Oncorhynchus mykiss (rainbow trout): 110509115
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Entry
110509115 CDS
T07259
Symbol
dsela
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
omy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
110509115 (dsela)
Enzymes [BR:
omy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
110509115 (dsela)
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Gene cluster
GFIT
Motif
Pfam:
DUF4962
Sulfotransfer_3
Sulfotransfer_1
Motif
Other DBs
NCBI-GeneID:
110509115
NCBI-ProteinID:
XP_036822742
Ensembl:
ENSOMYG00000034700
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Position
28:36596099..36602659
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AA seq
1189 aa
AA seq
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MAEKCAGRSVVLFSLLAVVVSFSGITDVLGENNIDEELEKITFQGDGSTNGHPENWPANL
HPNLYFHQVDIRLLQQRSATTHRHIFKVIRLAVGTMLANTALYLPPVKHEEFSSKWNEIY
GNNLPSLALYCLLCPKDTAAHQFLMRYMDQMAVYPNWTVTSAPNDEVPMAHSLTGFATAY
DFIYPLLDTSRRARYMKKIRVATEELYELSKHRGWGKQFLQNHQTTNILAILTGALVVGA
HSDPETMMWKQVAVNYMEKTMFLLSHVVDGSLDEGVAYGSYTAKSITQYVFLARRHFDID
NTQNNWLRAHFWFYHSTLLPGFQRTVGIADSNYNWFYGPESQLVFLDAFVLRDGTGNWLA
QQIWKHRPKDGPMEQSAAQRWATLHTEFLWYDSELSKQPPAGFGKAVLHMFSNWGVVTYG
AGLSYGQGNTFVSFKSGKLGGRAVYDIVHSKPYSWLEGWSNFNPGHEHPDQNSFTFAPNG
QVFVSEALYGPKYSYLNNVLTFAPSPTSQCNQPWEGQLGECGKWLRWAEPEVGNTASEVI
AAASHGDSLFVSGEAASAYSSVMGLKSVYRALVLLNSQILLVFDHVEKSKESPLSTLSAF
FHNLDIDFKYVPHRALDRYNGALMDVWDAHYQMFWFDSQGNSPVARIQEAEQAAEFKKRW
TQFVNVTFPMEGTVTRVAYLMHSPNVKISNCRFIDNSKNGVRLSIVVNGTESIVSIVTNY
NDIGARYSYLGFGGYAKMQSRHQIIHFGLGVQTMTEQNTVDPVYDFGFMVNIVGGLTLCL
AIGFLILQRTFYFCFRKIMRYTLTFVLLLWVVEFLFVSNSCDWLVCVQSVSDLPPNPLPT
VVVTSLPGSGAEVLKPLFYNSSDFVYLQVPTEHLVIPDTEFNFDPLVDACVWSRLDAERG
HYKAIQGWFHSLVYNPRLHLQNIQLHNEGSRNEIEVELSGKRRKPIRRQSGSRGSSDRDG
EYVRELRRHMEKYPNARPVLSLSSGSWTLKLPFFREVVGHSFRALHVVRDPRAWIYLMLY
NSEPSLYSRKNVQKHVAAIFKQERNGGRSKCTLGFTQEFLTLHSVLSDPEMEPVLLLAHL
WLAHTTTALQVNGDLTASYLHVKFEDIVQYPEETAGKIHTFLGVPVAPAALNQLMFATST
NLYNLVYEGDISPVSINVWREKMPIHEIRMIEDTCLKVMERLGYSRYLS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaatgcgcaggacggtctgtggttttattctcactcttggccgttgtagtt
tccttctcaggaattactgatgttttaggggaaaataatattgatgaggagttggagaaa
atcacatttcaaggagacggaagcaccaacgggcatccggaaaactggccggcgaacctt
caccctaacctgtattttcaccaggtggacatacgtttactgcagcagagatctgccacg
acgcacagacatatttttaaagttatccggcttgctgttgggactatgctcgccaatact
gctctctatctacccccggttaagcatgaggaattttccagcaaatggaatgaaatttat
ggcaacaatctcccctctctcgctctgtactgtttgctctgccccaaagatacagctgcc
catcaattcttaatgagatacatggaccagatggcagtgtaccctaactggacggtgacc
agcgctcccaacgacgaggttcccatggctcactccctcacaggatttgccacagcctat
gacttcatctaccctctcctggacacatcgcgaagggcacgctacatgaagaaaatacgt
gtcgccacagaggagctgtacgaactctccaaacacaggggatgggggaagcagttttta
cagaatcatcagactaccaacatcttagccatcctgaccggcgccctcgtggtgggagca
cacagtgacccggagacaatgatgtggaagcaggtggccgttaactacatggaaaagacc
atgttcctcctcagtcacgtagtggatggctcgctagacgagggtgtggcctatgggagc
