Oncorhynchus mykiss (rainbow trout): 110507873
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Entry
110507873 CDS
T07259
Symbol
mmp13b
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110507873 (mmp13b)
Peptidases and inhibitors [BR:
omy01002
]
Metallo peptidases
Family M10
110507873 (mmp13b)
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_3
Peptidase_M66
DUF4953
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
110507873
NCBI-ProteinID:
XP_021443931
Ensembl:
ENSOMYG00000025851
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All DBs
Position
27:26357361..26365708
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AA seq
464 aa
AA seq
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MEITGLLLLVVVAQSFAMPLSSPEETDKWLLAEKYLRRFYNLRAGLQGTPFHRSSDAMQT
KIREMQSFFNLQVTGSLDANTLELMSMARCGVPDVGEYNHFPRHLKWQNTNVTFRIVNYT
PDLKKADVDRAIHKAFNIWANVTPLTFKKLHEGKADIMIAFGTKEHGDFNPFDGPDGLLA
HAYPPGRDIGGDTHFDEDEHWSIDSDAYNLFLVATHEFGHALGLSHSSDPGALMYPVYSY
SQGYPLSEDDITGIQALYGPNPNDSKVKPKPDAPNKCDPMLSFDAVTELRGETIIFKDRF
YWRLHPQFAEPEQTLIKSTWPSLPNKVDAAYEYPEKDMVFIFSGIRMWALNGYSLVEGYP
KYIHKLGLPKTVRRVDAAVYIPDTGKTLLFSEEQFWSYDEKTNTMDSGFPRSIEMDFPGM
GDEVDAALYKYGYLHFFHEHTQFEYSYSARKVIQIVRTNSFLNC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcacaggtttactgctccttgtggtggttgctcagtcatttgcaatgcctctg
tcatctccggaggagactgacaagtggctattagccgagaaatacctccgcaggttctac
aaccttcgagctggacttcagggaaccccgttccacaggtcgtcagacgccatgcagact
aagatcagggagatgcagtccttcttcaacctccaagtgacagggagcctggacgctaac
accctggaactgatgagcatggccaggtgtggtgtccctgacgtgggggaatataaccac
ttccccagacacctcaaatggcagaataccaatgtgaccttcagaatagtgaattatact
cctgatctgaagaaggctgatgtggacagagctatccataaagccttcaacatctgggct
aatgtcactcctctgaccttcaagaaactgcacgaggggaaggctgacatcatgatagca
tttgggacaaaagaacatggagacttcaacccctttgatggccctgacggtctcttagcc
catgcctatccccctggcagagacattggaggagacacacactttgatgaagatgaacat
tggtcaatagactcagacgcctacaaccttttcctggtcgccactcatgagtttggccat
gcccttggcttgtcccattcttctgatcctggagctctgatgtacccagtctactcctac
agccagggttatccactgtctgaggatgatatcaccggcattcaagctctttatggcccg
aaccccaatgacagcaaagtgaagcccaagccagatgccccaaacaaatgtgaccccatg
ttgagttttgatgctgtcactgagctcagaggagaaacaatcatcttcaaagacaggttc
tactggcgtctccatcctcagtttgcagagcctgagcaaaccctgatcaaatccacctgg
ccctccctcccaaacaaagtggatgctgcctatgagtaccctgagaaagacatggtcttc
atattcagtggtattagaatgtgggccctgaacggctacagcctagtggagggctacccc
aaatacatccataaactgggactccccaagaccgtgcggagggtggatgctgctgtgtac
atcccagacaccggcaagacccttctgttctctgaagagcagttctggagttatgatgag
aagactaacacaatggacagtggcttcccaagatccattgagatggatttccctggaatg
ggagatgaggtggatgctgccttatataaatatggatatttgcatttcttccatgaacat
acacagtttgaatacagctacagtgcaaggaaggtcattcagattgttaggacaaactct
tttctcaactgctga
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