Oncorhynchus mykiss (rainbow trout): 110509394
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Entry
110509394 CDS
T07259
Symbol
tiam1a
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04530
Tight junction
omy04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110509394 (tiam1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
110509394 (tiam1a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PDZ
PH_9
SOS1_NGEF_PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
110509394
NCBI-ProteinID:
XP_036823109
UniProt:
A0A8K9V7W6
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All DBs
Position
Y:43134646..43312061
Genome browser
AA seq
1807 aa
AA seq
DB search
MGNVESQNGDSGFYGNEKGHLSRKHTSRSLRLSTKHQQQNPSRRSLRPSAGKSEHRNSEA
STRSSSTPSIPQSLVENGLEPFNQTDELGEFGINPHWTDRVAMTMRPSESFPHDDDDDDL
TGDPSLATPTPETSEVDTIVLDHEGAEEEGATTYPVEGDDAERETDGEVRYLQRVNEGPR
EEGSCKKKRSKSADMWRDDSQEFSLSDLSQDHLTSTEEIIDGGEEEEGEEEEEEERASSR
GTAGSAERASSLDHLCSERSQPVLRGTHNRYAKNHRDGELTAHRGRDGEGDEGLISPQEE
EGSGYGAFTLPCRRSHCLSEGLSGHQVVPCPTFQGRRAQTTQDISGVLGEGSEYGDSGID
GVATETDGEVGPGSRRRCKAMSASFSVYSAAGSSAFNGSDSGSSSGGGEGGGGRGGEGEG
GGGRGGEGGGRGGGGGGRKGGWGMYENFHQDFENQHWTHRERDCAEEAGSAESDERSSGT
LSTAYPSDALIGCCAQGTVRKAGALAVKNFLVHKKNKKVEPATKRKWKHYWVCLKGCTLF
LYETDGRSGIDHHSVPKHAVWAEYSILQAVPEHPKKDFVFCLSNSLGDAFLFQTSGQTEL
ENWITAIHSACAAAVARQHHREDTVRLLRTEIRKLEQKIDMDEKMKKMGDMQLSAVTDNK
KRKTILEQIFLWEQNLEQFHLDMFRCRCYLASLQGGELPNPKRLLAVASRATKQAMGRLG
IFSVSSFHALVAVRTESAVRKRSQAMPRPSSKRRSRFSSLWGLDTTSKKKVKGRPSINQV
FVAGGEPVSKPTERRFEDTASEKSKEEGSLKMIPQDSVDSEIWVPDYLAPSWVCLPNDQP
VLVVIQPGETAEDTLDAVCKAHKLDPSNFYLRLKVCVEDQLLLYVPKMEEDISDLLYKEI
EICPKTTKLIRFDKAESCTLGYGFSIAVVDEEGTQQLHITEVNAGGLASAKGLHVGDEIL
LLNGKPASALGVVDMRSALVGPSLSLSVSTLPTLDPRDLCPFPPRRSNTAEYDTCTDIYS
QSQEDILDEVSGLTVVSPDDTLEDESVLDLENSGHNQADYTEPGQKSTEQVTAYCRSLHE
MNPSHASPQSSSSCSSSLSPSQAMPVAAGIAIQRQLSHADKLRKVISELVETERTYVKDL
GCLIERYLTPLQKERFLTQDELDVLFGNLGEMLQFQVEFLKTLEDGTRLVANLDRLERVE
QFKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLAKAKTDADFKAFLAERNPKQQHS
STLESYLIKPIQRILKYPLLLRELYSLTDPDSEEHYHLNVAMKAMNKVASHINEMQKLHE
EYGAVFDQLINETTADRKEVSDLSMGDLLLHSTLVWINPPASLVKGKKDPELATFVFKTA
VVFVYRDRSKQRKKLGTSHRPAVSDDRVPFLFRHMISTDSLQVRALTNSEGTAVCEIVHM
RSESEGRPERTFHLCCSSVDSKKDFLKTVHSILRDKQRRQLMKTESLPLNQQYVPFGGKR
LCNLKGNRPAMNRAVSAPSRTLGRRKLVRNRFTIDTDLVLHDNHEDSNPTHSTHDHSHQP
PHSHQPPHSHQHPHSHQHPHSHQHPHSHQHPHSHQPPHSHQPPHSHNPLLPTQTPQQQTL
LATGGDTDRWVEEQFDLGCYDDQGGVTGERRMEGGMEVKETDILSDDDEYCKSVRASSTE
PSLLEERMEGATLEERNQDQDRGVDEEEREEGGKKEEEEERRSSQGILQEDEWGERGESQ
VDSVSPAPPPSRSPAPPVKLTPLRKQWAAEGVAGKQCSVEGVAKRDHCDVIWVRREDYAN
GGNNDVF
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggggaatgtggaaagtcagaatggtgacagcggtttctacggaaacgagaaaggtcac
ctgtcccgaaagcacacgtcccgatccctccgcctctccaccaagcatcagcagcagaat
