Oncorhynchus mykiss (rainbow trout): 110504831
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Entry
110504831 CDS
T07259
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04020
Calcium signaling pathway
omy04510
Focal adhesion
omy04540
Gap junction
omy04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110504831
04020 Calcium signaling pathway
110504831
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110504831
04540 Gap junction
110504831
09142 Cell motility
04810 Regulation of actin cytoskeleton
110504831
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
omy01001
]
110504831
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
omy04090
]
110504831
Enzymes [BR:
omy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
110504831
Protein kinases [BR:
omy01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
110504831
CD molecules [BR:
omy04090
]
Proteins
110504831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
Psg1
VEGFR-1-like_Ig-like
Haspin_kinase
DUF4715
Motif
Other DBs
NCBI-GeneID:
110504831
NCBI-ProteinID:
XP_021439342
Ensembl:
ENSOMYG00000026317
UniProt:
A0A8C7RQM8
LinkDB
All DBs
Position
31:complement(25244860..25283206)
Genome browser
AA seq
1094 aa
AA seq
DB search
MRSVRVSTLHLTALLTALLHFCPEYRCVEISPSNSEVVMTPGDSMIFTCSSWGTVGWRFK
RNDDIPYFGVENQNTTSVLILDNVTWRHTGVYVCAEALTDEAREVAVFVPDPEVWFIESS
HGMVTKTSEEGTIPCVVTNPHINVTLYETDSDMHLKGVYIPSEGYRASLEDRTYVCRGEL
NGEEKESQEFYVLSIVVPETIDAYINASKTVLKQGEPLTVNCTVHGVELVFFSWDYPNRD
VDFIEPLTDILSSQSMRSCLAVSKATLANTGQYVCHVHESVQDQRATANVNITVLERGFV
ELRSVQERNVSAQLHQNVELRVEIESYPAPRVRWTKDNATVNGDNTVITRQEHETRYVSI
LTLVRIRTEQKGLYTVLVANGDDTKEVTFDLEVKVPPQITDLSDHHLPGKRHAVTCVAEG
VPSPSIQFFSCDSMLKCSNRSTVWQPLVSDPETLSIQTNISFNESRKVGQVRSQVTFHKP
QQVTVRCEASNEGGVRRRDVKLVSSTLFSQVAVLAAVLPLVVILITSIIILIAVWRKKPR
YEIRWKVIESVSLDGHEYIYVDPIHLPYDLAWEMARDSLVLGRTLGSGAFGRVVEATAYG
LSHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVT
EYCRYGDLVDYLHRNKHTFLQYYAEKNQEDSGCRVSGGSTPLSQRKGYVSFGSEFDGGYM
DMSKDEPTVYVPMQELKDTIKYTDIQPSPYESPYQHHLYQEQDQTTVDSALVISDCPTLS
YSDLIGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDSNYVS
KGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGAPYPDLPMNELFYGALKR
GYRMAKPNHATDEVYEVMQKCWDEKYERRPEFSFLVHTMGNMLTDSYKKRYCQVNDEFFK
RDHPAVVRTKPRLSSHFPTPALTPSTAPATPQDTNPYPLTGDFRPEADGEEASYNDYIIP
IPDPKPEEEVCSEANDMPTKSLASSRALEDEEADSISQETVEADTIPEDKYLHANQALIP
LESSGTPEAEDSFL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtgtcagagtgtccactctccatctgacagccctactaacagctcttttgcac
ttctgccctgagtaccgttgcgtggagatctcccctagcaacagcgaggtcgtcatgaca
ccgggcgactccatgatcttcacctgttctagctgggggacagtcggatggaggttcaag
cggaatgacgacattccctattttggagtggagaaccagaacacaaccagtgttctcatt
ctggacaacgtgacgtggagacacacaggagtgtacgtctgtgccgaggctttgacggac
gaggctagagaggtggcagtctttgtgccggaccctgaagtgtggttcattgagagctcc
cacggcatggtgaccaagaccagcgaggaggggaccatcccctgtgtggtcaccaacccc
cacatcaacgtcaccctctacgagacggacagtgacatgcacctaaagggggtctacatc
