Oncorhynchus mykiss (rainbow trout): 110520285
Help
Entry
110520285 CDS
T07259
Name
(RefSeq) zinc finger protein GLI2
KO
K16798
zinc finger protein GLI2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110520285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110520285
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
110520285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
110520285
NCBI-ProteinID:
XP_021453150
Ensembl:
ENSOMYG00000015035
UniProt:
A0A8C7VKH3
LinkDB
All DBs
Position
3:complement(57632140..57734917)
Genome browser
AA seq
1521 aa
AA seq
DB search
METSAPTATEKKEHKGSGLDGSSFSDLPKKPSPTTVTRGPHHLFPTFHTPIPIDMRHHEG
RYHYEPHPLHAMHGHHGLAGSPVISDGISLIRLSPHAAGTGDSPFSPPHSYVHPQMEHYL
RSMHSSPTLSMISAARGLSPAEVTHEHLKEHGLFSLPPPPPGANPTDYYHLMASGRSTYG
DLIMQTGAAAAAAAAAAHLPDYISPVDVSRFSSPRLTPRLNRKRALSISPLSDASIDLQT
MIRTSPNSLVAYINNSRSSSAASSSYGHLSVSGISPSFTFPHPINPMAYQQLLNQQRGLS
AFGHTPPLIQPSPSFAARQHAHALAASTLNTTHNTSSSESNQNAGGDPAVSSTVNPMITK
RHKVKTEAEGPRPISPCFQEHVLDLSEELDKDECKQEPEAVYETNCHWIGCSKEYDTQDQ
LVHHINNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKA
YSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTK
RYTDPSSLRKHVKTVHGPEAHVTKKQRGDVPPRGPPKGNGENEANAKQSRRGMDGKMEAN
STIRGAEDCLQVKSIKTENSITYQSSPGGHSSCSSEPSPLGSAHNNDSGVEMALHSGGSF
GDLSALDDPPMVDSSTLSPRNSVGVGLGLHKGGGVTIKLENIKKERLKNVRDSCPWANSG
PQAPQVRNTKLPPIPAVGSLLENSNMIAPPGLYPGQRLGDLSSCEVTMLNQLNEQGRRDS
NTSTASSAYISRRSSGISPCYSSRRSSEASQFSNRHNNISSADSYDPISTDLSRRSSEAS
QCGGGGGNLSSLLSLTPAQHYHLKAKYAAATGGAPPTPLPNMERMSLRTRMALYGDHSQE
RESLSHSQLFHPPTAAVPRRCSDIGYGSHSMMPHEVPGNLPRRASDPVRRPTLDPLSLPR
VQRYNSMNSMNPNSMMPPPSADRRGLAMQSYTRSDGSLHHHPFAPRPPSISENVVMETMA
VDGLDHAGDEDMVLPDDVVQYLRSQNTGPGQSAGPANYANSQSQGGFQVQGNMTSSQQQF
YGQRRMAMVDANMPLSGSSQVPLPPYQMSPGSGSQQQQYPASHSRNNKNNMPVQWNEVSS
GTVDATATSRLTKQNLLRNNNLAMVQQRQNFGHFQGRMGSNSNQQVMPMSQNMALQGYTQ
RSNSQWINSVQQQQRQPCSMNYPEQMSPQQGYGQEIIPVPNSGSGNGSFRPNFNGMALPN
GRVMATHNNPDTQIYRSRTPVESYAPHMIQVDQQNYSISSQQQDVNTGNRAGMQPRPPME
PKSMSSRQHSGSRGMMQQNRFPQSDLHHNTSEASPKRPGSTAAHTGGHNRDSNSNASMFY
AGQIQMFEPNNNHNVSFNSPMSPVMGQTPGGTTVTMASPGVNQVTSTVDSSGSSGSISGV
EHAQIDFDAMLDDGDHSSLMSGTLSPGLLTSLSQNSSRLTTPRNSVTLASVPAGIGNMAI
GDMSSMLTTLAEESKFLNMMS
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atggagacctctgctccgacagccactgagaaaaaggagcataagggatcgggtctagat
ggaagcagcttctcagacctgccaaagaaaccatctcccactactgtgaccagaggtcct
caccatctcttccccacgtttcacacaccgatcccaatcgatatgcgtcaccacgagggg
aggtaccattacgagccacatcccctccacgccatgcatggacatcatggcctagcaggc
agcccggtcatctcagacggcatctctctgatccgtctgtccccccacgcagcagggacg
ggggattcccccttcagcccccctcactcctacgtccacccccagatggagcactacctc
cgctccatgcacagcagccccaccctctccatgatctctgctgcccgcggactcagccct
gcagaagtgacccatgagcacctgaaggagcatggtctgttcagcctgccccctccacct
ccaggtgccaaccctacagattactaccacctcatggccagtggcaggagcacttacgga
gacctcatcatgcagaccggggcggccgcagcagcagcagccgcagcagcacacctgccc
gactacatcagccctgtggatgtgtcccggttctccagccccagactgacccccaggctg
aacagaaagcgagccctgtccatctcccctctctcagacgccagcatcgacctgcagacc
atgatccgtacctcgcccaactccctcgtggcctacattaacaactcacgctccagctct
gcagccagcagctcctacggacacctgtccgtcagcggcatcagtccgtcgttcaccttc
ccccaccccatcaaccccatggcctaccagcagctgctcaaccagcagagaggcctgagt
gcgttcggccatactcctccccttatccagccctcgccctccttcgctgcccgccagcat
gcccacgccttggcagcctccaccctcaacaccacccacaacacctccagctctgagtcc
aaccagaatgctggtggtgacccggcggtgagcagcacagtcaaccccatgatcaccaag
aggcacaaggtcaagacagaagcagaaggaccccggcccatatcaccatgctttcaggag
catgtcctggacctgagtgaggagctggacaaagatgagtgtaagcaggagccagaggct
