KEGG   Oncorhynchus mykiss (rainbow trout): 110504760
Entry
110504760         CDS       T07259                                 
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:omy03036]
    110504760
Enzymes [BR:omy01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     110504760
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     110504760
   Histone demethylases
    110504760
SSDB
Motif
Pfam: KDM6_C-hel JmjC KDM6_GATAL TPR_1 TPR_17 TPR_8 TPR_2 TPR_12 TPR_16 TPR_11 TPR_CcmH_CycH TPR_7 TPR_9 TPR_19 RPN7 ARM_TT21_C ANAPC3
Other DBs
NCBI-GeneID: 110504760
NCBI-ProteinID: XP_036831075
LinkDB
Position
3:74683002..74778935
AA seq 1527 aa
MKSCGVSLDAAAARSLGAAGDEEKKMAAGKANEIELDFLKLTAQERDSLVEMNSSLFGFQ
RLHEDGARTKALLLKAVSCYDSAILKSEGKVEPEMFCQLGHFNLLLEDYPKALSAYQRYY
SLQSDYWKNAGFLYGLGLVYFHYNTFHWSVQPSSSEAQAGQRRAIKAFQDGLYIDPSFSR
ATEIHMRLGLMFKGNTNYESSLKHFQLALIDSNPCTLSKAEIQFHIAHLYEIQKKFRAAK
EAYENLLQTENLPAQVKAATLQQLGWMHHTVELLGDPGSKDSYAIQCLQKSLEADPNSGQ
SWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAV
QLDHSHAAAWMDLGTLYESCGQPHDAIKCYINATRSKACTNTAALTHRIKLLQTGSVAGG
KGGKMLPSIEEAWSLPIPAELTSRQGGLNTAAGSPGPQAQQQACKPHQGGEGGQVQTQVS
PHPSHTDSQASPAKRKRTTSPAKSGVDLWTNDPVQQQIPSWYLTPQRLQLLDQLRTNRTS
LKPPQVQMLDQLENQFSLMQQHQQQVKQQAAGQLWPTLPNGPSLSPNSLPSPHPLSRTSP
VSHITAHPPCTPQPMANGHLSLSHLGQLGNQEAGTMGNNHTPGLPGAGTLPGGLTGSGRS
NRNVPYLQQNCLPHNCTAASDTSTPTSNNTSSTNTPTSNTTSHRSNSTSNAEEAWKSQQQ
TNSPEGLHKGPGSYSAGPNGEHPSSPSHPTQAAGPGAQSLNQVGHSTGPCPASSSSSCSS
LSSFSSSPQRGGAPNYLPSSPLPSTTTTSEAQTKETTPLGISSGLATPAGTLLSPSPSLT
ALTHGLANHIQQGAVTTTYSSGSQSQPGSPPPGAFSSDDPQLSALLRGKDNNKDDDNHDS
NNNHHRGVNQGATTDDNIKVNNIHPGVHHGGPKPLSEHSVASSALSAMSVTTPSPHRSTN
PPTATNLASLNSSTSHSGTTGTTTTPQVNGKGLEDSRSPVKVDPTELSHRRPALASWSSV
SIYPSSNQVLKACRNLGKNGLSSSSILLDQCPPPRPPLPPSPSLPKDKLNPSTPSIYLEN
KRDAFFPPLHQFCTNPCNPVTVIRGLAGALKLDLGLFSTKTLVEANPDHLVEVRTQLSQP
TDENWDLSGTRKMWRCQSSQSHTTIAKYAQYQASSFQDSLREEKKMELEAEAASAESVAC
RKKGPFKHIKFGTNIDLSDDRKWKLHLQELSKLPAFARVVSAGNLLSHVGHTILGMNTVQ
LYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFSVPQPYWGIINDFCEKNNINFLMGSW
WPNLEDLYEADVPVYRFIQRPGDLVWLNTGTVHWVQAIGWCNNIAWNVGPLTAYQYKLAA
ERYEWNKLQSVKSIVPMIHLSWNMARNIKVSDSKLFQMIKYCLLRTLKQCQMLRELLQAS
GKELVWHGRTRDEPAHYCSICEVEVFALLFVTSESNSRKTYVVHCQDCARRGSSNLDNFV
VLEQYKMDDLTQVYDQFTLAPSLPSSS
NT seq 4584 nt   +upstreamnt  +downstreamnt
atgaaatcgtgcggagtgtcgctcgacgcggctgctgctcgaagtctcggcgctgctggt
