Oncorhynchus mykiss (rainbow trout): 110520820
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Entry
110520820 CDS
T07259
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00310
Lysine degradation
omy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110520820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110520820
Enzymes [BR:
omy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
110520820
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
110520820
Heterochromatin formation proteins
Other heterochromatin formation proteins
110520820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
MBD
Pre-SET
DUF4537
NatB_MDM20
Motif
Other DBs
NCBI-GeneID:
110520820
NCBI-ProteinID:
XP_036824061
LinkDB
All DBs
Position
3:9490333..9508263
Genome browser
AA seq
1273 aa
AA seq
DB search
MDNNDDGMEVEGWDSGLEEELGVSLEELSKWIEEEVERSEAVRQRKAQLAELKEWVEQKE
KEEEVVDKLFNNANQSIVECEALVKSTYSKMGLVYKESSSEDEGGVGGFQSSDVIEIDDD
DDDDDVIAVGLLVPPKKPGMPVHDAMFKEASAALQRSSQQVLKLAQTVNKNSSSGPAIQQ
TGGPVPMPAVFVSQATPRNTPTQPNPSLKDDEIRLEMSLLGKKRTKTWHSGMLIAINPVG
NGYSKYKVKFENKGKSLLSGNHIAFHYHPTLERLYVGARVVAKYKDGNQVWLYAGIVAEM
PNNKNRMRFLIFFDDGYASYVTLPELYPVCRPMKRTWEDIEDASCKDFIEEYITSYPNRP
MVLLKAGQVIKTEWEGTWWRSRVEEVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNLKTN
CANTQEKKMAGQQRTRPSMGALRTKGPVVQYHSGGNTITPSGTPTKSPHPLSPPSSIPPT
PSQPNQLARTDPKYQMAKKSTSPYIPTPGGSRTGLASNSHAPKAMQPQPPTGSPGNSSRM
YVLQTGNIQTLTSLQPIQHQQQSLPPPPQAPPTAPAPAVTPYTFSNDRIPHEPSYRAPTD
RIFYLPHTCQPACLNRIRPSRPDMHRGRNPLLTPLLYEFRRMTGRRRVNRKMSFHVIYKS
PCGLCLRSMAEIQRYLFQTRCDFIFLEMFCLDPYVLVDRRFQPQKPYYYIRDITNGREDI
PLSCVNEIDITPPPDVAYSKERIPEDGVFINTSPEFLVGCDCTDGCRDKSKCSCHQLTLQ
ATACTPGAQINHTAGYTQKRLEECLPTGIYECNKRCKCCSQMCTNRLVQHGLQVRLQLFK
TQNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEG
YESEAHCSDSDGSGVDMSRLKNPPSSSLALQNKTLPKPPQRTNAANPAGKARGAGGDSSK
DGDSDEESNNDKSSDDTFVKDPYYSSSSVWRSYTTRRQAKGVMEGSQDSKDGMSVSVGGK
EDRKPPPMPEESGKSKVASWLTNQPSTSQATVKMEGLKIEKKVGEGGEPGDQKSQQSVKT
EGGKRQDVMTLSDSDDVQTISSGSDDNKEREKRTQGEDGGGAVKRQVAVKSTRGIALKNS
HGLMVKTGGAGMGPGGGPGGHGGAQGKGGDGGDSGPKNTRQFFDGEESCYIIDAKLEGNL
GRYLNHSCSANLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELL
CCCGSTECRGRLL
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggacaataatgatgatgggatggaggtggagggctgggactctggtctggaggaggag
ctgggtgtgtctctggaggagctgagtaagtggattgaggaggaggtggagaggagcgag
gcagtccgccagaggaaggcccagctggctgagctcaaagaatgggtggagcagaaagag
aaggaagaggaggtggtggacaaactcttcaacaatgccaaccagtccatagtggagtgt
gaggcgctggtgaagtccacctacagtaaaatgggtctggtctacaaggagagttcttca
gaggacgagggtggagtgggagggtttcagtcctctgatgtcatagaaattgacgatgat
gatgacgatgatgatgtcatcgctgtgggcttactggttccacccaagaaacctgggatg
cctgtccatgatgcaatgtttaaggaggcgtcggcagctctccagcgttcctcccagcag
gtgttgaagctggcccagacagtcaacaagaactcttcttccgggcctgctatacaacag
acaggtggcccagtgcccatgccagcagtgtttgtgtcccaggccacacccaggaacaca
cccacccagcctaacccctccctgaaggatgatgaaatcagactggagatgagtcttctg
ggaaagaaacgcaccaagacctggcacagtggaatgctcatcgccatcaaccctgtcggt
aatggttacagtaagtacaaggtaaagtttgagaacaaggggaagagtctactctctggg
aaccacatagcgtttcactaccaccccaccctggagaggctatacgtgggagccagggtg
