Oncorhynchus mykiss (rainbow trout): 110506299
Help
Entry
110506299 CDS
T07259
Name
(RefSeq) oxysterols receptor LXR-alpha isoform X1
KO
K08536
liver X receptor alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03320
PPAR signaling pathway
omy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110506299
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
110506299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110506299
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omy03310
]
110506299
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110506299
Nuclear receptors [BR:
omy03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
110506299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
110506299
NCBI-ProteinID:
XP_021441439
Ensembl:
ENSOMYG00000025876
LinkDB
All DBs
Position
26:16636089..16658715
Genome browser
AA seq
430 aa
AA seq
DB search
MKHEGNLLPLEPPHHAGFSSPPQKGPSSLAEKSSPLLMDPSNIKADPAGDMPANTEGQPV
KRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEM
DMYMRRKCQQCRLRKCREAGMLEQCVLSEEQIRGKKMKKNEEETARTSAVVTPTPVPEVV
PLEPEQLEMIEKLVAMQKQCNKRSFIDRPKVTVIPWPQSQDPQNREVRQQRFAHFTELAI
MSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLETSRRYNPAIESITFLKDFSYN
KEDFAKAGLQLEFINPIFEFSKGMNDLHLDEAEYALLIAINIFSAGQRSSDRPNVQDHEL
VERLQQPYVNALRSYIMIKRPNDHLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPP
LLSEIWDVHE
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatgagggcaacctcctccccctggaaccaccccaccatgcagggttttccagc
cccccccagaaagggccttcctcactagctgagaagagcagcccactgctcatggacccc
agcaacatcaaggccgaccccgccggcgacatgcctgccaacacagagggtcagccggtg
aagaggaagaagggtccagcccccaagatgctggggaacgaggtgtgcagcgtgtgcggg
gacaaggcctcgggcttccactacaacgtgctgagctgcgagggctgcaagggcttcttc
cgccgcagcgtcatcaagagtgcccagtactcgtgcaagaacaacggccgctgtgagatg
gacatgtacatgcgccgcaagtgccagcagtgccggctgcgcaagtgccgcgaggcgggc
atgctggagcaatgcgttctctcagaggagcagatccgagggaagaaaatgaagaagaac
gaggaagagactgcacgcacgtctgccgtggtgacccccaccccggtgccggaggtggtc
ccgctggagcccgagcagctggagatgatcgagaagctggtggccatgcagaagcagtgc
aacaagcgctcgttcatcgaccggcccaaagtcacggtgattccgtggccccagagtcag
gacccccagaacagggaggtacggcagcagcgctttgcccacttcaccgagctggccatc
atgtcggtccaggagatagtggactttgccaagcagttgcctggcttcctagagctcacc
agagaggaccagattgcgctgctgaagacctcaaccattgagattatgctgctggaaaca
tcgcggagatataaccctgccattgagagcatcacgttcctgaaggacttcagttataac
aaggaggattttgccaaagcagggctgcagttggagtttatcaaccccatctttgagttc
tccaagggcatgaatgacctgcatctggacgaggcggagtacgctctgctcatcgccatc
aacatcttctctgcaggtcagaggtcaagtgaccggcccaatgtgcaggaccatgaactg
gtggagcgactgcagcagccgtatgtgaacgcacttcgttcttacatcatgataaagaga
ccaaacgatcatctgatgtttccacgcatgctcatgaagctggtcagcctccgcaccctc
agcagcgtccactctgagcaggtctttgccctgcgcctccaggacaagaagctcccgccg
ctgctgtctgaaatctgggacgtccacgagtga
DBGET
integrated database retrieval system