gatgaggaaaagaaaatggcggcgggaaaagcgaatgaaatcgaattggactttctgaag
ctaacagcgcaggagagagacagcttggtcgaaatgaacagttcactatttggatttcag
aggcttcatgaagatggcgccagaacgaaggccttgctgttaaaggctgtaagctgctat
gactctgccatcctgaagtcagaagggaaagtagagccagagatgttctgccagctgggc
cacttcaatcttctcctggaggactatccaaaagcattatctgcatatcagaggtactac
agtttacagtcggactactggaagaatgcgggctttttatatggccttggtttggtctac
ttccattacaacacatttcactggtcagtgcagccctcctcctcagaggcccaggcagga
cagagaagggcgataaaagcatttcaggatgggctctatattgaccccagtttctcccga
gccacagagatccacatgagactgggcctcatgtttaaaggcaacaccaattacgagtcc
agtctgaagcattttcagctggctttgattgactccaacccctgcactttgtccaaagct
gaaattcagttccacatcgctcatttatatgagattcagaagaaattcagagcagcaaaa
gaagcgtatgagaatttactccagacagagaatcttcctgcacaggtgaaggctgctaca
ctgcagcaactaggctggatgcatcacacagtggagctgttaggggacccaggctccaag
gacagctatgccatccagtgtctgcagaagtcactagaagcagaccccaactctggacag
tcctggtacttcctcggcaggtgctactccagtattgggaaagtccaggatgccttcatc
tcctacagacagtccattgacaagtctgaggccagcgctgacacctggtgctccataggt
gttctgtaccagcagcagaaccagcctatggatgctctgcaggcgtacatctgtgcagtg
cagctggaccacagtcatgcggctgcctggatggacctgggcacgctctacgagtcctgc
gggcagccgcacgacgcaatcaagtgttacatcaacgccacgcgcagcaaggcctgcacc
aacaccgctgccctcacacaccgcattaagctgctccagacaggtagtgttgcggggggg
aagggtggtaaaatgcttcctagtattgaggaggcgtggagcctgcccatccccgctgag
ctcacctccagacaggggggcctgaacactgcagcaggcagcccagggccacaggcacag
cagcaggcatgtaagccccaccagggaggtgagggaggccaggtacagacacaggtctct
ccccatcccagccacactgacagtcaggccagccctgccaagaggaaacgcaccaccagc
ccagctaagagtggtgtcgacttgtggacaaacgacccggtacaacagcagatccccagc
tggtacctaacgccacagagactacagctcctggatcagctccggaccaaccggaccagt
ctcaaaccaccacaggtacagatgctggatcagctggaaaaccagttctccctcatgcag
cagcatcaacagcaggtgaaacagcaggcagcaggccagttgtggcccacactacccaac
ggcccctcgctatccccaaactccctcccctcacctcaccccctctctcggacttcacct
gtcagtcacatcacagcccaccctccctgcactcctcagccaatggccaacggacattta
tctttaagtcacctgggacagctaggtaatcaggaggcggggaccatgggcaataatcac
actcccggtttaccgggtgcagggactttaccggggggtctaacgggaagtggcaggagt
aacagaaacgtgccttacctgcagcagaactgtctacctcacaactgcacagccgctagt
gataccagtacccctaccagcaacaacactagtagtaccaatacccccaccagcaacacc
accagtcaccgcagtaacagtaccagtaatgcagaggaggcctggaagagccagcaacag
accaactcccctgaggggcttcacaaaggtccaggttcatattcggcaggtcccaatgga
gaacacccttcctccccctcccatcccacccaggcagctggccctggtgctcaaagtcta
aatcaggttggacattccaccgggccctgccctgcctcctcttcctcctcctgttcctcc