cccagtcgacgctccctccgaccctcggcaggaaagtcggaacatcggaattccgaagcc
agcacccgctcttccagcacgcccagtatcccacaatccttagtggagaacggcctggaa
ccttttaaccagacagacgagctgggggagtttggaatcaaccctcattggactgaccgc
gtcgccatgacgatgaggccttccgagtccttcccgcacgacgacgacgacgacgacctc
accggtgacccctctttagccacgcccactccggaaacctccgaggtggacacgatcgtt
ctggaccacgaaggagctgaggaagaaggagcgacgacgtacccggtagaaggggacgac
gcggagagagagacagacggagaggtgcggtacctccagagggtgaacgagggaccgagg
gaagaaggaagttgtaagaagaagaggtctaaatcagcggacatgtggagagacgacagt
caggagttctctctgtcagatctcagccaggaccacctcacctccactgaagagattata
gatggaggagaggaagaggagggggaagaggaagaggaggaagagagagccagttccaga
ggaacagcaggttctgcagagagagcctcatcactagaccacctgtgtagcgagcgcagc
cagccggttctgcgaggaacacataaccgctatgccaagaaccaccgggacggggaactc
accgcccacagaggaagggatggagagggggatgaagggctgatctcgccccaggaggag
gagggaagcgggtacggggcgtttacgctgccctgtcggaggtcccactgtctgtctgaa
ggtctgtcaggacaccaggtggtaccgtgtccgaccttccagggtcgaagggcacagacg
acacaggacatatcgggcgtgctgggagagggcagtgagtacggcgatagcggcatcgac
ggggttgccacggagacggacggggaagtggggcctgggtctcggaggcgttgtaaggcc
atgtcggcctcgttctccgtctactctgctgccgggagcagcgcgtttaacgggagtgac
agcgggagcagcagtggaggaggagagggaggaggaggaagaggaggagagggagaagga
ggaggaggaagaggaggagagggaggaggaagaggaggaggaggaggggggagaaaagga
ggatggggaatgtatgagaactttcatcaggactttgagaatcaacactggactcatcga
gagcgtgactgcgcggaggaggcgggctcagctgagagtgacgagcgtagcagcggcaca
ctaagcacggcttacccatcagacgctctcattggctgctgtgcgcagggcacggtgagg
aaggcgggagctctggcagtgaagaacttcctggttcacaagaagaacaagaaggtggag
ccagccaccaagaggaagtggaaacattactgggtttgtctcaaaggatgcactctgttc
ctgtacgagactgacgggcggtcggggattgaccatcatagcgttcctaaacacgcggtg
tgggctgagtacagtatccttcaggccgtacctgaacaccccaagaaggactttgtcttc
tgcctcagcaactctctaggggatgcatttctcttccagacgtcgggccagacggaactg
gagaattggatcacggcgatccactcggcgtgcgcggctgccgttgctaggcaacatcac
cgggaggatacggtgcgattgctaaggacagagatcaggaaactggagcagaagatagac
atggacgagaagatgaagaagatgggagatatgcagctgtctgcagtgacagataacaag
aagagaaagactattctggaacagatcttcctgtgggagcagaatctagagcagttccac
ttggatatgttcaggtgtcgttgttacctggccagtctgcagggaggggagctgcccaac
cctaaacgcctgctagccgtggcctccagagccaccaaacaggccatgggacgcctggga
atcttctcggtgtcttcctttcatgcactggtggcggtgcgaacagagagcgcggtgagg
aagcggtcccaggctatgccccgcccctctagtaaacggcggagtcgcttctcttccctc
tgggggctggacaccacatctaagaagaaggttaaaggtcgacccagcatcaaccaggtg
tttgttgctgggggggaaccagtgagcaaaccaacggagagaaggtttgaagatacggcc
agtgagaaatcgaaggaggagggttcattgaaaatgattccccaggacagcgtggacagt
gagatttgggttcctgactacctagccccatcctgggtgtgtctacctaacgaccagcct
gtgcttgtcgtcattcaaccaggggagactgcagaagataccctggacgctgtctgcaag
gctcataaactggacccgtctaacttctacctgcgtctgaaggtgtgtgtagaggatcag
ctgctgctatatgttcccaaaatggaagaagacatctctgatctgctctacaaagagatt
gaaatatgtcccaaaaccaccaagctgatccgcttcgacaaagctgagtcctgcacgctg
ggatacggtttctccatagcagtagtggacgaggaggggactcagcagctccatatcact
