Oncorhynchus mykiss (rainbow trout): 110512638
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Entry
110512638 CDS
T07259
Name
(RefSeq) poliovirus receptor isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03266
Virion - Herpesvirus
omy04514
Cell adhesion molecule (CAM) interaction
omy04517
IgSF CAM signaling
omy04520
Adherens junction
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
110512638
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110512638
04517 IgSF CAM signaling
110512638
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110512638
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110512638
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110512638
04090 CD molecules [BR:
omy04090
]
110512638
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
Nectin family
110512638
CD molecules [BR:
omy04090
]
Proteins
110512638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
ig
V-set
Ig_3
I-set
Ig_2
Ig_PVRIG
TM_ErbB1
DUF6338
DUF4342
Syndecan
Motif
Other DBs
NCBI-GeneID:
110512638
NCBI-ProteinID:
XP_036827290
LinkDB
All DBs
Position
3:19930076..20016410
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AA seq
539 aa
AA seq
DB search
MAREDARHWHDFTKMIGLFSVVTLLTFQGAVSQRVKVEPEVMSYPSQAVNLRCAFTDAGG
IQLTQVSWIYEPKEGERLNIAVYHPNFGASYPTSPLKGRVRFTTEPPSLANPSIQISDVK
MTDEGKYICEYATYPSGNEQGVTSLVMLAKPRNSASGVTVIASTVAMGAQPVVVARCESA
DGRPAAQIAWVTAVNGNATSASTAGADNTVTVSSQYMLVPTAADNGKDISCLVSHRTQAK
PESFLMNLAIEYPPQVTIVGYDNNWYVGRTNVALTCQATANPVPTTIAWKTMSGQMPDTV
QVKENVLTVLKVDEQINTTFVCEVKNRLGTGKDQVTVMVREPSVVPSNAAVVAGAVIGSL
LALLLVAALIAVLVTRSRRQQQGYRGNPNHSSFDIKSRLFGAGKKGSKNGTGAGAGGNGV
GGNNNSPIYVYKEGSAHDGLTDKANQHVPLHLGGHGEGGVATAPTAQDILLSGELDEAER
RKFDQLEDDEESYDHFGGGGPILQLRPPHDQDGIMSGYLDDDMESQRDGSVISRTAVYV
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagaagacgctcgacattggcatgacttcacaaaaatgatcggactgttcagc
gtggtcacgttgctgacttttcaaggggcggtgtctcagcgggtgaaggtggaaccggaa
gtgatgtcctaccccagccaggcggtcaacctgaggtgtgccttcacagacgctggaggg
atacagctcacacaggtgtcctggatctatgagccgaaggagggcgagcggctcaacatc
gccgtgtaccaccctaactttggggcaagttaccccacatcgcccctgaaggggcgggtc
cgcttcacgacggagccaccctccctcgccaacccctccatccagatctcagacgtcaag
atgactgacgaggggaaatacatctgtgaatacgccacctaccccagcggcaacgaacag
ggtgtcacctccctcgtcatgctagccaaacccaggaactctgcctccggggtaacagtg
atagcctccactgtcgccatgggagcccagccagttgtcgtggcccgctgtgagtcggcc
gacggtcgccctgctgcccagatcgcatgggtgacagctgtcaacggcaacgctacctcc
gcctctacggcgggtgctgacaacaccgtgacggtatccagccagtacatgctggttccc
acagcagcagacaacggcaaagacatcagctgtttggtgtcccatcgaacccaggccaag
cctgagagcttcctgatgaacctggccatcgaataccccccacaggtgaccatcgtgggc
tatgataataactggtacgtgggtcggaccaacgtggctctgacctgtcaggctactgcc
aaccccgtccctaccaccatcgcatggaaaactatgtccggtcagatgccagacacagtg
caggtaaaagaaaacgtgctgaccgtgctgaaggtggacgagcagatcaacacaaccttc
gtctgtgaggtcaagaaccgcctgggcaccggcaaggaccaggtcactgttatggtcaga
gaaccctctgtggtcccctccaacgcggccgtggtggcaggtgctgtgattggctccctt
ctggccctcctcctcgtcgccgcccttatcgccgtcctggtcacccggagccgccggcaa
cagcagggttaccgtggcaacccaaaccacagctccttcgacataaagtcgcgtctcttc
ggcgccggcaagaaggggagcaagaacgggacaggtgctggcgccgggggcaacggggtg
ggcggcaacaacaacagccccatctatgtctacaaggagggctccgcccatgatggcctg
actgacaaggccaatcaacatgtgccgctgcacctgggggggcatggtgaggggggggtt
gccacggcgcccactgcgcaggacatcctgctgagcggcgagctggacgaggcagagcga
aggaagtttgaccagctggaggacgacgaggagagttacgaccactttggagggggcggg
cccatcctgcaactccgcccaccacatgaccaggacggaatcatgagcggttaccttgac
gacgacatggagtctcagcgcgacgggtcggtcatctcacggactgccgtgtacgtgtag
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