110501543
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110501543
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110501543
09142 Cell motility
04810 Regulation of actin cytoskeleton
110501543
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
110501543
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
omy04030
]
110501543
04050 Cytokine receptors [BR:
omy04050
]
110501543
04090 CD molecules [BR:
omy04090
]
110501543
G protein-coupled receptors [BR:
omy04030
]
Rhodopsin family
Chemokine
CXC Chemokine
110501543
Cytokine receptors [BR:
omy04050
]
Chemokine receptors
CXC Chemokine
110501543
CD molecules [BR:
omy04090
]
Proteins
110501543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
CXCR4_N
Motif
Other DBs
NCBI-GeneID:
110501543
NCBI-ProteinID:
XP_021434867
Ensembl:
ENSOMYG00000012633
LinkDB
All DBs
Position
22:complement(19034465..19036509)
Genome browser
AA seq
357 aa
AA seq
DB search
MSSYYETIIFYNDNSSEESGDYDLGYEEPCNRVSGDDFQRIFLPTVYGIIFLLGIVGNGL
VLIVMGYQKKVQTKTDKYRLHLSVADLLFVLTLPFWAVDAASSWYFGGILCTAVHVIYTI
NLYSSVLILAFISMDRYLAVVHATKSQSTRTFLADRVIYVAVWLPAVILTVPDMVFATAQ
NRVSRTICQRIYPQETSFYWVAGFRFQHILVGFVLPGLVILTCYCIIIAKLSQGSKGQVL
KRKALKTTVILVLCFFSCWLPYCVGIFVDTLMLLNVISHSCALEQSLQTWISITEALAYF
HCCLNPILYAFLGVKFKKSARNALTVSSRSSHKILTKKRGPISSVSTESESSGALSS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttattacgagaccatcattttttacaacgacaacagctcggaagaatcaggg
gattatgacttgggctatgaggagccgtgcaacagagtcagtggtgatgattttcaaagg
atcttcttaccgacagtttacggaataatattcctgttaggtatcgtcgggaatggactg
gtattgatagtgatgggctaccagaaaaaggtccaaacgaagactgataaatacaggctg
catctctcggtggccgacctcctattcgtcctcacgctacctttctgggcggtggatgcg
gccagcagttggtactttggcggtatcctctgtaccgctgtgcatgtgatctacaccatc
aacctgtatagcagcgtcctcattctggcctttatcagtatggacaggtacctggcagtg
gtgcatgccaccaagagtcaaagcaccaggacgtttcttgcagacagagtgatctatgta
gctgtatggctacctgctgtgattctcaccgtgcctgacatggtgtttgccacagctcag
aatagagtctccagaaccatctgtcaacgcatctacccccaggaaactagcttctactgg
gtggcggggttccgtttccagcacattctggtaggctttgtccttcccgggttggtcatc
ctcacctgctactgcatcatcatcgccaagctgtcccaggggtccaagggtcaggtgttg
aagagaaaggctctcaagaccactgtcatccttgtcctgtgcttcttcagctgctggctg
ccatactgtgtggggatcttcgtggacaccctgatgttgctcaatgtgatctcccatagc
tgtgccctggagcagagtctgcagacttggatctcaatcacagaggctctggcatacttt
cactgttgtctcaaccctatcctttatgctttcctgggtgttaaatttaagaaatctgcc
cggaatgcactgactgtcagcagtagatcaagtcataagatactgacaaaaaagagagga
cccatttcatctgtgtctactgaatctgagtcttcaggtgccctgtccagttaa
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