gtctacgagaccaactgtcactggatcggctgcagcaaggagtacgacacccaggaccag
ctcgttcatcatatcaacaatgaccacatccatggggagaagaaggaatttgtgtgtcgc
tgggatgagtgctcgcgggaacagaagcccttcaaggctcagtacatgctggtggtccat
atgaggagacacactggagagaagccacacaaatgcacatttgaaggatgctgtaaggcc
tactctcgcctggagaacctgaagacccatctgaggtctcacacaggggagaagccttac
gtctgtgaacacgagggctgcaacaaagccttctccaacgcctcagacagagccaagcac
cagaacagaactcactccaatgagaaaccctacatctgtaagatccctgggtgcactaag
cgctacacagaccccagctctctcaggaagcatgtgaagacggtccacggacctgaggcc
cacgtcacgaagaaacaacgtggcgatgtgccccccaggggtcctcctaaggggaatgga
gagaacgaggcaaacgccaaacagagtcgtagagggatggatggaaaaatggaggccaac
agcaccattagaggagcagaggactgcctgcaggtcaagtcaatcaagactgagaactca
ataacgtatcaatccagcccgggcggtcactcgtcatgtagcagtgagccgtcgccactt
ggcagtgcccacaacaatgacagtggagtagagatggccctgcacagtgggggcagcttt
ggggacctgagtgcactggatgaccctcccatggtggactcctctaccctctccccccgc
aactcggtgggggtgggtcttgggcttcataaagggggaggagtcactatcaagctggag
aacatcaagaaggagaggctcaagaatgtgagggactcttgtccctgggccaactctggt
cctcaggcacctcaggtccgaaacaccaagctgcctcccattcctgctgttggttccctt
ctggaaaactctaatatgatcgctccacccgggctctaccctggtcagcgtcttggtgac
ctgtcatcatgcgaggtgaccatgctgaaccagctaaacgaacagggccgccgggacagc
aacaccagcactgccagctcagcctacatcagccggcgctcctctggcatctccccttgc
tactccagccgccgctcctccgaagcctcgcagttcagcaaccgccacaacaacatcagc
tcagccgactcctacgaccccatctccacagacctgtcccgtagatccagcgaggccagc
cagtgtggaggtggaggtggaaacctctctagtttgctcagcctcactcctgcccagcac
taccatctcaaggccaagtatgctgctgcaaccgggggagctccacctacacctctgccc
aacatggagcgtatgagcctcaggaccaggatggccctgtacggggaccactcccaggaa
agagagagcttatcccactctcaactgttccacccacctaccgcagccgttcccagacgc
tgtagcgacatcggctatggtagccatagcatgatgccccacgaggtccctgggaacctt
ccccggcgagccagcgaccccgtccgcagacctaccctagacccactatcccttccacga
gtccaacgctacaacagcatgaacagtatgaaccccaacagtatgatgcctcctccctct
gccgaccgccggggcctggccatgcagagctacacgcgatccgacggaagcctgcaccac
caccccttcgccccacggccccccagcatctcagagaacgtggtgatggagaccatggcc
gtggacgggctggaccatgcaggagatgaggacatggtgctgcctgatgatgtcgtacag
tacctcaggtctcagaacactggccctggccaatcagcaggccccgccaactacgccaac
agccaatcacaaggcggcttccaggtccaggggaatatgacctcctcccaacagcagttc
tatgggcagaggaggatggccatggtggatgccaacatgcccctgtctgggtcaagccag
gttcccctacccccctaccagatgagccctgggtctggctcccagcagcagcagtaccca
gcctctcacagtaggaacaacaagaacaacatgccagtccagtggaacgaggtcagctca
gggactgtggatgctacagccacctccagactcaccaagcagaacctcctcagaaacaac
aacctggccatggtccagcagagacagaactttgggcatttccagggtagaatgggtagt
aacagtaaccagcaggtgatgcccatgagccagaatatggcgctacaaggctacacccag
agaagcaactcccagtggatcaactctgtccaacagcaacaaaggcagccatgcagcatg
aactatcctgagcagatgagtccccagcagggatatggccaagagatcatccctgttcct
aactctggatctgggaatggcagctttcgacccaactttaatggcatggcactgcccaac
ggcagggtgatggctacacacaacaatcctgatacgcagatctacaggtcaaggactccg
gttgaaagctatgccccccacatgattcaggttgaccagcagaactacagtatttcttct
cagcagcaagacgtcaatactgggaacagagctgggatgcagcccaggcctcccatggag
cccaagtctatgagcagtagacaacactcagggtccagaggtatgatgcagcagaaccgt
ttccctcagtctgacttgcatcacaacacctctgaggccagtccaaagagaccgggtagc
accgcagcacataccggcggacataacagagactcaaactccaatgcttcaatgttttat
gctggccagatccagatgtttgaacccaataacaaccacaatgtgagcttcaactccccc
atgtcccccgttatgggccagacaccgggaggcaccactgttaccatggcatctccaggg
gtcaaccaggtcaccagcaccgttgactcatccggctcctctggatcgatctctggcgtg
gagcatgcccagatcgactttgacgccatgttggatgatggagaccactccagcctgatg
tcagggaccctcagccccggactcctcaccagcctgtcccagaattcctcgaggcttacc
accccccgtaactctgtgaccctggcctctgtgccagcagggatcggtaatatggccatc
ggagacatgagctccatgttgaccaccctggctgaggagagcaagttcctcaacatgatg
agctaa
DBGET
integrated database retrieval system