Oncorhynchus mykiss (rainbow trout): 110503633
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Entry
110503633 CDS
T07259
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04270
Vascular smooth muscle contraction
omy04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110503633
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
110503633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110503633
Membrane trafficking [BR:
omy04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110503633
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDV_N
PGDH_C
Motif
Other DBs
NCBI-GeneID:
110503633
NCBI-ProteinID:
XP_036825414
UniProt:
A0A8C7NEK8
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All DBs
Position
3:13180976..13241773
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AA seq
1049 aa
AA seq
DB search
MSIIGAEDEDFENDLDPTVDDHSSHFTSIELVKSRPTHLLVFLQHVILQFDCSSLLCYLH
ADLFKNLSTKETKKQFVEFYNSFLDKSAILRVQIPHNVSFELDRTRPDLLSEEQQKKFVQ
DVQLAQAPEVLRQLEDFRQKRMMGMTPNAAELLEVESHYPTDRIPMEMKEKAVAETLLDK
MSEIHPSIVADEEKCSSIFAAVAFYMKHLGVKSRVADSKKSRGFFRRPLGKNKKSEESTK
SKQKGGFPNILSAAGGWIAGSTEVKLPKVEAEVDKEKVNQERKVSSGLAPSRGSSAPDAA
PPALSRKSVSTGSSPHQGLEVSEGSGVHISVTSSPDFSHSEIGLFSSRSDPQLVAEGGEV
SPAGMAGGLAIWEPPSPNEPPLEENLDKDRRKTRRVGRSESARVDRHSSRRRGSSRAKQS
RSRSDVDLQAAATAAHSSPTSPHPSVDEGVLLPEGVLPGLSLSGTTPQQEEQDPRLLELE
QDPPNWREHTPPDTLKDLSKKETKRQEVINELFATEHAHVRMLSVLQTVFWKPLEREELM
TATELATIFPSLDEIIDMHYAFYEHLKKLRQHNFIVKAIGTTLLNRFGGTEGEWFQKLTS
RFCSHQTWALEQLKMRQKKDPRFNSFILEAESRPQCRRLQLKDIIPTEMQRLTKYPLLLE
NIAKCTEDTLEKESIQQSAECCRKILNHVNEEVKQMENLLTLKDYQRRLDTSGLKPSNEL
YLEYKYLDLAQRRMIYEGPLTWRVTKEKTLEVQCVLLGDLLVLLQKQDDKMVLKCQSKSN
IAVQEGKQMLSPIIKLDSAFLREVATDRKAFYVIFTWDSGAQIYELVAQSVGERRNWTDV
IKMAVDELKKTGPPSDLKRGNSILPGGGGNPYSPTTFPQPPLSPTENGGVLLKNSIERDK
DILTDEMKSVDSHHSLIDYLSDKGFDLIGHSNSDQVKVANSALNEVMSLKRLLVGSISLS
DNSQPDEENGREEPERQDQGLQGEEGGGMKIEEEGGISAPLVLSQERMEEVCRKLQSLEV
QLKRLQSVEEEHHRLQKALSKFSLEGGNF
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcatcggcgccgaggatgaggactttgagaatgatctggaccccacggtggat
gaccacagcagtcacttcaccagtatagagctagtgaagagtcggccaacccacctgctg
gtcttccttcagcacgtcatcctgcagttcgactgctcctccctgttgtgttacctccat
gctgacctcttcaagaacctcagtaccaaagagaccaagaagcagtttgtggagttctac
aacagcttcctggacaagagcgctattctcagagtgcaaatccctcacaatgtatcgttt
gagttggaccgtaccagaccagacctgctcagtgaggagcagcagaagaagtttgtccag
gatgtccagttggctcaggccccagaggtgctgcgacagctggaagactttaggcagaag
aggatgatgggtatgacccctaacgcggcagagctgctggaggtggagtctcactacccc
actgatcgtatccccatggagatgaaggagaaggccgtggcagagaccctgctggacaaa
atgtctgagatccacccctccatcgtcgcagacgaggagaaatgttcgtcaatctttgca
gcagtggccttctacatgaagcacctaggagtgaagtccagggtagctgacagtaagaag
