Oncorhynchus mykiss (rainbow trout): 110505508 Help Entry 110505508         CDS       T07259                                  Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy04115   p53 signaling pathway omy04145   Phagosome omy04148   Efferocytosis omy04350   TGF-beta signaling pathway omy04510   Focal adhesion omy04512   ECM-receptor interaction omy04518   Integrin signaling omy04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:omy00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     110505508   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110505508    04518 Integrin signaling     110505508  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     110505508    04148 Efferocytosis     110505508   09143 Cell growth and death    04115 p53 signaling pathway     110505508   09144 Cellular community - eukaryotes    04510 Focal adhesion     110505508   09142 Cell motility    04820 Cytoskeleton in muscle cells     110505508  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:omy04131]     110505508   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:omy00536]     110505508 Membrane trafficking [BR:omy04131]  Endocytosis   Phagocytosis    Opsonins     110505508 Glycosaminoglycan binding proteins [BR:omy00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110505508 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 TSP1_ADAMTS cEGF TSP1_CCN Laminin_G_3 EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  110505508 NCBI-ProteinID:  XP_021440442 Ensembl:  ENSOMYG00000032017 UniProt:  A0A8C7SNN6 LinkDB All DBs Position 25:18906016..18918846 Genome browser AA seq 1172 aa AA seqDB search MKLTGVFLLLVLWNCEGSRVAESRDDNSVYDLFELVKVNKRHQGVTLVKGADPYSPAYKI LNADLIPPVPEISFRDLIDSIQAERGFLLLVNFKQFKKTRGSLLTVERDDGSGPLFEIIS NGKAQTLDVVYSTGNKQQVVSIEDADLATGHWKNITLFIQEDRAQLFVGCEEINISEMDV PIQKVLTHEVADIARLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCQSSATLTDV MTLDNPVNGSSPAIRTDYTGHKTKDIQQVCGFSCEDITSMFKELKGLGVIVKQLSNELNR VNKESTLLMNQMNIHSGVCLHNGIVHKDKDEWTVDDCTECTCQNSATVCRKISCPLMPCA NATVPDGECCPRCGNPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGQG RETEVCQESPCPINGGWGPWSLWDTCSVTCGGGLQTRQRLCNNPAPKYNGKECQGDTKTS QLCGKEDCPINGCLSNPCFAGAKCTSFDDGSWKCGSCPVGYTGNGINCKDIDECNEVPDA CFTLNAVHRCENTEPGYNCLACPPRYSGPQPFGRGVEQATAKKQVCTPRNPCQDGTHDCN KNANCIYLGQFSDTMFRCECKPGYAGNGHICGDDTDLDGWPNKDLLCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDACDHDDDNDGIPDDRDNCPMVYNPAQYDVDTDDVGDRCDNCV HESNPDQVDTDNNGEGDACAIDIDGDGILNERDNCPYVYNVDQRDTDGDGVGDHCDNCPL EHNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNMDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNILDIYDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTRAQGYSGVSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDYTAYRWHLVHRPKSGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGMYVFSQEMTYFSDLKYECRDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagctgacaggagtttttctccttttggtgctttggaattgtgagggcagcagggtg gcagagagtagagatgataacagtgtatacgacctattcgagcttgtgaaagtgaacaaa aggcaccaaggtgttaccttggtaaaaggcgcagatccttacagcccagcctataagatc ctgaacgcagacctgatccccccggttcccgagatctccttcagggacctcattgattcg atacaagctgagaggggattccttctcctggtcaacttcaagcagttcaaaaaaaccagg ggcagtcttttgactgtggagagagatgacggatcaggaccgttattcgaaatcatttct