Oncorhynchus mykiss (rainbow trout): 110508877
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Entry
110508877 CDS
T07259
Name
(RefSeq) RT1 class I histocompatibility antigen, AA alpha chain isoform X1
KO
K06751
MHC class I antigen
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
omy04145
Phagosome
omy04218
Cellular senescence
omy04514
Cell adhesion molecule (CAM) interaction
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110508877
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110508877
04145 Phagosome
110508877
09143 Cell growth and death
04218 Cellular senescence
110508877
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110508877
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110508877
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omy00537
]
110508877
Exosome [BR:
omy04147
]
Exosomal proteins
Proteins found in most exosomes
110508877
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omy00537
]
Antigens
110508877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
Ig_2
Motif
Other DBs
NCBI-GeneID:
110508877
NCBI-ProteinID:
XP_021445426
Ensembl:
ENSOMYG00000046154
UniProt:
A0A8C7V2E3
LinkDB
All DBs
Position
28:complement(29228842..29239200)
Genome browser
AA seq
434 aa
AA seq
DB search
MFRYLCIFMLFSLISQSDVKLGSEEEHILEYMYTFFNSSHYEVVGLLDGEPVDFYSSVLK
SPVPKKIWNEKERSFGNQYWQDHITSRQKIDKWFLSSAEDLKMHMTKNQSGDVVQMRFGC
KNIPERNPVHDEETLFAEFAYDGETTMNFIHNTNKWTPVDFAAQLIINNWNRKRSIKYQI
TNFLNVECYQALYNFQKFELNATQYNNSSDPLIYTVPRGSLKPGHNNLTCLVTGTYPSSS
PIEMNLFRNNVNLTEMEGVRSSGVRPNEDNTYQLRKTVMINASESEVYQCVVNHKSFPGT
RKNTWEVKKSEESSGGIKSSFYWTIGLPFFLLAVLVVVVVVWFFKYKWRSEPNRHLAANP
EENAALGVQDGGSLIDQGGETTSVDLSSEREDLTNAPDAEGENDEAYGSRGSSDSDLSQI
QRTLLEFNTDPADN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgttccgatacttatgtatattcatgcttttctcgttaatttcccaatctgatgtaaag
ttaggctctgaagaggaacatatacttgagtacatgtacaccttctttaattcctcccac
tatgaagttgttggtttgttggatggggaaccagtggatttctacagtagtgttctcaag
tcccctgtacctaaaaagatctggaatgaaaaggagagaagctttgggaatcagtactgg
caagaccatattacaagtcgacagaagattgataagtggtttttatccagtgctgaagac
ctgaaaatgcacatgacaaaaaatcaaagcggtgatgttgtgcagatgaggtttggctgt
aagaacatccctgaacgcaaccctgttcacgatgaggaaaccctgtttgctgagtttgcc
tatgatggagaaacaacaatgaacttcattcataacacaaataaatggactccagtagat
tttgctgctcagttaattataaacaattggaacagaaaaaggagcatcaaatatcaaata
accaactttctgaatgtggaatgttatcaggcactctataattttcagaaatttgaactc
aatgcaactcagtacaataactcatctgatccacttatctacactgtccctcgtggctct
ctaaaacctgggcacaacaacctgacgtgtctagtaaccggaacctatcccagctcctca
cccatcgagatgaatctgtttaggaataatgtaaacctaacagagatggagggtgtccgg
tcatcaggggtcagacctaacgaagacaatacctaccagctgagaaagacagtgatgatt
aatgcctccgagtctgaagtgtatcaatgtgtggtcaatcataaaagctttcccggaaca
cggaaaaacacttgggaggtgaaaaaaagtgaagagtcaagtggagggatcaaatccagc
ttctattggactattggactaccgttttttctactggctgttttagtggttgtggttgtt
gtatggtttttcaaatacaaatggagatctgagcctaatagacatttggctgctaatcct
gaagagaatgctgccctgggagttcaagatggagggagtttgattgatcaaggaggtgaa
accacttctgtcgatctgtcctctgagagagaagatcttacaaatgcacccgatgctgaa
ggtgaaaacgatgaagcctatggaagtcgtggaagctctgattcagacctgtcacagatt
caacgaaccttattggaattcaacacagacccagctgacaactag
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integrated database retrieval system
