KEGG   Oncorhynchus mykiss (rainbow trout): 110516895
Entry
110516895         CDS       T07259                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-Q alpha chain-like
  KO
K06752  MHC class II antigen
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145  Phagosome
omy04514  Cell adhesion molecule (CAM) interaction
omy04672  Intestinal immune network for IgA production
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    110516895
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110516895
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    110516895
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110516895
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110516895
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110516895
  Exosomal proteins of epithelial cells
   110516895
  Exosomal proteins of breast milk
   110516895
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 C2-set_2 C2-set_3 I-set
Other DBs
NCBI-GeneID: 110516895
NCBI-ProteinID: XP_036818031
UniProt: A0A8C7VBI6
LinkDB
Position
2:complement(14404395..14406810)
AA seq 244 aa
MNLSVAIVVLTAVVCTSAEIPHETVYVQGCLENTKVEAEAELQVDGEEVVYADFQSGREV
WTLPEFLGPFPSSTVRNFYKNAVKGRRLCQDALALWILEEKCPPEVKDAPESTIYPRAEE
VLGVENTLICFANHFYPPPVKVNWTKNGLEVTEGASLSRYYPNKDGTFHQFSSLSFTPQE
GDVYACTVEHTALEDPKTRFWEYKIHEVSGSSAGPAVFCGVGLTLGLLGVATGTFLYVKG
QQFN
NT seq 735 nt   +upstreamnt  +downstreamnt
atgaacctctctgtggctattgtcgttcttactgcggtcgtctgcacttcggcagaaatt
cctcatgagaccgtctatgtgcagggctgtcttgagaatacaaaggtggaggcggaggca
gagcttcaggtggatggggaggaagtggtatatgctgacttccagagtggacgggaagtt
tggacattgcctgagttcctggggccattcccaagctccactgttcgtaacttctacaag
aatgccgttaaaggcagacgattgtgtcaggatgccttggctctttggatattagaagaa
aagtgtccacctgaggtaaaagatgcccctgagagcaccatctaccccagggctgaggag
gtgctgggggtggagaacacccttatctgctttgccaatcatttctaccccccgcctgtc
aaagtcaactggaccaagaatggcctggaggtgactgagggagcgtctctcagtcggtac
tatcctaataaagatggaacgttccaccagttctccagcctgagtttcactccacaggag
ggggatgtctatgcctgcactgtggagcacacagccttggaggaccccaaaaccaggttc
tgggagtataagatacatgaggtgagtgggtccagtgctggtcctgctgtattctgtgga
gtgggcctgactctgggactgttgggagtggctaccggaacattcctgtacgtcaaagga
caacagtttaactga

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