Oncorhynchus mykiss (rainbow trout): 110508753
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Entry
110508753 CDS
T07259
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110508753 (dhx9)
03012 Translation factors [BR:
omy03012
]
110508753 (dhx9)
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110508753 (dhx9)
5.6.2.6 RNA 3'-5' helicase
110508753 (dhx9)
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110508753 (dhx9)
Translation factors [BR:
omy03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110508753 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
nSTAND3
ATPase
AAA_14
Motif
Other DBs
NCBI-GeneID:
110508753
NCBI-ProteinID:
XP_021445207
Ensembl:
ENSOMYG00000026903
UniProt:
A0A8C7RTN3
LinkDB
All DBs
Position
28:22914656..22934260
Genome browser
AA seq
1326 aa
AA seq
DB search
MRPKSRPDRLVPQCYHVCRLNGLYLLAGSFEKVSGGGRVEKYKSAMADIKNFLYAWCGKK
KLTPSYDIRAAGNKNRQKFLCEVRIDGFNYTGMGNSTNKKDAQANAARDFVNYLVRVGEM
NAAEVPALGASGPDFSVPDCGGGGEGGNVGFGSLPPSGPIPPHLVVKAEQVNAPSAPVPG
VTGLGYSGGSGNFSGGGSNSNAPWDRGANLKDYYSKRDEQEAQATLESEEVDLNAGLHGN
WTLENAKARLNQFFQKEKNQTDYKYSQVGPDHNRSFIAEMQLFVRQLGRKIIAREHGSNK
KLAAQSSALSIVRQLYHLGVIEPYSGVTKKKEGEILEAFEVNVVDELQHQLQSMAQELGV
AIPPPPPDPSTPVSLVQGKMAVFEPSQKQSMAGVVPWSPPQVNWNPWTSSNIDDGPLAFC
TPEQISTDLHHELTYQLEQDQSLQKVIGERDGLPVKKFEEEIMTAVQGSSVVIIRGATGC
GKTTQVPQYILDQFIKSGRASECNIIVTQPRRISAVSVAERVSYERGEDVGKSCGYSVRF
ESILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLMVVLRDVVHTYP
EVRIILMSATIDTTMFREYFFNCPVIEVFGRTFPVQEYFLEDCIQMTHFIPPPSDRKRKD
KDEEGGDEEANCNVICGPEYTPETKRSMAQMNEKETPFELVEALLKYIETLQVAGAVLVF
LPGWNLIYSMQKHLEMNPHFGSQRYLILPLHSQIPREEQRRVFEPVPENITKVILSTNIA
ETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWGSKTNLEQRKGRAGRVRAGFCFHL
CSRARFDKLETHMTPEIFRTPLHEVALSIKLLRLGAIGHFLSKAIEPPPLDAVIEAEHTL
RELDALDTNDELTPLGRILAKLPIEPRLGKMMIMGCIFNVGDAVCTISAASCFPEPFIND
GKRLGYVHRNFAGTRFSDHVALLSVFQAWDDVRMGGEDAESRFCEHKRLNMSTLRMTWEA
KVQLKEILINSGFPEECLMTQMFNNVGPDNNLDVVVSLLTYGSYPNVCYHKEKRKILTTE
GRNALIHKCSVNCPFSSQDMTYPSPFFVFSEKIRTRAISAKGMTLVSPLQLILFASKKIT
SNGEIIELDDWIKLKIPHNVAGCIAALRAGMEALVVEVTKDPEYIKQLDPTNERMLNIIR
QISKPSAAGLNLMVNNKRFGDGPRPPKMGRFDGGGGGGYQGGGGGGYRGGGYRGGGGYQG
GGGYQGGGGYRGGGGGYRGGGGGYRGGGGGYRGGGGYGGGNRGGGNRGGYGGGNRGGGGY
GGGQGY
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccaaagtccaggcctgaccgtctcgtcccccagtgctatcatgtctgccgtctg
aatggtttgtatttgctagccggctcgtttgaaaaagtatctggtggaggtcgagtggag
aaatacaaatccgccatggcggacatcaagaacttcctgtatgcttggtgtgggaagaag
aaactaacacccagctatgacattcgagccgctggaaacaaaaaccgacagaagtttctg
tgtgaggttcgtattgacggattcaactacactggaatgggaaactccaccaataagaag
gatgcccaggcaaatgctgctagagactttgtcaattatcttgtccgagttggagaaatg
aatgcagcagaagtcccagcccttggggcaagtggacctgacttcagtgtacctgactgt
ggaggagggggtgaaggagggaatgttggctttggaagtcttcctccaagtggacctatc
cctcctcacctggttgtgaaagctgagcaagtgaatgcaccttctgcgccagtcccaggt
gtcactggtttgggatattcgggcggtagcggcaatttttccggaggtggctcaaacagc
aatgctccgtgggatcgtggggccaatctaaaggactactactcaaagagagatgagcag
gaggcacaggcgactctggagtctgaggaggtagatctgaacgcaggactccatggcaac
tggactttagagaacgccaaggcccgtctgaaccaatttttccagaaggagaagaatcaa
actgattacaaatacagccaagttgggcctgaccacaacaggagctttattgctgagatg
cagttatttgtaagacagcttggcagaaagataattgcccgcgagcatggctctaacaag
