Oncorhynchus mykiss (rainbow trout): 110502251
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Entry
110502251 CDS
T07259
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110502251
Membrane trafficking [BR:
omy04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
110502251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
110502251
NCBI-ProteinID:
XP_021435819
Ensembl:
ENSOMYG00000042297
LinkDB
All DBs
Position
23:10923559..10930057
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AA seq
952 aa
AA seq
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MMQRMLEQVTDFVDFTRGTDLNEYLRQTYSNNRSCKNNLSDVRVSPDGRHIHVILRKPKV
GLMTFDKYQRPQQIQSQKHLDLGMTRAVPIVDIVYFDDKNRDGGVALLAVIFENGKAEFW
KFLELKGGWHPLHTADLCNSPRAKVISVSASQNYIVWCEERPPSESSLLVNETHKFRYCI
CKRTYEVEEMAVSLGGMKIALHNNPRYNVISSGENVYLLPDLKDKSTMSLSKFFLMWSPR
YDTFRVSSTCKGNLLRKDSPSTKESDFRRLITDCTGYLSALSPPDIYGYSPTGSGGLLLL
LSTGWVSLLQKDGVLRQIYKLADNCLASSSAHNSLNVYQDTLALTIGRTLYLIDTTCGVE
LEKIALKREGLLYVNRTERQAPHLLLETGLFVVTLRDGDPWGHDSDPKQKTPSLGTGESI
SPAALLVEAVFEEACKYYQQRSLSSTRLTVEKLKRGGMFQAPITLANIVGDYLQSRGERG
VELPQGGGRRGQEKLLGSLEAELKGLVSLEEVKGGLVKEREVEDVCESLVQQEVGRLLLS
SELDRDSLLYLNSIFSLFPGQAWRATQSALQLRCNGEGSLSSKVPPEVWKTVLSPVQAPT
VTANLPYTNGNSQSKHKPPKPCPSTGSSFKLSPSLSSNSSPPAANSALPVFELLCHSVFC
FQPSWLPRFLELAQQQQTSAGLGMGLGLGGSTWSYSGGRGFAENGESLPLYKRALSALPL
PDPGSDLKQYPDYEQNQDLEVDLLLVSGRPNAVLQALRILMGRRQWERVTQVAQRFCRQS
PLLNKEIFTTLLCEVAQHRDLDPYLDLLWALCPEDLTVTAILNIVLKNIPSSSSLSTSFS
PSSNIPPSSPFADPQSSQLTFGLLKPLLSKVLQRETRPNQRYADILQSPSFPPPTPPRQA
KGLPRSTTEPSIGLDLQHNDIISNMAAILDQHDPSKHRTVHGGRVTSTPNPD
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacgaatgttggaacaagtgacagatttcgtggactttactagaggtacagat
ttaaacgagtatctaagacagacgtattcgaataacagaagttgcaaaaacaatctatca
gatgtgcgcgtgagcccagatggacgccacattcacgtcattctccgcaaacccaaggtt
ggtctcatgacttttgacaaatatcagagaccgcagcagatccagagccaaaagcaccta
gatttggggatgactcgggctgtgcccattgtggatattgtatattttgacgacaaaaac
agagacggcggtgttgcgctgttagctgtcatattcgagaatggaaaagcagagttttgg
aaatttctggaactcaaaggggggtggcatcccctgcacaccgcggacctttgcaacagc
ccccgggctaaagtaatctctgtgtcggccagtcagaactacatcgtctggtgtgaggag
cggccaccgtcagagagttcattacttgtcaatgagacccacaagttcaggtactgcatc
tgcaaacgaacctatgaggtggaggaaatggctgtcagtttagggggcatgaaaattgct
ctgcacaacaacccccgctacaacgtcatcagctcaggtgagaatgtttacctactacct
gatttgaaagacaaatccaccatgtccctctccaaattctttctcatgtggtccccccgg
tatgacacattcagagtgagcagcacctgtaaaggtaatctcctccgaaaagactcacct
tctactaaagaatctgactttagaaggttgataacagactgcacgggatacctatcagcc
cttagcccccctgatatatatggctactcccccactggcagtggaggcctgttactgctg
ctcagcacaggttgggtcagtctactacagaaggatggggtgttacgacagatctacaaa
ctagctgacaactgcctagccagcagcagtgcccataacagcctgaacgtgtaccaggac
accctggctctgaccatcggacggaccctctacctgattgacactacgtgtggtgtggag
ctggagaaaatagccctgaagagagaggggctactctacgtgaacaggaccgagaggcag
gcaccacacctgctgttagaaaccggcctatttgtagtgacgctccgggacggcgacccc
tggggccacgactctgacccaaagcagaagaccccgtccctgggtactggagagagcatc
agccctgcagctctactggtagaggctgtgttcgaggaagcctgtaagtattaccaacag
agaagtctcagcagcactcggctcactgtggagaagttaaagagaggagggatgttccag
gctcctatcactctggcaaacatcgtcggagactacctccagagcaggggggagagggga
gtggagttaccccagggaggaggcaggagaggacaggagaagctgctcgggtccctggag
gctgaactgaaggggctggtctccctagaggaggtgaaggggggattggtgaaggagagg
gaggtggaggatgtgtgtgagagtctagtgcagcaggaggtggggagactcctcttgtcg
tcagagctcgaccgagactctctactctacctcaactccatcttcagcctgttccccggt
caggcctggagggccacacagagcgctctgcagctacgctgcaacggagagggctcgctc
tcctctaaagtgcccccggaggtctggaagactgtcctcagccctgtacaggcccccact
gtcaccgcaaatctgccctacaccaatggcaacagccagtctaaacacaagccacccaaa
ccttgccccagcactggctctagttttaaacttagccccagccttagctccaactccagc
ccacctgccgctaactcggccctgcctgtcttcgagctcctgtgccactccgtcttctgc
ttccagcccagctggctgcccaggttcctggagctggcccagcagcagcagacctctgca
ggcttggggatgggtctaggccttggtggctccacctggagctactctggaggtagggga
tttgcagagaatggagagagcctccccctgtataaacgcgccctttcagctctgcctcta
cctgaccccggatcagacctgaaacaatacccagattatgaacaaaaccaggacttggag
gtggatctccttttggtgagtggtaggccaaacgctgtcctccaggctctgaggatcttg
atggggagacgacagtgggagagggtaacccaagtggcacagcggttctgcaggcagagt
cccttactgaacaaagagatatttactaccttactgtgtgaggtggcccagcatcgagac
ctggatccatacctagacctcctctgggctctgtgtcctgaagatcttacggtcacggcc
atacttaacattgtgctgaaaaatataccctcatcatcttccttatctacatccttctcc
ccctcctcaaatatccccccctcctctccctttgctgacccccagtccagccagttgacc
tttgggttgttgaagccgttgctcagtaaggttctacagagagagaccaggcccaaccag
cgatatgctgacatcctccagtcgccctcgttcccccctcccacgccccctcgtcaggct
aaaggactgcctaggtccaccaccgagcctagcataggcttagatctgcagcacaatgat
atcatcagcaacatggcggccatcttggatcaacacgacccatctaaacacaggactgtc
cacgggggcagggtgacctccactccgaaccccgactga
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