Oncorhynchus mykiss (rainbow trout): 110505508 Help Entry 110505508         CDS       T07259                                  Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy04115   p53 signaling pathway omy04145   Phagosome omy04148   Efferocytosis omy04350   TGF-beta signaling pathway omy04510   Focal adhesion omy04512   ECM-receptor interaction omy04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:omy00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     110505508   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110505508  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     110505508    04148 Efferocytosis     110505508   09143 Cell growth and death    04115 p53 signaling pathway     110505508   09144 Cellular community - eukaryotes    04510 Focal adhesion     110505508   09142 Cell motility    04820 Cytoskeleton in muscle cells     110505508  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:omy04131]     110505508   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:omy00536]     110505508 Membrane trafficking [BR:omy04131]  Endocytosis   Phagocytosis    Opsonins     110505508 Glycosaminoglycan binding proteins [BR:omy00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110505508 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS cEGF TSP1_CCN EGF Laminin_G_3 Laminin_G_2 Motif Other DBs NCBI-GeneID:  110505508 NCBI-ProteinID:  XP_021440442 Ensembl:  ENSOMYG00000032017 UniProt:  A0A8C7SNN6 LinkDB All DBs Position 25:18906016..18918846 Genome browser AA seq 1172 aa AA seqDB search MKLTGVFLLLVLWNCEGSRVAESRDDNSVYDLFELVKVNKRHQGVTLVKGADPYSPAYKI LNADLIPPVPEISFRDLIDSIQAERGFLLLVNFKQFKKTRGSLLTVERDDGSGPLFEIIS NGKAQTLDVVYSTGNKQQVVSIEDADLATGHWKNITLFIQEDRAQLFVGCEEINISEMDV PIQKVLTHEVADIARLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCQSSATLTDV MTLDNPVNGSSPAIRTDYTGHKTKDIQQVCGFSCEDITSMFKELKGLGVIVKQLSNELNR VNKESTLLMNQMNIHSGVCLHNGIVHKDKDEWTVDDCTECTCQNSATVCRKISCPLMPCA NATVPDGECCPRCGNPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGQG RETEVCQESPCPINGGWGPWSLWDTCSVTCGGGLQTRQRLCNNPAPKYNGKECQGDTKTS QLCGKEDCPINGCLSNPCFAGAKCTSFDDGSWKCGSCPVGYTGNGINCKDIDECNEVPDA CFTLNAVHRCENTEPGYNCLACPPRYSGPQPFGRGVEQATAKKQVCTPRNPCQDGTHDCN KNANCIYLGQFSDTMFRCECKPGYAGNGHICGDDTDLDGWPNKDLLCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDACDHDDDNDGIPDDRDNCPMVYNPAQYDVDTDDVGDRCDNCV HESNPDQVDTDNNGEGDACAIDIDGDGILNERDNCPYVYNVDQRDTDGDGVGDHCDNCPL EHNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNMDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNILDIYDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTRAQGYSGVSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDYTAYRWHLVHRPKSGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGMYVFSQEMTYFSDLKYECRDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagctgacaggagtttttctccttttggtgctttggaattgtgagggcagcagggtg gcagagagtagagatgataacagtgtatacgacctattcgagcttgtgaaagtgaacaaa aggcaccaaggtgttaccttggtaaaaggcgcagatccttacagcccagcctataagatc ctgaacgcagacctgatccccccggttcccgagatctccttcagggacctcattgattcg atacaagctgagaggggattccttctcctggtcaacttcaagcagttcaaaaaaaccagg ggcagtcttttgactgtggagagagatgacggatcaggaccgttattcgaaatcatttct aatggcaaggcgcaaactctggatgtggtatactccaccgggaacaagcaacaggtagtg