Oncorhynchus mykiss (rainbow trout): 110516784
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Entry
110516784 CDS
T07259
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110516784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110516784
Membrane trafficking [BR:
omy04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
110516784
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
110516784
NCBI-ProteinID:
XP_036828232
UniProt:
A0A8K9V8U6
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MIGAPDVVAFTKEDDFGEVGYPNPWVVPEEFSVPLFPSNNNANPWAKTSYAKFTKDFILI
SEFSEQVGPQPLLTIPDDPKVFGTFDLNYFSLRIMSVDYQASFVGHPTGSGYPRLSFVED
SRVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLLFSRAS
ECLKTGNRRAFARELQRKLRDLEYTRSVLQKEEGLQREAGPQGCYSARAVDKANELAAME
KSIYEHRDLLRQITSYPLRPRRDPHAAHCQHCVTESQRHRDAPPGPDRDTGEEAGQRRQS
YTPQLIKGKSAKCFAKRLKNLTELCEERFYEATVELLNHTERCFRGDLCYLYTRRLDRAL
RRKQNITNFLFEEELGEEEEEVAVLGRIFCSLNHTVGTDSHIHTPSIVLCPEPPESLEGL
EVNPPCPDNSAQQSEALTGEERLESSLSDLTMETQDQESSEENKDSFSSDRSGGEEEEEG
REGGDQTPVFLLEAEEGGEGETHRVCEREGEAEGVFNRKREGEAEGVVNRKREGEAEGVF
NGEREGEAEGVFNGEREGEAEGVFNGKTEGEAGVLGREEGGAETEEGGAETEEGGAETEE
GGAETEEGDGQRVPDPELLVQMDTACCMSQEGFLYNSSPPDMLPASGLQPGSLPLPLVVN
QEPQALLPVQGDYGLGSPHCPSPGAGLDLPVSSSGDTTSRGSDQDGWDCTMSASTGSERA
GSPLGYGGLVTLRQKKRAGQGALRFVRQYPFALHALWSLLSGRTLVVLGSEEGRVRRLVS
ALALYVPGPGRCGERVQPWLSCPFSLTDLQRWKLIGLQRMASPVGTSMLCSLSRYSRYIS
VLDADRKTLRCPGYRGTLLANVADHRTRLRRGSTYFLHLQNVLSRLASRAFLLSFTHHLH
LPISHLEQRQEVEERTRGFLRDQLRLGEDDCSILMYLSQLITQHYLDSTSGGAVTTQPHL
EKDNTPGTNQQDLDSTSGGAVTTQPHLEKDNTPGTTQQDLEANNILDPATGGAVNQQDPE
SNTGGRVNTGQYLDPTTGGAITPETGVETTTGGAITPETGVEPTTGGAITPETGVEPTTG
GAITPEQYLDPTTGGAITPEQYLDPIINQSATMSRAPPSFTFNYTTSLLYKI
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgattggtgccccagacgtggtggcgtttactaaggaggatgattttggggaggtaggg
taccccaacccctgggtggtgccagaagagttctctgtccctctgttcccatcgaataac
aacgccaacccctgggccaagacgtcatacgccaagttcactaaggacttcatcctcata
tcagagttctctgagcaggtgggcccccagcctcttctcaccattcctgacgacccaaag
gtgtttgggacctttgacctgaactacttcagtctgaggatcatgtctgttgactaccag
gcctcgttcgtaggacaccccaccggcagcggatacccacgactcagttttgtggaggac
tcccgggtggtgctgggtgactctaaggagggggcgtttgcctacgttcaccacctgacg
ctctatgacctggaggcccgaggctttgtccgcccgttctgcatggcctacgtctctgcc
gacgagaggaagatcatgctgcagttccaggagctgtcgctcctcttctcccgcgcctcc
gagtgcctgaagaccggaaaccgacgggccttcgcccgcgagctgcagaggaagctacgt
gacctggagtacacacggtctgttctgcagaaagaggaggggcttcagcgggaggcgggg
cctcaggggtgttactccgcccgcgcggtggacaaggccaatgagcttgcggcgatggag
aagagtatctacgagcaccgagacctgctgaggcagatcacctcgtaccccctccgcccc
cgccgagacccccacgccgcacactgtcaacactgtgtcacagagtcacagagacacaga
gacgcgccgcctggccccgaccgtgacacgggggaggaggcgggacagaggaggcagtcc