aatggcaaggcgcaaactctggatgtggtatactccaccgggaacaagcaacaggtagtg tccatagaagatgcggatctagcgactggacactggaagaatatcacgctgttcattcag gaggatcgtgcccagctgttcgtcgggtgtgaagagatcaatatatcagaaatggacgta cccatccaaaaggtcctgacgcatgaggttgccgacattgcccgtctgaggatcggaaaa ggagctgtgaaagatagatttatgggagtgcttcagaacgtgcgcttcgtttttggaacc actttggaggcgattttacgcaataagggatgccaaagctctgcaactttgactgatgtc atgacactggacaatccagtaaatgggtccagcccagcaataaggactgattacactggc cacaaaaccaaagatattcagcaggtctgtggtttttcctgtgaggatatcaccagcatg ttcaaggagctcaaggggcttggtgtgattgttaagcagctgtcaaatgagctcaacaga gtgaataaggagagcactctgctcatgaaccagatgaacatccacagtggggtctgtctt cacaacggcattgtgcacaaggacaaagatgagtggactgtggacgactgcacagagtgt acctgccagaactctgccactgtgtgtcgcaaaatctcttgccccctgatgccctgtgcc aatgccaccgtgcctgatggagagtgctgcccacgttgtggaaacccgagtgactatgct gaggatggctggtccccctggtctgaatggacccattgttctgtgtcttgtggacggggt atccagcagcgaggtcgctcctgcgaccgcatcaacagcaactgcgaaggcacttccgtg cagacccgcgactgctaccctcaggaatgtgacaagcgctttaagcaggatggtggctgg agccactggtctccctggtcttcctgctctgtgacctgtggtgagggagtcatcacccgc atccgcctctgcaactcccccactccccagatgggaggcagagactgtcaaggacagggc cgagagacagaggtctgccaggaatcaccttgtccaattaacggaggctggggaccctgg tctctgtgggacacctgttctgtcacctgtggaggaggactccagactcgccagcgtctc tgtaacaaccctgcccccaagtacaatgggaaggaatgtcagggtgacaccaaaacatcc caattgtgtggcaaagaggactgccctattaatggctgtctgtccaacccgtgctttgct ggagctaagtgtaccagctttgatgatggttcctggaagtgtggctcatgcccagtgggc tacaccggaaacggcatcaactgcaaggacatcgacgagtgcaatgaggtccctgatgca tgcttcacactcaacgcagtccaccgctgtgagaacactgagcctggctacaactgcctt gcctgcccccctcgctactcaggaccacagcccttcgggaggggagtggagcaggccaca gccaagaaacaggtgtgcacacctcgtaacccctgccaagacggcacccatgattgcaac aagaatgctaactgtatctacctgggtcagttcagcgacaccatgttccgctgtgagtgc aaacctggttacgctggcaatggccacatctgtggagatgacaccgacctggatggatgg cccaacaaagacctcctgtgtgtggagaacgccacctaccactgcaagaaagacaactgt ccaaaccttcccaactctgggcaggaggaccatgacaaagatgggcttggtgacgcttgc gatcacgatgatgacaatgatgggatccctgatgatagggacaactgcccaatggtctac aaccccgctcagtatgatgtggacacagatgacgttggtgatcgctgtgataactgtgtg catgagagcaaccctgaccaagtcgacacagacaacaacggcgagggagatgcctgtgct attgacattgacggtgatggtattctaaatgagagggacaactgcccctatgtctacaat gtggaccagagagacactgacggggacggagtgggagaccactgcgacaactgccctctt gagcacaacccagaccagattgactctgactcagatcgtgtgggtgacaagtgcgacaac aaccaggacattgatgaggacggtcatcagaacaacatggacaactgtccctatatcccc aacgccaaccaggccgaccacgacaaagatggcaagggtgacgcctgcgaccacgatgac gacaacgacggtatccctgacgacaaggacaactgcaggctggcctttaaccctgaccag ctggactctgatggtgatggtcgtggagatgtttgcaaagatgactttgaccaagataac atacttgatatctacgatgtgtgccctgagaactttgccatcagcgagacggacttccgc aggttccagatggtaccactggaccccaagggcacctcccagatagaccccaactgggtg gtccgccaccagggcaaagagctggtgcagactgtcaactgtgaccctggcatcgctgtt gggttcgatgagtttaacgcagtggacttcagtggaacgttcttcatcaacacagacagg gatgatgactacgctggctttgtgtttggctaccagtccagctccaggttctatgtggtg atgtggaagcagatcacacagacctactggtcccacaccccgaccagagctcagggctac tctggagtgtccatcaaagtagtcaactccaccacaggacctggggagcatctgaggaac gccctttggcacaccggtgacactgctggacaggtacgtactctgtggcacgaccccaag aacattggctggaaagactacactgcctacagatggcacctggtccacaggcccaagtcg ggactcatcagagttgtgatgtatgaaggcaagagaatcatggcggattctggaaatatc tacgacaagacttatgctggtggaagactaggcatgtatgtcttctctcaggagatgaca tacttctcagacctcaaatacgaatgcagagattcataa

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