Oncorhynchus mykiss (rainbow trout): 110513416
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Entry
110513416 CDS
T07259
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00514
Other types of O-glycan biosynthesis
omy04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
110513416
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110513416
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
omy01003
]
110513416
Enzymes [BR:
omy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
110513416
Glycosyltransferases [BR:
omy01003
]
Glycan extension
O-Glycan
110513416
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Glyco_tranf_2_4
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
110513416
NCBI-ProteinID:
XP_036804376
UniProt:
A0A8K9URA0
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Position
17:493232..519147
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AA seq
387 aa
AA seq
DB search
MSKGVWRKRALSTAGGASFTCLVMMFLLVAVIKHRGTLVEEGSTGREFGTRSLQSLKSMN
NNDKPVNQAPAEDRVGEKCQATQVKGFSAYFSELSRGKRAMEHRAVKTRDPTPVEELSPA
DVFIAVKTTKKYHHTRLDLLLDTWISRNMLQTYVFTDGEDDRLRKRMGSHMINTNCSAAH
SRQALSCKMAVEYDTFISSGKKWFCHVDDDNYVNIRPLVKLLSHYSHAHDVYIGRPSLDR
PLEATERFGDAHTRPVRFWFATGGAGFCVSRGLALKMSPWASGGNFMTTADRIHLPDDCT
VGYIIEALLGVGLIRSPLFHSHLENLQLVSPTQIHHQVTLSYGTVDSKRNIINIRGALSL
DEDPTRFRSVHCVLYPDTPWCSALTWY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaggtgtctggaggaaacgcgccctctccacggctggaggagcctcgttcacc
tgcctcgtgatgatgtttcttctcgtcgccgttatcaaacaccgggggactctcgtggag
gaaggttccaccgggagagagttcgggactcgctccctgcaaagtttaaagagcatgaat
aataatgacaaacccgttaaccaagctccagccgaggatcgggtcggggagaaatgtcag
gcgacccaggtcaagggtttctcggcgtacttcagtgagttgagccgtgggaagcgggcg
atggagcacagagcggtgaagactcgtgatcctacaccggtggaggagctcagtccggcg
gatgtgttcatagcggtgaaaaccaccaagaaatatcaccacaccaggctggatctactg
ctggacacatggatctctagaaacatgctacagacgtacgtattcaccgatggagaggat
gacaggctgaggaagaggatggggagtcacatgatcaatacgaactgttcagcggcccac
agtcgccaggctctgtcctgtaaaatggccgtcgaatacgacaccttcatcagctctgga
aagaaatggttctgccatgtggatgatgataactacgtgaacatacgtcccctcgtgaag
ctcctgtctcactacagccacgcccacgacgtctacattggccggcctagcctcgaccga
ccgctagaagccaccgagaggtttggcgacgcccacacgcgtccagtgcgtttctggttt
gccacaggaggagcagggttctgtgttagtcgaggtctcgccctcaagatgagcccctgg
gccagtggaggtaatttcatgacaacagctgatcgtattcatctccctgacgactgtacg
gttggttacatcatcgaggcgttgctaggggtgggtcttatccgctccccactgttccac
tctcatctggagaaccttcagctggtgtcaccgacacagatacaccaccaggtgactctg
agttatggaacggttgacagtaagagaaacataatcaatataagaggagcgctctcattg
gacgaagaccctaccaggttcaggtctgtccattgtgtcttatacccagacactccgtgg
tgttcagccctgacctggtactga
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