tccatagaagatgcggatctagcgactggacactggaagaatatcacgctgttcattcag gaggatcgtgcccagctgttcgtcgggtgtgaagagatcaatatatcagaaatggacgta cccatccaaaaggtcctgacgcatgaggttgccgacattgcccgtctgaggatcggaaaa ggagctgtgaaagatagatttatgggagtgcttcagaacgtgcgcttcgtttttggaacc actttggaggcgattttacgcaataagggatgccaaagctctgcaactttgactgatgtc atgacactggacaatccagtaaatgggtccagcccagcaataaggactgattacactggc cacaaaaccaaagatattcagcaggtctgtggtttttcctgtgaggatatcaccagcatg ttcaaggagctcaaggggcttggtgtgattgttaagcagctgtcaaatgagctcaacaga gtgaataaggagagcactctgctcatgaaccagatgaacatccacagtggggtctgtctt cacaacggcattgtgcacaaggacaaagatgagtggactgtggacgactgcacagagtgt acctgccagaactctgccactgtgtgtcgcaaaatctcttgccccctgatgccctgtgcc aatgccaccgtgcctgatggagagtgctgcccacgttgtggaaacccgagtgactatgct gaggatggctggtccccctggtctgaatggacccattgttctgtgtcttgtggacggggt atccagcagcgaggtcgctcctgcgaccgcatcaacagcaactgcgaaggcacttccgtg cagacccgcgactgctaccctcaggaatgtgacaagcgctttaagcaggatggtggctgg agccactggtctccctggtcttcctgctctgtgacctgtggtgagggagtcatcacccgc atccgcctctgcaactcccccactccccagatgggaggcagagactgtcaaggacagggc cgagagacagaggtctgccaggaatcaccttgtccaattaacggaggctggggaccctgg tctctgtgggacacctgttctgtcacctgtggaggaggactccagactcgccagcgtctc tgtaacaaccctgcccccaagtacaatgggaaggaatgtcagggtgacaccaaaacatcc caattgtgtggcaaagaggactgccctattaatggctgtctgtccaacccgtgctttgct ggagctaagtgtaccagctttgatgatggttcctggaagtgtggctcatgcccagtgggc tacaccggaaacggcatcaactgcaaggacatcgacgagtgcaatgaggtccctgatgca tgcttcacactcaacgcagtccaccgctgtgagaacactgagcctggctacaactgcctt gcctgcccccctcgctactcaggaccacagcccttcgggaggggagtggagcaggccaca gccaagaaacaggtgtgcacacctcgtaacccctgccaagacggcacccatgattgcaac aagaatgctaactgtatctacctgggtcagttcagcgacaccatgttccgctgtgagtgc aaacctggttacgctggcaatggccacatctgtggagatgacaccgacctggatggatgg cccaacaaagacctcctgtgtgtggagaacgccacctaccactgcaagaaagacaactgt ccaaaccttcccaactctgggcaggaggaccatgacaaagatgggcttggtgacgcttgc gatcacgatgatgacaatgatgggatccctgatgatagggacaactgcccaatggtctac aaccccgctcagtatgatgtggacacagatgacgttggtgatcgctgtgataactgtgtg catgagagcaaccctgaccaagtcgacacagacaacaacggcgagggagatgcctgtgct attgacattgacggtgatggtattctaaatgagagggacaactgcccctatgtctacaat gtggaccagagagacactgacggggacggagtgggagaccactgcgacaactgccctctt gagcacaacccagaccagattgactctgactcagatcgtgtgggtgacaagtgcgacaac aaccaggacattgatgaggacggtcatcagaacaacatggacaactgtccctatatcccc aacgccaaccaggccgaccacgacaaagatggcaagggtgacgcctgcgaccacgatgac gacaacgacggtatccctgacgacaaggacaactgcaggctggcctttaaccctgaccag ctggactctgatggtgatggtcgtggagatgtttgcaaagatgactttgaccaagataac atacttgatatctacgatgtgtgccctgagaactttgccatcagcgagacggacttccgc aggttccagatggtaccactggaccccaagggcacctcccagatagaccccaactgggtg gtccgccaccagggcaaagagctggtgcagactgtcaactgtgaccctggcatcgctgtt gggttcgatgagtttaacgcagtggacttcagtggaacgttcttcatcaacacagacagg gatgatgactacgctggctttgtgtttggctaccagtccagctccaggttctatgtggtg atgtggaagcagatcacacagacctactggtcccacaccccgaccagagctcagggctac tctggagtgtccatcaaagtagtcaactccaccacaggacctggggagcatctgaggaac gccctttggcacaccggtgacactgctggacaggtacgtactctgtggcacgaccccaag aacattggctggaaagactacactgcctacagatggcacctggtccacaggcccaagtcg ggactcatcagagttgtgatgtatgaaggcaagagaatcatggcggattctggaaatatc tacgacaagacttatgctggtggaagactaggcatgtatgtcttctctcaggagatgaca tacttctcagacctcaaatacgaatgcagagattcataa

DBGET integrated database retrieval system