ctctcctccttctcctcttcgccacagaggggcggtgcccccaactatctcccctcctct
cccctcccctccaccaccactacctcagaggcccaaaccaaagagaccacgcctttagga
atcagcagcggattggctacccctgcagggacactgctcagtcccagtcccagtctcacc
gcccttacacatggattggctaatcacatccagcagggggcggtgaccaccacgtacagc
tcggggagccaatcccagcccggctctcctcctccgggcgcgttcagttcagacgaccct
cagctctcagccttgctcagaggaaaggacaataataaggatgatgataaccacgatagt
aataataatcatcatcgtggtgttaatcaaggagccaccacggacgataacatcaaggtc
aacaacatccacccgggtgtccaccatggaggtcccaaacccctgtcggaacactctgtg
gcttcctcggccctctcagccatgtccgtcaccaccccctccccccaccgctccactaac
ccccccacagccaccaacctcgccagccttaacagcagcacgtcccacagcggaaccacc
ggtaccaccactaccccacaggtcaatggtaaggggctagaggactctcgcagcccagtc
aaggtggatcccactgagctgtctcacagaaggccagccctggcctcatggtcctcagta
tccatctacccaagttcaaaccaggtgctcaaagcatgcaggaacctggggaagaatggc
ctgtccagcagcagtatcctccttgatcagtgtcctccgcccaggccccccctgcccccc
tcaccctcgctgccgaaggacaaactcaacccctccacacccagtatctacctggagaat
aagagagatgccttcttccctccgcttcatcagttctgcaccaacccctgcaaccctgtc
actgtcatcagagggctggccggggcgctcaaactggacctgggtctgttctctactaag
accctggtggaggctaacccagaccacctggtggaggtgcggactcagctgtctcagccc
accgatgagaactgggacctgagcggcaccaggaagatgtggcgctgccagagcagccag
tcacacaccaccatcgccaagtacgcccaataccaggcgtcgtccttccaggattcacta
cgggaggagaagaagatggagctggaagcagaggcagccagcgcagagagtgtggcgtgc
cggaagaaagggcccttcaaacacatcaagtttggcaccaacatcgacctgtctgacgat
aggaagtggaaactgcatctgcaggagctcagtaagctgccagcctttgccagggtggtg
tctgctggaaacctgctcagccacgtaggacacaccatcctgggcatgaacactgtccag
ctttacatgaaggtccctgggagcaggacgccaggtcaccaagagaacaacaacttctgt
tcagtgaacatcaacatcggcccgggggactgtgagtggttctctgtgccccagccttac
tggggaatcattaacgacttctgtgaaaagaacaacatcaacttcctgatgggttcatgg
tggcccaacctggaggacctgtacgaggcagatgtgcctgtctaccgcttcatccagcgc
cccggagacctggtgtggctcaacacgggcaccgtccactgggtccaggccatcggctgg
tgcaacaacatcgcctggaacgtaggacccctcactgcgtaccagtataagctggcagca
gagcgatatgaatggaataagctgcagagcgtcaagtccattgtccccatgatacacctc
tcctggaacatggccaggaatatcaaagtctccgacagcaagctcttccagatgatcaag
tactgtctgctgcggacattgaagcagtgtcagatgctgcgagagctactgcaggcgtca
ggcaaggagctggtgtggcacggcaggaccagggacgaacccgcacattactgcagcatc
tgtgaggtggaggtgtttgccctactgtttgtaaccagtgagagtaacagcaggaagaca
tacgtggtgcactgtcaggactgtgcccgtagggggagctctaacctggacaactttgtg
gtgctggagcagtacaagatggacgacctcacacaggtctacgaccagttcacactcgct
ccttctttgccatcatcctcttga

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