Oncorhynchus mykiss (rainbow trout): 110509154
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Entry
110509154 CDS
T07259
Name
(RefSeq) polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110509154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110509154
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
110509154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
110509154
NCBI-ProteinID:
XP_021445802
Ensembl:
ENSOMYG00000027823
LinkDB
All DBs
Position
3:11411388..11420807
Genome browser
AA seq
807 aa
AA seq
DB search
MDAGDDQNTGPTNGNAPSAGNSRPPQIAHMSLYERQAVQALQALQRQPNAAQYFQQLMLQ
QQINSAQQLHNLAAVQQATLAASRQSNSPNHSVSQATTTVNLSTTSGGGTMTNPRPLGPA
TSVTSSALSQSVLLGGNSAGQGQMYLRVNRSLRAPLAASQLIFMPGGSATAAVATVAQQQ
PQQQQQQQEVHPTSNAQSDNDQVQNLALHCISTPRVAAVKTEFPDRRDAANYSLSQQQQH
PQQQQQQFSQNTQQQQQHMANKLTSYTHPTALPSINVKTGNQLNMAPTAATSVPASSSPS
PTLPLSQLLISPSGLCQARAVTTVTPAATVTHILVPTSNVPTSSQGYPIGSVAPKTNVNT
QTLVVQPLQQSNTNLDKVSHSSGPVHIQPKTSQGHRLPVQLSPRHPPPILPAPPNTGGNH
PPHVPVQLVGARQGSVGNSQALAQARSCCPQDNGIAIASTGGNTTAKPAIGSLKRKSETD
ATNEMVVEPSQLCCPPMRDSAPLSPAPTMDSAPKVVPAFSSPPTLSLPLSWGVGGQGDRA
PLPQAVVKPQVLTHLIEGFVIQEGAEPFPVTGPVKEPLAMGVQQADNGGPAVLKCEYCES
LAPASQFRGSKRFCSKTCAKRYNVSCSHHFQVSRGRASARPPGPPVPPDNIVRRRGPRRS
SSEIACAKIAGRHLPVKECRSESSRSEDVSSCDEEEEEDSPSLSPSSSLSCPRPAHCDPH
LDDSAQGSLPLDEANFLSGSPAHWGVEEVCRFISSLQGCEELAAQFLSQEIDGQALLLLR
EEHLISTMNIKLGPALKICAFINSLRD
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggtgatgaccagaacacgggtcctaccaatgggaatgcgccgtctgctggg
aactcccgccctccccagatagcccacatgtctctgtatgagaggcaagctgtgcaggcc
cttcaggcgctgcagagacagccgaacgcagcccagtacttccagcagctcatgctgcag
cagcaaatcaacagtgcccagcagcttcacaacctggctgccgtgcaacaggccaccctc
gctgctagtcgccagtccaactctcccaaccacagtgtctcccaagcaaccaccactgtc
aatctgagcaccacctctgggggagggaccatgaccaatccccgccccctcggccctgcc
acatcagtgacatcatcagctctcagccaatcagtgctgctgggtgggaactcagccgga
cagggccagatgtacctgagagtcaaccgctccctcagggcacccctcgcagcctcccag
ctcatcttcatgcctggtggctcagcaacggctgcggtagcgacagttgcacagcaacag
cctcagcaacaacagcagcaacaggaagtccatcccacctccaatgcccaatccgacaat
gaccaggtgcaaaacctggctctccactgtatctccactcccagagtggccgcagtgaag
acagagtttccagacaggagagacgcagccaactattctctaagtcaacaacaacagcat
cctcagcagcaacagcagcagttctctcagaacacccagcagcaacagcaacatatggcc
aacaaactgactagctacactcatcccactgctctccccagtataaatgtcaagactgga
aaccagctgaatatggccccaaccgctgccacctcagttcccgcctcctcctccccctct
cccacactccctctctcccagctcctcatctccccctcaggcctatgtcaggcccgggcg
gtaaccacagttacccctgctgccacggtgacgcacatcctagtccccacctccaacgtt
cctacctcctctcaaggctaccccataggttcagtcgcccccaaaactaacgtcaacacc
cagaccttggtggtgcagccactgcagcagtccaacactaacttggacaaggtgagccac
agctctggccctgtgcacatacagcccaaaacctcacagggtcaccgcttacctgtccag
ctttccccacgccaccctccacctatcctcccggctccgcccaacacggggggcaaccac
ccgccccatgtcccagtccagctggtgggagctaggcagggctcagtaggaaactcccag
gctttggcacaggcccgaagctgctgcccccaggacaacggcatcgctatagcctctact
ggagggaacaccacggcaaagcctgcaattggctcattgaagaggaagtcggaaactgat
gcaaccaatgagatggtagtcgaaccttcccaactttgctgtccaccaatgagagattct
gcccctctatctcccgcccccacgatggactcagctcctaaagtggtgccagccttctcc
tctccccccaccctgtctctacccctgtcttggggggtggggggtcagggagacagagcc
cctctgccccaggcggtggtcaaacctcaggtcctcacccacctcatagagggttttgtc
atccaggagggagctgagcctttccctgtgactgggccagtgaaggagccactagccatg
ggtgttcaacaggctgacaatggaggccctgcagtgttgaagtgtgagtactgtgagagc
ttggctcctgccagccagttcagaggctccaagaggttctgctccaagacctgcgctaag
agatacaatgtgagctgcagtcatcacttccaggtcagtagggggcgagcttctgcacgg
ccgcctggtcctcccgttcccccagacaacatcgtcagacgcaggggtcctcgcaggagt
agctcggagatcgcctgcgctaaaatagccggcagacatttacctgtcaaggagtgtcgt
tctgagtccagtcgctcagaggatgtgtccagttgtgatgaggaggaggaagaagattcc
ccatcactctcccctagctcctccctctcctgccctaggcccgcccactgcgatccccat
ttggacgactcagctcaaggcagcctcccattggatgaggccaacttcctgtctgggagc
cccgcccattggggtgtggaggaggtctgcaggttcatctcttcactgcaaggttgcgag
gagctggcagcccagttcctgtcccaggagattgacggacaggccctgctgctactcaga
gaagaacacctcatctccaccatgaacatcaaactaggacccgccctcaagatctgtgcc
ttcatcaacagcctacgagactga
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