tacaccccgcagctgatcaaggggaagtcggccaagtgtttcgccaagcgtctgaagaac
ctgacggagttatgcgaggagaggttctacgaggccaccgtggaactactcaaccacaca
gagcggtgtttccggggggacttgtgttacctgtacacccgccgcctggaccgagcgcta
cgcaggaagcagaacatcaccaacttcctgtttgaggaggagctaggggaggaggaagag
gaagtagcggtgctgggaagaatcttctgttctctcaaccacacagtggggacggactca
catatacacaccccttccatcgtgctttgccccgagccaccggagtctctggagggtctg
gaggtgaaccctccctgccctgataactctgcccagcagagtgaggccctgaccggggag
gagaggctggagtcgtcactctctgatctgaccatggagacgcaggaccaggaaagctct
gaggagaataaggacagctttagtagtgacaggagtggaggagaggaggaggaggaggga
cgggagggaggagatcagacccctgtttttctgctggaggctgaggaggggggagagggt
gagacacaccgtgtgtgtgagagggagggagaggcagaaggagtgtttaacagaaagagg
gagggagaggcagaaggagtggttaacagaaagagggagggagaggcagaaggagtgttt
aatggagagagggagggagaggcagaaggagtgtttaatggagagagggagggagaggca
gaaggagtgtttaacggaaagacggagggagaggcaggagtgcttgggagagaggaggga
ggggctgagacagaggagggaggggctgagacagaggagggaggggctgagacagaggag
ggaggggctgagacagaggagggtgatggacagagagttcctgaccctgagttactggtc
cagatggacacggcctgctgcatgtctcaggagggcttcctgtacaactcttctccccca
gacatgctgcctgcttctgggctgcagcccggctctctaccccttcccctggtggtcaac
caggagccccaggccctgctgccggtccagggggactacggcctgggttccccccactgc
ccgagccctggggctgggctggacctgcccgtctcctcctcgggagataccacctccagg
ggttcggaccaggacgggtgggactgtaccatgtcagcgtctacggggtccgaacgggcc
ggctcacctctggggtacggggggttggtaacgctgaggcagaagaagagggccgggcag
ggagcgctcaggtttgtgcgtcagtatccgtttgccctgcatgccctgtggtccctactt
agtggtcgaaccctggtggtcctgggatctgaggaggggagggtcaggaggctggtgtcc
gctctagccctctacgtgcctggacccgggcgctgtggggagagggtccagccctggttg
tcctgccccttcagcctcactgacctacagcgatggaaactcataggactgcagaggatg
gcgtctcccgtggggaccagcatgctctgctctctgtctcgctacagccgttacatctcc
gtcctggacgccgaccggaagaccctccgttgccccggctaccgcggaaccctcctggcc
aacgtggcggaccaccgtacccgtctgcgccgaggttccacctacttccttcatctccag
aacgtgctcagtagactggcttcccgggccttcctccttagctttacgcatcacctccac
cttcccatcagccacctggagcagagacaggaagtggaggagaggacgagaggcttcctg
agggatcagctcaggcttggggaagacgactgttccatcctgatgtacctgagtcagctg
atcacacagcactacctggacagtacctcaggaggagctgttactacacaaccccacctg
gagaaggacaacacgcctggaaccaaccagcaggacctggacagtacctcaggaggcgct
gttactacacaaccccacctggagaaggacaacacgcctggaaccacacagcaggacctg
gaagctaacaacatactagaccctgccacagggggtgctgtaaaccaacaagaccctgag
tctaatactggaggcagagtgaatacagggcagtacctagaccctaccactgggggcgct
ataaccccagagacgggcgtagagactaccactgggggcgctataaccccagagacgggc
gtagagcctaccactgggggcgcaataaccccagagacgggcgtagagcctacaactggg
ggcgctataaccccagagcagtacctagaccctaccactgggggcgctataaccccagag
cagtacctagaccctatcatcaatcagtctgctactatgagcagagctccacccagcttc
acctttaactacaccaccagtctcctatacaagatctga
DBGET
integrated database retrieval system
