Oncorhynchus mykiss (rainbow trout): 110502095
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Entry
110502095 CDS
T07259
Name
(RefSeq) zinc finger protein GLI2
KO
K16798
zinc finger protein GLI2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110502095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110502095
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
110502095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
110502095
NCBI-ProteinID:
XP_036815070
Ensembl:
ENSOMYG00000027133
UniProt:
A0A8K9VCS1
LinkDB
All DBs
Position
22:35943510..36060137
Genome browser
AA seq
1510 aa
AA seq
DB search
METSALTATEKKEHTGSGLDGGSFSDLPKKPSPTTVTRGPHHLFPTFHTPIPIDMRHHEG
RYHYEPHPLHTMHGPQGLASSPVISDCISLIRLSPQAAGTGESPFSPPHPYINHHMEHYL
RSMHSSPTLSMISAARGLSPAEVTHEHLKERGLFSLPPPPPGANPTQYYHLMASGRSTYG
DLLLQTGAAAAAAAAAAHLPDYIGPVDVSRFSSPRLTPRLNRKRALSISPLSDASIDLQT
MIRTSPNSLVAYINNSRSSSAASSSYGHLSVSGISPSFTFPHSINPMAYQHLFNQQRGLS
AFGHTPPLIQPSPSFAARQHAHAIAASALNTTHNTSSSESNQNAGGDPAVSSTVNPMITK
RHKVKTEAEGPRSISPCSQEHVLDLSEERDKDEWKQEPEAVYETNCHWDGCTKEYDTQDQ
LVHHINNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKA
YSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTK
RYTDPSSLRKHVKTVHGPEAHVTKKQRGDVPPRGPPKGNGENEANAKQSDRGIDGKMEAN
SITRGVEDCLQVKSIKTENSMTYQSSPGGHSSCSSEPSPLGSAHNNDSGVEMALHSGGSF
GELSALDDAPMVDSSTLSHGNSAGVGLGLRKGGGITIKLENIKKERLKNVRDSCPWANSG
PQIRNTNTKLPPIPAVGSLLENSNMIASPGPYPGQRLGDLSSCEVTMLNQLNEQGRRYSN
TSTASSAYTSRRSSGISPCYSSRRSSEASQFSNRHNNISSADSYDPISTDLSRRSSEASQ
CGGVGGNGPSLLSLTPAQHYHLKAKYAAATGGAPPTPLPNMERMSLRTRMALYGDHSQER
ESSSNSNLFQPPAGAVPRRCSDIGYSNHSMMPHEVPGNLPRRASDPVRRPTLDPLSLPRV
QRYNSMNSMNPNSMMPPPSTDRRGLAMQGYTRSDGSLHRHPFTPRPPSISENVVMETMAV
DGLDHAGDEDMVLPDDVVQYLRSQNTGAGQSAGPVDYTNSQSHGFQVQGNMTSSQQPQQQ
FYGQRRMAMVDTNMPLSESGQAPLTLYKMSPGSGSQQQQYPTSPRMNNKNNMPVQWNEVS
SGTVDATGTSRLTKQNLLRNNNLAVVQQRQNCGPFQGSMGSNSNQQVMPMSQNMELQGYT
QRSNAQRINSVQQQQRQPCSMNYTEQMSPQQGYGQDIVPIPNSGSGNGSLRPNYNGMALP
NGRVMATHNPDIQNYRSRTQVESYPLHMNQVEQLNYSSTPQQQAVHTGTRDGMQPRLPME
TKSMSRQHVRSSSTMQNRFLQSDFNHNTSEASPKKPGRTAAHNVGQKGNSNSNAPMLYTG
QIHMFESNNNLSFDSPMSPCTPQALVGTAVTMVSPGVNQVTSTVDSSGVEHAQIDFDAML
DDGDHSSLMSGTLSPGLLTSLSQNSSRLTTPRSSVTLASVPAGIGNMAIGDMNSMLTALA
EESKFLNMMS
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggagacctctgcccttacagccactgagaagaaggagcacacaggatcaggtctggat
ggaggcagcttctcagacctgccaaagaaaccgtctcctactacagttaccagaggtcct
caccatctcttccccacgtttcacacaccaatcccgatcgacatgcgtcaccatgagggg
aggtaccattacgagccacaccccctccacaccatgcatggacctcaaggcctagccagc
agcccagtgatctcagactgcatctctctgatccgtctgtcccctcaggcagcagggacg
ggggagtcccccttcagcccccctcacccctacatcaaccaccacatggagcactacctc
cgctccatgcacagcagccctaccctatccatgatctcagctgcccgtggactcagcccc
gcagaagtgacccatgagcacctgaaggagcgtggtctgttcagcctgccccctccccct
ccaggggccaaccctacacagtactaccacctcatggccagtggcagaagcacctacgga
gacctcctcttgcagaccggggcggccgcggcagcagcagccgcagcagcacacctgccc
gactacatcggccctgtggatgtgtccaggttctccagccccagactgacccccaggctg
aacaggaagcgagccctgtccatctcccctctctcagacgccagcatcgacctgcagacc
atgatccgtacctcgcccaactccctcgtggcttacatcaacaactcacgctccagctct
gcagccagcagctcctacggacacctgtcagtcagcggcatcagtccttcgttcaccttc
ccccactccatcaaccccatggcataccaacatctgttcaaccaacagagaggcctgagt
gcgttcggccatacccctcccctcatccagccctcgccctccttcgctgcccgccagcat
gcccacgccattgcagcctccgccctcaacaccacccacaacacctccagctctgagtcc
aaccagaatgctggtggtgacccggcggtgagcagcacagtcaatcccatgatcaccaag
aggcacaaggtcaagacagaagcagagggaccccggtccatatcaccgtgctctcaggag
catgttttggacctgagtgaggagcgggataaagatgagtggaagcaggagccagaggct