cccagtgagggctacagggcatccctggaggacaggacctatgtgtgtcgtggggagctg
aacggagaggagaaagagtcccaggaattctacgtcttaagtatagttgtcccggagaca
atcgacgcctacatcaatgcgtctaagacggtgctgaagcagggcgagcctctgacagtg
aactgcacggtgcacggagtggagctggtcttcttctcctgggactaccccaacagagac
gtggacttcatcgagccattgacagacatcctgtcgtcccagagcatgcgctcctgcctc
gccgtctctaaggcgacgctggccaacacagggcagtacgtgtgtcacgttcacgagagt
gtccaggaccagagggccaccgccaacgtcaacatcaccgtcctcgagcgaggcttcgtg
gagctgaggtctgtccaggagcgtaacgtctcggcccagctgcaccagaacgtagagctg
agggttgagatcgagtcctaccccgctccacgtgtccgctggaccaaagacaacgccacc
gtcaacggagacaacaccgtcatcaccaggcaggagcacgagaccaggtacgtcagcata
ttgaccttggtgaggatcaggacggaacagaagggactttacactgttctcgtcgccaac
ggagacgacaccaaggaagtgacatttgatctggaggtcaaagttccccctcagataaca
gacctgtcggaccaccacctcccagggaagaggcatgcagtgacctgtgtggccgagggg
gtcccctccccctccatacagtttttcagctgtgacagcatgctcaagtgcagtaaccgg
agcacagtgtggcagcccctggtgtcagaccctgagaccctgagtatccagaccaacatt
agtttcaatgagagccgtaaggtgggccaggtccgcagccaggtcaccttccacaagccc
caacaggtgaccgtccgctgtgaggccagcaacgagggaggagtccgcaggagagacgtc
aaactggtgtccagcactctgttctcccaggtggcagtgttggctgcggttctacccctg
gtggtcatcctcatcacctccatcatcatcctcatcgctgtgtggaggaagaagcctcgc
tatgagattagatggaaggtgatagagtcagtgagtctggatggccatgagtacatctac
gtcgaccccatccacctgccctacgacctggcctgggagatggctcgagacagcctggtg
ctgggtcgtactcttgggtccggggcgtttggcagggtggtcgaggcgactgcctatggt
ctcagtcattcccagtccagcacaaaggtggcagtaaaaatgctcaaatccacagccagg
aggagtgagacccaggctctgatgtcagagctgaagatcatgagccacctggggcctcac
ctcaacatcgtcaacctgctgggagcttgcaccaaacagggtcctctctacctggtgacg
gagtactgtcgctatggagacctggtggactacttacacaggaacaagcacacgtttctg
cagtactacgctgagaagaaccaggaggactctggttgccgcgtctctggagggagcacc
cctctcagccagaggaaaggctacgtgtcgtttggcagtgagtttgatggtggctacatg
gacatgagtaaggacgagcccacggtgtacgtccccatgcaggaacttaaagacaccatc
aaatacactgacatccaaccttctccatatgagtcgccataccagcaccacctttaccag
gaacaagaccagaccacagtggacagtgccctggtcatcagtgactgccctaccctcagc
tattctgacctcattggcttcagctaccaggtggccaagggcatggagttccttgcctcc
aagaactgtgtccatcgtgatctggccgccaggaacgtgttgatctgtgaggggaagctg
gtgaagatctgtgactttggtctggccagagacatcatgcacgactccaactacgtctcc
aaaggcagcacgttccttcctcttaagtggatggccccagagagtattttccataacctg
tacaccaccctgagtgacgtgtggtcctatggcatcctgctctgggagatcttcaccctg
ggaggagccccctaccctgatctgcccatgaatgagctgttctacggtgccttaaagaga
ggatatcgcatggccaaacctaaccacgccaccgatgaagtttatgaagtcatgcagaag
tgctgggatgagaagtacgagagaaggccagagttctcttttctggtgcacacaatgggg
aacatgctcacagacagctataaaaagagatactgccaggtcaacgatgagttcttcaag
cgtgaccacccagccgtggtccgcaccaaacccaggctctcctctcacttccccactccg
gccctaaccccgtccaccgcccctgccaccccccaggacacaaacccctaccccctaact
ggggacttcagacccgaggcagatggtgaggaagcttcctacaacgactacatcatcccc
atcccagatcccaagcctgaggaggaagtctgctccgaggctaacgacatgccaacgaaa
agcctcgcaagttctcgggctctggaggacgaggaggctgattccatctcccaggagaca
gtggaggcagacaccattccagaggataaatatctccatgccaaccaggccctgattcca
ctggagtcctctggaacaccggaagcggaagacagcttcctgtaa
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integrated database retrieval system
