Oncorhynchus mykiss (rainbow trout): 110502234
Help
Entry
110502234 CDS
T07259
Name
(RefSeq) stromal cell-derived factor 1 isoform X2
KO
K10031
C-X-C motif chemokine 12
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060
Cytokine-cytokine receptor interaction
omy04672
Intestinal immune network for IgA production
omy04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110502234
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110502234
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
110502234
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
110502234
00536 Glycosaminoglycan binding proteins [BR:
omy00536
]
110502234
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Chemokines
110502234
Glycosaminoglycan binding proteins [BR:
omy00536
]
Heparan sulfate / Heparin
Chemokines
110502234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
110502234
NCBI-ProteinID:
XP_021435783
LinkDB
All DBs
Position
23:complement(11907827..11953940)
Genome browser
AA seq
98 aa
AA seq
DB search
MDLKYLAVMAVLAVATYAPFSQAKPISLVERCWCRSTVNTVPQRNIRELKFLHTPNCPFQ
VIAKLKNHKEVCINPETKWLQQYLKNALNKMKTSKQTN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaatacttggcggttatggctgtgctcgctgtggcgacatacgctcctttc
tcacaagctaaaccaatcagtctggtggagaggtgttggtgtcgttctacagttaacacc
gtcccccagcgcaacatccgagaactgaagttcctgcacacacccaactgccccttccaa
gtgattgccaagctgaagaaccacaaggaggtttgtatcaatcccgagaccaagtggctg
cagcagtacctgaagaatgccctcaacaagatgaagacatccaagcagaccaactag
DBGET
integrated database retrieval system