gtctacgagaccaactgtcactgggacggctgcaccaaggagtacgacactcaggaccag
ctcgttcaccacatcaacaacgaccacatccatggggagaagaaagagtttgtgtgccgt
tgggatgagtgctcgagagaacagaagcccttcaaagctcagtacatgctggtggtccac
atgaggagacacactggggagaagccacacaaatgcacatttgaaggttgctgtaaggcc
tactctcgcctggagaacctgaagacccacctgaggtcccacacaggggagaagccgtac
gtctgtgaacatgagggctgcaacaaagccttctccaacgcctcagacagagccaagcac
cagaaccgcacacactccaatgagaaaccctacatctgtaagatccctgggtgcactaaa
cgctacacagaccccagctctctcaggaagcatgtgaagacggttcacggaccagaggcc
cacgtcaccaagaaacaacgtggcgatgtgcctcccaggggtcctcccaagggaaatgga
gagaacgaggcaaatgccaaacagagtgatagagggatagatggaaagatggaggccaac
agcattactagaggagtggaggactgcctgcaggtcaagtcaatcaagaccgagaactca
atgacgtatcaatccagccctggcggtcactcgtcatgtagcagtgagccatcgccactt
ggcagtgcccacaacaatgacagtggagtagagatggccttgcacagcgggggaagcttt
ggggagctgagtgcactggatgacgctcccatggtggactcctccaccctctcccacggc
aactcagcaggggtggggcttgggctccgtaaagggggaggaatcaccatcaagctggag
aacatcaagaaggagaggctgaagaatgtgagggattcgtgtccctgggccaactctggt
ccacagatccggaacaccaacaccaagctgcctcctattcctgctgttggttcccttctg
gagaactccaatatgatcgcttcacccgggccctaccctggtcagcgtcttggtgacctg
tcatcatgcgaggtgaccatgctaaaccagttgaatgagcagggccgccggtacagcaac
accagcactgccagttcagcctacaccagccgccgctcctcgggcatctccccctgctac
tccagccgccgctcttctgaagcttcgcagttcagcaaccgccacaacaacatcagttca
gccgactcctacgaccccatctccacagacctgtcccggagatccagcgaggccagccag
tgtggaggggttggtggaaacggccctagtttgctcagcctcaccccggctcagcactac
catcttaaggccaagtatgctgccgcaaccggaggagctccacccacacctctgcccaac
atggagcgcatgagcctcaggaccaggatggctctgtacggggaccactcccaggagagg
gagagctcctccaattccaacctgttccagccccctgctggagcagtgcccagacgctgc
agcgacattggctacagtaaccatagtatgatgccccacgaggtccctggtaacctgcca
cggcgagccagcgatcccgtccgcagacctaccttggacccactgtccctgcccagggta
cagcgctacaacagcatgaacagtatgaaccccaactccatgatgcctcctccctctact
gatcgccggggcctggccatgcagggctacacacgatccgacggaagtctgcaccgccac
cctttcaccccgcggccccccagcatctcagagaatgtggtgatggagaccatggctgtg
gacgggctggaccatgcaggggacgaggacatggtgctgcctgatgatgtcgtacagtat
ctcaggtctcagaacactggcgccggccaatcagcaggccccgtcgactacaccaacagc
caatcacacggcttccaggtccaagggaatatgacctcctcccagcagccccagcagcag
ttctatgggcaaaggaggatggccatggtggataccaacatgcccctgtctgagtcaggc
caggctcccctaacgctctacaagatgagccctggttctggatcacagcaacagcagtac
ccaacctcaccccgtatgaacaacaaaaacaacatgccagtgcagtggaatgaggtcagc
tcagggactgtggacgccacaggcacctcaagactcaccaagcagaacctcctcagaaac
aacaacctggcagtggttcagcagagacagaactgtgggcctttccagggtagtatgggt
agtaacagtaaccagcaggtgatgcctatgagccagaacatggagctacaaggctacact
caaagaagcaacgcccaaaggatcaactctgtccaacagcaacagaggcagccatgcagc
atgaattatactgagcagatgagtccccagcagggatacggccaagacattgtccccatc
cctaactctggatctgggaatggcagcctacgacccaactacaacggcatggcactgccc
aatggcagagtaatggcaacacataatccagatattcaaaactacagatcaaggactcag
gttgaaagctatccccttcacatgaatcaggttgagcagctgaactacagtagtacgcct
cagcagcaagccgtccatactggaaccagagatgggatgcagcccaggcttcccatggag
accaagtctatgtccagacaacatgtaagatccagcagtacgatgcagaaccgtttcctt
cagtctgacttcaatcacaacacctctgaggccagtccaaagaagccaggccgcaccgca
gcacataacgtgggacaaaagggaaactccaactctaacgctccaatgttatacactggc
cagatacacatgttcgagtccaacaacaacctgagtttcgactcccccatgtccccctgc
acaccccaggcactggtaggcactgccgttaccatggtatccccaggggtcaaccaggtc
accagcaccgtggactcctctggtgtggagcacgcccagattgactttgatgccatgttg
gatgatggtgaccactccagcctgatgtcggggaccctcagccccgggctcctcacaagt
ctgtcccagaactcctccaggctcaccaccccccgtagctctgtgaccctggcctctgtg
ccagcagggatcggtaacatggccatcggcgatatgaactccatgttgaccgccctggct
gaggagagtaagttcctcaacatgatgagctaa
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integrated database retrieval system