gaagtgaatgcaggaggactggcttctgctaaaggcctgcatgtgggtgatgagatcctg
ttgttaaatggtaaaccggcgtcggctctgggcgtggtggatatgaggtcagcgttagtc
ggcccctcgttgtccctgagcgtgagcaccctgccgacccttgacccccgcgacctctgc
ccttttccccctcgacgctccaacacagcagaatacgacacttgtacagacatctattcc
cagagccaagaggacattctggatgaggtatcagggttgacggtggtcagtccagatgat
actttagaggatgagtcagttctggatctggagaattcaggacacaaccaggcggactac
actgagccaggacagaagagtactgagcaggtgactgcatactgccggagtctccatgag
atgaatccttcccatgcttcccctcagtcttcctcgtcctgttcttcctccctctctccc
agtcaagcgatgccagtggcggcgggcattgccatccagagacagttgtcacacgccgac
aaactacgtaaagtcatcagtgaactggtggagactgagaggacctatgtcaaggacctg
ggctgtctgatagagcgttacctaactcctctacagaaggaaagattcctcacccaggat
gagctcgatgtcctgttcggtaacctaggagagatgctgcagttccaggttgagttcctg
aagactctagaagatgggaccagactggtagccaacctggacaggctggagagagtagaa
cagtttaagaaagtgctgttctctctgggtggatcgttcctgtactacgccgaccgcttt
aagatctacagcgctttctgtgccagccacaccaaggtccccaaggtcctggccaaagct
aagacagatgcagacttcaaggcgttcctggcagagaggaacccgaaacaacaacactcc
tcaaccctggagtcctacctgatcaaacccatccagaggatcctgaagtacccgctacta
ctgagagagctgtactcactgacggaccctgacagtgaggaacactatcacctgaatgtt
gcgatgaaggccatgaacaaggtggccagtcacatcaatgagatgcagaaacttcatgag
gaatacggagccgtgtttgaccagctcatcaacgagacgaccgccgaccggaaggaggta
tccgatctatccatgggagatcttctcctccactccaccctggtgtggatcaatcctcca
gcctccctggtcaagggcaaaaaggaccctgagctggctaccttcgtgttcaagactgcg
gtggtctttgtgtacagagatcgctccaagcagaggaagaagcttggcacgtctcatcgt
cctgctgtgtccgatgacagagtcccgttccttttccgtcacatgatttcaacagactcc
ctacaagtccgcgccctcacaaactccgagggtacggcggtgtgtgagatagttcacatg
aggtcagagtctgaggggagaccagagagaacctttcacctgtgctgcagttctgtggac
agtaagaaggacttcctgaagacagtccactccatcctgagagataaacagcgacgtcag
ctgatgaagactgagtctctacccctcaaccagcagtatgtccccttcggaggaaaacgc
ctctgcaacctcaagggaaacagaccggccatgaacagagcagtctcagccccgtctcgg
acccttggtcgcaggaagctggttaggaaccgattcaccattgacaccgacctcgttctc
catgacaaccacgaagactctaaccccacccactctacccatgaccattcccaccagcct
ccacattcccaccagcctccacattcccaccagcatccacattcccaccagcatccacat
tcccaccagcatccacattcccaccagcatccacattcgcaccagcctccacattcgcac
cagcctccacattcccataaccccctgcttcctacccagacgcctcagcagcaaacgctg
ttggcgactggaggcgacacggaccgctgggtggaagaacagttcgacctgggttgctac
gacgaccagggaggagtgacgggggagaggaggatggagggagggatggaggtgaaagag
acggacattctgagcgacgacgacgagtactgcaagtcagtcagggcttcatcaaccgaa
cccagcctcctggaagagaggatggagggagcgactctagaagaaaggaaccaagaccag
gacagaggggtagacgaggaggagagggaggaggggggaaagaaagaggaggaggaagag
aggaggagctcccagggcattctccaagaggacgagtggggtgaaaggggagagtcacag
gtagactctgtctcccccgcccctcccccctcacggtcccccgcacccccggtgaagctt
acccccctcaggaagcaatgggctgcagagggcgtggccgggaagcagtgttccgtggag
ggagtggccaagagggaccactgtgatgtcatctgggtgcgacgcgaagactacgccaac
ggagggaacaacgacgtcttctga
DBGET
integrated database retrieval system