gtcgccaagtacaaggacggcaaccaggtctggctctacgctggcatcgtggcagagatg
cccaacaacaagaaccgcatgaggttcctgatcttctttgacgacggttatgcctcctac
gtgaccctgcctgagctctatcctgtctgcagaccaatgaagcgtacatgggaggacata
gaggatgcatcgtgtaaagacttcatagaggaatatataacatcataccccaacaggccc
atggtgctgctgaaggcaggccaggtcatcaagacagagtgggaggggacgtggtggagg
agcagagtggaggaggtggacggcagcctcgtcaagatcctcttcctggatgacaagcgt
agtgagtggatctaccgcggttcaaccaggctggagcccatgttcaacctgaagaccaac
tgtgccaacacccaggagaagaagatggctggccagcagaggacacgccccagcatggga
gcattgaggaccaagggccccgtggtccagtatcacagtggggggaacaccataaccccc
agtgggacccccactaaatccccccatcccctctccccaccctcctccatccctcctaca
ccctcccagcccaatcagcttgcacgaacagatcctaagtatcagatggctaagaagagt
acttctccatacattcccacgccaggaggctctcgcactggattggccagtaacagccac
gcccctaaagccatgcagccccaacctccaactggttctcctggaaactcatccagaatg
tatgtccttcagactggcaacatccagactctcacgtccctacagcctatccaacaccag
cagcagtctctgccccctcctccccaagcccctcccaccgcccccgcacctgcagtgacc
ccatacaccttcagtaacgaccggattccccacgagccctcgtaccgcgcccccacagac
cgcatcttctacctgcctcacacctgccagcctgcttgtctcaaccgtatccggccctcc
agaccagatatgcaccggggcaggaaccccctgctcacccctctactgtacgagttcaga
cgcatgacgggccgaaggagagtcaaccgcaagatgtcgttccatgtgatctacaagtct
ccttgtgggctgtgtctgcgcagcatggcagagatccagcgctacctgtttcagacgcgc
tgtgacttcatcttcctggagatgttctgcttggacccctatgtcctggtcgaccggcgc
ttccagccccagaagccttactactacattcgagacatcaccaacggccgcgaggacatt
cccctgtcctgcgtcaacgagatcgacatcacaccaccccccgacgtggcctacagtaag
gagcgtatccctgaagacggagtgttcatcaacaccagtcctgagttcctggtgggctgt
gactgtaccgacggctgcagggacaagtccaagtgttcatgtcaccagctgaccctgcag
gccacagcctgtacccctggagcacagatcaaccacacggctggatacacacaaaagaga
ctggaggagtgtttgcccaccgggatttatgagtgtaataagcgttgtaagtgctgcagt
cagatgtgtactaaccgtctggtgcagcacggtctgcaggtgaggctgcagctctttaag
acccagaacaaaggctggggcatccgctgtctggacgacgtggccaaggggtccttcgtc
tgtatctacgcaggtaagattctgacagatgactttgcggacaaggagggtctggagatg
ggtgatgagtactttgctaacctggaccacatagagagtgtggagaacttcaaggaaggg
tatgagagtgaggcccactgttcagacagtgacgggagcggggtggacatgtccaggcta
aagaaccccccctcgtcctccctggctttgcagaacaagacccttcccaaacccccccag
agaaccaatgccgccaaccccgctggcaaagcgcggggtgctggtggcgactcctctaag
gatggggatagtgatgaagagtcgaacaatgacaaaagttcagacgacacgtttgtgaag
gacccctactatagctccagctctgtgtggaggagctacaccacccgtcgccaggccaag
ggcgtcatggaagggagccaggacagtaaggatgggatgagtgtgtcagtgggggggaag
gaggacaggaagccgccccccatgccagaggagagtgggaagagtaaagtagcgtcctgg
ctcaccaaccaaccctctacctcccaggccaccgttaagatggagggactgaagatagag
aagaaggtaggggaggggggggagcccggagaccagaaaagtcaacaatcagtgaagacg
gagggagggaagagacaggatgtgatgacgctgtcggacagtgatgacgtccagaccatc
agctctggatctgatgacaacaaggagagagagaaacgcacacagggtgaagatggggga
ggtgcggtgaagaggcaggtggctgtgaagtccacgcgaggcattgctctgaagaactcc
catggcctgatggtgaagactggaggggctgggatggggccagggggaggcccggggggc
cacggaggggcacagggtaagggtggggacgggggagacagtggacctaaaaacacacgg
cagttcttcgatggcgaggagtcctgctacatcatcgacgccaagctggagggcaacctg
gggcgctacctcaaccatagctgcagtgctaacctgtttgtccagaatgtgtttgtagac
acacacgatctgcgtttcccctgggtagccttcttcgccagcaagcgtatccgggcgggg
acagagttgacatgggactataactacgaggttggcagtgtggagggaaaggagctactg
tgctgctgtggctcaacagagtgcagaggaagactgctataa
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