KEGG   Oncorhynchus mykiss (rainbow trout): 110505029
Entry
110505029         CDS       T07259                                 
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03008  Ribosome biogenesis in eukaryotes
omy03013  Nucleocytoplasmic transport
omy03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110505029
   03008 Ribosome biogenesis in eukaryotes
    110505029
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110505029
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110505029
   03009 Ribosome biogenesis [BR:omy03009]
    110505029
   03016 Transfer RNA biogenesis [BR:omy03016]
    110505029
   03036 Chromosome and associated proteins [BR:omy03036]
    110505029
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110505029
   04031 GTP-binding proteins [BR:omy04031]
    110505029
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     110505029
Ribosome biogenesis [BR:omy03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    110505029
  Pre-60S particles
    110505029
Transfer RNA biogenesis [BR:omy03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    110505029
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     110505029
   Spindle formation proteins
    110505029
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110505029
GTP-binding proteins [BR:omy04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    110505029
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RNA_helicase AAA_24 G-alpha Gtr1_RagA Pox_A32 ArgoMid AAA_7 Septin AAA_16 AAA_22 TsaE DUF5906 SRPRB AAA_33
Other DBs
NCBI-GeneID: 110505029
NCBI-ProteinID: XP_036825509
LinkDB
Position
31:complement(32917573..32921779)
AA seq 215 aa
MAEGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKY
NVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG
NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPA
LAPPEILMDPSLAAQYEHDLKVASETALPDEDDDL
NT seq 648 nt   +upstreamnt  +downstreamnt
atggcagagggagagccgcaggtccagttcaagcttgtgttggttggtgatggaggaacg
ggaaagaccactttcgtcaaaagacatttgacgggagagtttgagaagaaatatgttgcc
acgctgggagtggaggtgcacccgctggtattccacaccaacagaggggccatcaaatat
aatgtgtgggacacagccgggcaggagaagtttggagggctccgagatggctactacatc
caagcccagtgcgcaatcatcatgtttgacgtcacgtcccgagtcacctacaagaacgta
cccaactggcatcgtgatctggtgcgagtctgtgagaacattcccatagtcctctgcggc
aacaaggtagacatcaaagacaggaaagtcaaagccaagagcatcgtattccatcgcaag
aagaacctccagtactacgacatctctgccaagagtaattacaactttgagaagcccttc
ctgtggctagcacggaagctgattggagaccccaacctggagttcgtggccatgcccgct
ctcgccccaccagagatcctcatggacccctccctcgcagcgcagtacgagcatgacctc
aaagttgcatcagaaacagcgctcccagatgaagatgatgacctttaa

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