tacaccgcaaagtccatcactcagtacgttttcctggcgcgccgccacttcgacatcgac
aacacccagaacaactggttgcgggcgcacttctggttctaccactccacacttctgcca
ggcttccagaggacagtgggcatcgctgactccaactacaactggttctatggaccggag
agtcagctggtgttcctcgatgcatttgtgctccgggacggcaccggaaactggctggcc
cagcagatctggaaacatcgtcccaaagatggccccatggagcagtcagcagcccagcgc
tgggccaccttacacactgagttcctgtggtatgatagtgagctctccaagcaaccacca
gccgggtttggcaaagcagtactgcacatgttctcaaactggggtgtggtgacttacggg
gctggtttatcatatggtcaaggcaacacatttgtctccttcaaatcggggaagctgggc
ggtagggcggtctatgatattgtccattccaagccctactcctggctggagggctggagc
aatttcaatccgggccatgagcacccagaccagaactcctttacctttgcccctaatgga
caggtatttgtttcagaggcactgtacggccccaaatacagctacctcaacaatgtcttg
acgtttgccccgtctcccacaagccagtgcaatcagccctgggagggccagcttggagag
tgcggcaagtggctgcggtgggcggagcctgaggtcggcaacacagccagtgaggtcatt
gcagctgcatcccatggggattctctgttcgttagtggagaagcggcatcggcctactcc
tctgtgatggggctgaagagcgtataccgtgcccttgtcttgctcaactctcagattctg
ctggtgtttgaccatgtggaaaaaagcaaggagtctccgttgagtactctgagtgctttc
tttcacaacttggacattgattttaaatacgtccctcacagggctttagacaggtacaat
ggggcactgatggacgtttgggatgctcactaccaaatgttttggtttgacagtcagggg
aatagtccagtggcgagaatacaggaggcagagcaggctgctgagtttaagaaacgatgg
acccagtttgtcaacgtgacctttccaatggagggcacggtcaccagagtggcctatttg
atgcacagtcccaatgtcaaaatctccaactgcagattcatcgacaatagtaaaaatgga
gtacgactctctattgtcgtcaacggcacagaatccattgtgtccatcgtaacaaactac
aatgacattggcgccagatatagctacttgggctttgggggatatgcaaagatgcaaagc
aggcatcagataatccacttcggtctgggagttcaaacgatgactgaacaaaacactgtg
gatccagtctatgactttgggtttatggttaatatagtgggagggctgacactgtgtctc
gccattgggtttttaatcctgcaacgcacgttttatttctgcttccgcaagatcatgcgc
tatactttaacgtttgttctcctgctgtgggttgttgagtttctgtttgtctccaatagc
tgtgattggcttgtctgtgtccaatcagtgtccgatctgcccccaaaccctctccccaca
gtcgtcgttacatccctgccagggtctggggctgaagttctcaagccccttttctataac
agctctgattttgtttatctccaagtccccacagagcacctagtcatcccggacactgag
ttcaactttgaccccctggtggatgcctgcgtgtggtccagactagatgcggaaagaggt
cactacaaggccatccagggctggttccattccttggtctataaccctagacttcacctg
cagaacattcagttgcacaacgagggcagcaggaatgagattgaggtggagctttctggc
aagaggaggaagccaattcgtaggcagtcagggtcaagggggagttcagatagagatggg
gagtatgttcgggagctaaggcggcacatggagaagtaccctaatgcccgccctgtcctc
agcctgagcagcgggagctggaccctgaaactcccgtttttccgagaggtggtcggtcac
tcatttcgggcgttgcacgtggtgcgagatcctcgcgcttggatttaccttatgctctac
aacagcgagccaagcctctattctcgcaagaatgtgcaaaaacacgtcgctgcaattttt
aagcaagagaggaacggcgggagaagcaagtgtacactagggttcacccaggaattcttg
acattgcacagcgtcctctctgatccagagatggagccggtgctgctactggcccatctg
tggctggcccacacaaccacggcactccaggtcaacggcgacctcaccgcctcttacctc
catgtgaaatttgaggacattgtgcaatatcctgaggagacagctggaaagatacacacg
tttctcggggttcccgtggccccagctgccctcaaccagctcatgttcgccacctccacc
aacctgtacaacctggtgtatgagggagacatatcgccagtcagcatcaatgtgtggaga
gaaaaaatgcccatccacgagatcagaatgatagaggacacatgcttaaaggttatggag
aggcttgggtactcaaggtacttaagttaa
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integrated database retrieval system