aagcttgcagcccagtcctctgcgctgtctatcgtccgtcaactttaccatctgggtgtc
attgagccttattctggcgtcactaagaagaaagagggggaaattttggaagcttttgag
gtgaatgtggtggatgaactgcaacatcagctgcagagtatggcccaagaactgggtgtt
gcaattccacctccgccacctgatccaagtactccagtgtctttggtccaagggaagatg
gctgtgtttgagccctcccagaaacagagcatggccggggtggtgccgtggtcccctccg
caagtcaactggaacccctggaccagcagcaatattgacgatggaccactagcattttgc
accccagagcaaatcagcactgacctccatcatgagctgacttatcaattggaacaagat
caaagcctacagaaggtcattggggagcgagacgggcttccagtgaagaaatttgaggag
gagataatgactgccgttcagggcagctcagtggtgatcattcgaggggcgaccggctgt
ggcaaaaccacccaggttcctcagtacatcctggatcagttcatcaagagtgggagggcg
tccgagtgtaacattattgtaacccagccccggcgtatcagtgcagtgtctgtggcagag
cgtgtttcctacgagagaggagaggatgtcggtaagagctgtgggtacagcgtccgcttt
gaatccatcctcccacgaccccatgccagcatcatgttctgcactgttggtgtgttactg
cggaagctggaagcaggtattcgcgggatcagccatgtgattgtggatgaaatccacgag
agagacatcaatactgacttcctcatggtggtgctgagggacgtggtccacacctaccca
gaggtccgcatcatcctcatgtctgccaccatcgacaccaccatgtttagagagtacttc
ttcaactgccctgtcatcgaggtgttcggccgcacattcccagtacaagagtactttttg
gaagattgtattcagatgacacatttcattccacctccgagtgatagaaagaggaaggac
aaggatgaggaaggaggagatgaagaggccaactgtaatgtgatatgtgggccagagtac
accccagagactaagcgctctatggcccagatgaatgagaaggagactccctttgagctg
gtggaggccctgctgaagtacatcgagaccctccaggtggccggggctgtgctcgtcttc
ctgcccggctggaacctcatctactccatgcagaaacacctggagatgaacccacacttt
gggagtcaacggtacctgattctgcctctccactctcagatccccagagaggaacagagg
agggtatttgagcctgtgcctgaaaacatcaccaaggtgatcttgtcaacaaacattgca
gagaccagtattactatcaatgatgtagtatatgtcatcgactcttgcaagcagaaagtg
aaactgttcacatctcacaacaacatgaccaactacgccacagtctggggctccaagacc
aacctggagcagaggaagggtcgtgccggccgcgtccgggctggcttctgctttcatctg
tgtagcagagcacgcttcgacaaactggagacccatatgacccctgagatattccgtact
cctctccacgaggtagccctgagcatcaagctgctgagactaggagccattggccatttc
ctttccaaggccatcgagccccctcccctggacgcggttatagaggcagaacacacactg
agagaactggatgctttggacacaaatgacgagttgactccgcttggtcggatccttgca
aagcttccaatcgagccgcgtctggggaagatgatgattatgggctgcatattcaatgtt
ggagatgcggtgtgcacgatctcagcagcctcctgcttcccagagcccttcatcaatgat
ggcaagcgcttgggctatgtgcaccgcaactttgctggcacccgcttctcagaccacgtg
gccctcctgtcagtcttccaggcttgggacgatgtgagaatgggaggtgaggatgcagag
tccagattctgtgaacacaagaggctcaacatgtccacactgaggatgacctgggaggca
aaagtgcagctgaaggagatcctcatcaactctggcttccctgaggagtgcttgatgaca
cagatgttcaataacgttggacccgacaacaaccttgacgtggtcgtctctctcctgaca
tacggctcctatcccaacgtgtgctaccacaaggagaagaggaagattctcaccactgag
gggcgcaatgccctcatccacaaatgctccgtcaactgccccttcagcagccaggacatg
acctacccatcaccgttcttcgtctttagcgaaaagatccggactcgagccatctcagcc
aaaggaatgacactagtcagcccactccagctgatcttgtttgcctccaagaaaatcaca
tcaaacggggaaatcattgaactggatgattggatcaaactgaagataccgcataacgtg
gctggctgcatagctgctttgagggctggaatggaggcacttgttgtagaagtcaccaaa
gaccctgagtacatcaaacagctggatcccacaaacgagcgcatgctcaacatcatccgt
caaatctccaagccctccgcagctgggcttaacctcatggtcaacaataaacgttttgga
gatggtccacgtcctcccaagatgggcaggtttgacggaggaggcggtggaggataccag
ggaggaggcggtggaggatacaggggaggaggttacagaggcggtggaggataccagggc
ggtggaggataccagggcggcggcggatacaggggcggtggtggaggttacagaggcggt
ggtggaggttacagaggcgggggtggaggttacagaggtggtggtggttatggagggggg
aacaggggtggggggaacaggggtggttatggaggggggaacaggggtgggggtggttat
ggagggggccagggatattag
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