Oncorhynchus mykiss (rainbow trout): 110504588
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Entry
110504588 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
omy04210
Apoptosis
omy04217
Necroptosis
omy04510
Focal adhesion
omy04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110504588
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110504588
04217 Necroptosis
110504588
09144 Cellular community - eukaryotes
04510 Focal adhesion
110504588
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110504588
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110504588
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110504588
03029 Mitochondrial biogenesis [BR:
omy03029
]
110504588
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110504588
Peptidases and inhibitors [BR:
omy01002
]
Peptidase inhibitors
Family I32: IAP family
110504588
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110504588
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
110504588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
110504588
NCBI-ProteinID:
XP_021439027
Ensembl:
ENSOMYG00000043447
LinkDB
All DBs
Position
31:complement(12546009..12555827)
Genome browser
AA seq
467 aa
AA seq
DB search
MSGPGRDSDLESDHAVDWSMMDMRLDSFRGSPLAQQVSAERLARAGFYFTGQADQVRCFS
CHKTVENWCGGDTPAERHAEVSPNCKFLSCTHRSRVNSLQGAMLTNEPHYNEDAEDMEFR
LRTGEVVDESTYPMVPHMVSEDSRFNTLGPWPSTSPVRPRELAQAGLFYLGESDRVQCFC
CGGMLGGWEAGDTAWGEHSKHFPYCFFILGHDVGNLPSQVGREEEVGETRPRPGPRVPMQ
SFEERLGSFAGIQHPIDHERLARAGFYNTGAPDRVVCFCCGGGLKGWQPDENPWEEHAKH
YPGCNFLLTEKGQEFVSSVQLQGPGRNNAASSHLNGCSSHGTEVLRSAMAQRAVEMGLEP
ALVERTILERIRRAGTGYSTLETLLQDCFNRGPDSDAETAENHDEDPFEKLRKLQREKQC
KVCMDRDICIVFIPCGHLVVCKECSEALDKCPICCAAITQKIKTYIS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccccgggagagacagtgatctggagtcggaccatgcagtagactggtccatg
atggacatgcggctggactcgttccggggttcccccctggcccagcaggtgtcagcggaa
aggctggcccgtgctgggttttacttcacaggacaggctgaccaggtgcgctgcttcagc
tgccacaaaactgtagagaactggtgtggaggggacacacccgcggagaggcacgcggag
gtctcccctaactgtaagttcctgagctgcacccatcgttccagggtcaactctcttcaa
ggtgccatgctgaccaacgaaccccactacaatgaagacgccgaggacatggagttccgc
ctgagaacgggagaggtggtggatgagtccacctaccccatggtcccgcacatggtcagc
gaagactcccggttcaacaccttaggcccgtggccctccacatccccggtccggcctaga
gagctggcccaggcagggctcttctatctgggggagagtgaccgggtgcagtgcttctgc
tgtggagggatgctggggggctgggaggctggggacacggcgtggggggagcactccaaa
cacttcccctactgcttcttcatactggggcatgatgtggggaacctcccctctcaggtg
gggagagaggaggaggtaggggagaccaggccacgcccgggtcctcgggtccccatgcag
agctttgaggagaggctaggcagctttgcaggaatccagcaccctattgaccacgagagg
ctggccagagcaggcttctacaacacaggagctccagaccgtgtggtgtgtttctgctgt
ggtggaggtctgaagggctggcagccggacgagaatccctgggaggagcacgccaaacac
tatccggggtgtaattttctgctgacagagaaaggacaggagttcgtcagcagtgttcag
ttacaaggtcctggcaggaacaatgccgcttcaagtcacctgaatggatgttcaagtcac
ggaacagaggtgctgaggtcagccatggcccagagggcggtagagatgggtctggagcct
gccctggtagagaggaccatactggagaggatacgcagagctgggacaggctactccacc
ctggagactctgctgcaggactgctttaacagaggccctgacagcgacgcagagaccgca
gagaaccatgatgaggatccctttgagaagctacggaagctgcagagggagaaacagtgc
aaagtgtgtatggacagagacatctgcatcgtcttcatcccctgtgggcacctggtcgtc
tgcaaggagtgttccgaggccctcgacaagtgtcccatctgctgtgcagccatcacacaa
aagatcaagacatacatctcctaa
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