tccagagggttcttcaggagaccccttgggaagaataagaagagtgaggagtccactaaa
tctaaacagaaggggggttttcccaacatcctcagcgccgccggtggctggattgctggc
agcactgaggtcaaacttcctaaagtggaggctgaagtggataaagagaaggtgaatcag
gagcgtaaggtttccagcggcctcgccccctctcgaggctcctccgcccctgatgccgcc
cctccagcattaagcaggaagtctgtttccacaggatcctccccccatcagggtttggag
gtcagcgagggctcaggggttcacatcagtgtgacctccagcccagacttctcccacagc
gagataggtctgttcagcagtcgttcggacccccagttggtggcggaggggggcgaggtg
tcccccgcggggatggcaggggggctggctatatgggagcccccctcacccaatgaaccc
cccctggaggaaaacctggacaaagacagacgcaagacaaggcgtgtgggacgcagtgag
agtgctcgtgtggacagacattcctcccgtcgccgtggctcctcccgggccaaacagtcg
cgttcccgtagcgacgtggacctgcaagccgccgccacggcagcacactcctccccgacc
tctccccacccctctgttgatgaaggggtgttactgcccgagggtgtgctcccaggtctt
tccctctctggcaccaccccccagcaggaggaacaggaccctcgcctcctggagctggag
caggacccgcccaactggagagaacacacccccccagacaccctcaaagacctcagcaag
aaggagaccaagcggcaggaggtcatcaacgagttgtttgcgacggagcacgcccacgtg
cgtatgctgagtgttctgcagacagtgttctggaagcctttggagagagaggaactcatg
accgccacagagctggccaccatcttccccagcctggacgagatcatagacatgcactat
gctttctacgagcacctgaagaagctgcgtcagcacaatttcatcgtcaaggccatcgga
accacgttactcaataggtttggagggacggagggtgagtggtttcagaagttaacgtct
aggttctgtagtcaccagacgtgggccctggaacagctgaagatgagacagaagaaagac
cctcgtttcaactccttcatactggaggcagagagtaggcctcagtgtcgtaggctgcag
ctgaaggacatcatccccactgagatgcagaggctcaccaaataccccctactgctggaa
aacattgccaagtgcacagaggacaccttggagaaggagagtattcagcagagtgcagag
tgctgtaggaagatcctcaaccacgtcaacgaggaggtcaaacagatggagaacctgctg
accctgaaagactaccagcgcaggctggacacctcaggactcaaacccagtaacgagctg
tacctggagtacaagtaccttgacttggcccagagaaggatgatctatgaggggcctctg
acctggagagtgaccaaggagaaaaccttagaagtgcagtgtgtgttgctgggggatctg
ttggtgctgttacagaagcaggatgataagatggtgctgaagtgtcagagtaagagtaac
atcgctgttcaggagggcaagcagatgctcagccctatcatcaaactagactctgccttc
ctccgagaggtggccacagaccgtaaggctttctacgtgatcttcacctgggacagcggg
gctcagatctacgaactagtggctcaatctgtcggggagaggaggaactggacagatgtg
atcaagatggcagtagatgagctgaagaagacaggacctccatctgacctgaagagagga
aacagcatcttacctggaggaggaggaaacccatacagccccaccacgtttcctcaacca
cctctcagccccactgaaaatggaggagtcttgttgaaaaacagcattgaacgagataag
gacatcctgacggatgagatgaagtctgtggactctcatcattctctgattgattacctc
tcggacaaaggcttcgacttgattggccacagcaacagtgatcaggtgaaagtggccaat
agcgcgttaaacgaagtcatgtccctcaagaggctattggttggcagcatcagcctatca
gacaactcacagcctgatgaggagaatggaagggaggagccagagaggcaggaccaagga
ctacaaggggaggagggtggagggatgaagatagaggaggagggagggatcagtgctcct
ctggttctgtcccaggagaggatggaggaggtgtgccggaaactgcagagtctggaggta
cagctgaagagactgcagagtgttgaggaggagcaccaccggctgcagaaggccctgtct
aagttctccctggaggggggaaacttctag
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integrated database retrieval system
