Oncorhynchus mykiss (rainbow trout): 110520113
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Entry
110520113 CDS
T07259
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04081
Hormone signaling
omy04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
110520113
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
110520113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110520113
Membrane trafficking [BR:
omy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
110520113
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
Vit_b-sht_shell
Motif
Other DBs
NCBI-GeneID:
110520113
NCBI-ProteinID:
XP_036830320
Ensembl:
ENSOMYG00000021112
LinkDB
All DBs
Position
3:49629246..49676777
Genome browser
AA seq
872 aa
AA seq
DB search
MAGLLAPSYGVMESGGPSPDRMPDKENISNNSFGSISKHLSKVPSEKIMRAGKVLRDAIL
SRAPHIIRDRMYHLKTYRWVGICTPGTLISQQCCVGTELVDWQMQQSSCVHSRIQAVGMW
QVLLEEGVLNHVDQELTFQDKYLFYRFLDDEQDDAPLPTEKEARESDEELQETLLLLSQI
GPDAHMRMILRKQPGQRTADDLEIMYEELLHIKALSHLSTTVKKELAGVLIFESHAKAGT
VLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDN
CHFLRVDKEDFNRILKDVEANTVRLKEHYQDVLVLEKSPSSQASTHGSTTTTATSSHYKY
TVMSGTPEKILEHFLEMMRLDSHLNESDPALDDFLLMHCVFIPNSQLCPVLMAHYHAEAS
QGSEQERLDYTLNNKRKVIRLVLQWASVHGDHLQEEDASLAFLEEFFVSVSDDARVIPAL
KDQLPELEKIVKNNSDDARSSQQKHKILLRQFSMGDEKLQKRQAIKSNDEILFKVYCSDH
TYTTIRVPMAASVREVISAVADKLGSAEDLLLVNLSSAGDKVVLKPNDISVFSTLSINGR
LFVCPGDQLDSLMPLPEQEGPSTGSLGSFELMSSKDLAYQMTLYDWELFHCVHEHELIYY
TFGRKNFKKTTANMDLFLRRFNEIQLWVITEICLCAQLSKRVQLLKKFIKIAAHCKEYKN
LNSFFAIIMGMSNPAVSRLSQTWEKLPSKFKKFYSEFESLMDPSRNHRAYRLTVAKLDPP
IIPFMPLLIKDMTFTHDGNKTFIDSLVNFEKMRMIANTVRIVRYCRSLPFSAEPSQTSKN
HLDVRSYVRQLTVIDNQRTLSQFSHRLEPRRT
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggctggactgctagccccatcttatggagttatggaaagtggtggacccagccctgac
agaatgccagacaaagagaacataagcaacaactcttttggatccatctctaaacatctg
agtaaggtcccatctgagaagatcatgcgagcagggaaggttctacgtgatgccatcctc
tccagagctccccacatcatccgagacaggatgtaccacctgaagacatacaggtgggtt
ggaatatgtacacctggtacactcatatcacagcaatgctgtgtgggaacagagctggtt
gactggcagatgcagcagagctcctgtgttcactctcgcattcaagcagtgggcatgtgg
caggtgctgctggaggaaggagttctcaaccacgtggaccaggagctgaccttccaggac
aagtatctgttctaccgtttcttggatgatgagcaggatgacgctcccctgcccactgag
aaggaggccagggagagcgatgaggagctgcaggagaccctcctcctcctctcccaaata
ggccctgacgcacacatgcgcatgatcctgaggaaacagccaggacagaggacagcagat
gatttggagataatgtatgaggagctgctccatataaaagccttatcgcacctatccacc
actgtaaagaaggagttagccggagtcctgatctttgagtcccatgccaaagcaggaacc
gtgttgttcaatcaaggggaggaaggcacatcgtggtacatcattctaaagggctctgta
aacgttgtcatttatggaaagggggttgtttgcacgctacatgagggagatgactttggg
aagcttgccctggtcaacgatgccccccgcgccgcctccattgtcctacgagaggataac
tgccacttcctacgtgtggacaaggaggacttcaatcggatcctcaaagatgtggaggcc
aacacggtgcgtttgaaagagcattatcaggatgttctggtcctggagaagagccccagc
agccaggcctccacccatggctccaccaccaccacagccacctcctcacactataaatac
actgtgatgtccgggacaccggagaagattctggagcactttctggaaatgatgcgactg
gactctcaccttaacgaatcagatccagctctggacgactttctgctcatgcactgcgtc
ttcatccctaacagtcagctgtgtccggtgctcatggcccactaccatgctgaggcgtcc
cagggctcagaacaggagcgtcttgactataccctgaacaacaagcggaaggtgatcagg
ctggtgctgcagtgggcctcagtacatggagaccacctgcaggaggaggatgcctccctc
gccttcctagaggagttctttgtgtctgtatctgatgatgccagggtgattcctgctctg
aaagatcaactcccagagttagagaagatcgttaaaaacaactctgatgacgccagatcc
tctcaacaaaagcacaaaatcctgttgaggcagttcagcatgggggatgagaagctgcag
aaacgacaggccatcaagagtaatgatgagatcctgttcaaagtgtactgcagcgaccac
acctacaccaccatccgggtccccatggccgcctcggtcagagaggtcatcagcgcagtg
gccgacaagctggggtcagcggaggaccttctcctggtcaacctcagttcggccggagat
aaagtggtgctaaaacccaacgatatttccgtcttctccacactcagcatcaacggccgt
ctatttgtctgtcccggggatcaactggattcattgatgcccttaccagagcaggaagga
ccctccacaggctccctgggcagctttgagttgatgagctctaaagacctggcctaccag
atgactctctacgactgggaactcttccactgtgtacacgagcatgagctgatctactat
acatttgggaggaagaacttcaagaagactacggccaacatggacctgttcctcaggagg
ttcaatgagattcagctgtgggtgatcacggagatctgtctgtgtgctcagctcagcaag
cgtgttcagctgctcaagaagttcatcaagatcgctgcccactgtaaggagtataagaac
ctcaactccttcttcgctattatcatgggcatgagtaacccagccgtgagcagactgagt
cagacatgggagaaactacccagcaaatttaagaagttttatagcgaatttgaaagctta
atggacccgtccaggaaccaccgggcgtaccggctcactgtggccaagctggacccgccc
atcattcccttcatgccgctgctgatcaaagacatgactttcactcatgatggaaacaag
acgttcattgacagtttggtcaattttgagaaaatgcgaatgatcgctaacacagtgaga
atagtgagatactgcagaagtctgccattcagtgccgaaccatctcagaccagtaagaac
cacctggacgtgaggagctatgtgcgccagctgactgtgattgacaaccagagaacacta
tctcagttctcccacagactggaaccacgcaggacctga
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