Oncorhynchus mykiss (rainbow trout): 110522229
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Entry
110522229 CDS
T07259
Name
(RefSeq) exostosin-1
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
omy01100
Metabolic pathways
Module
omy_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
110522229
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
omy01003
]
110522229
Enzymes [BR:
omy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
110522229
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
110522229
Glycosyltransferases [BR:
omy01003
]
Glycan extension
O-Glycan
110522229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
110522229
NCBI-ProteinID:
XP_021456122
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All DBs
Position
4:complement(18022013..18286490)
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AA seq
748 aa
AA seq
DB search
MQAKKRYLVVSLGACLLLVAYLWGLQIGEFHHQNHHQHLFRVAQSPGFSLLRQRWPEWTH
PLNTYLEDGEQEEDSPLLHHQHTSPRERREIRNNIYKSRRCRMDTCFDFSRCQRGFKVYV
YPLLKGETVSESYQKILTAVEDSRFHTTDVNEACLYVLGIDTLDRDQLSSQYIHNVKAKV
QSLPTWNDGRNHLIFNLYSGTWPYYTEELGFDIGQAILAKASIDMDHFRPHFDVSIPLFS
KDHSQKGGDKGYLTLKNVPPSRKYLLVFKGKRYLTGIGSETRNALYHIHNGEDIILLTTC
KHGKDWEKHKDARCDRDNEEYSKFDYQELLHNSSFCLVPRGRRLGSFRFLEALQAACIPV
ILSNGWELPFSEIIDWSKAAVIGDERLLLQVSSITRSVDHDKILALRQQTQFLWDAYFSS
VAKIVLTTLELIQDRINSHVSRNKLMWNSLPGGLYVLPQFSTDAAVFPFYYLSLGKSPSQ
EFTAVIQAVTPLQSQLQPVVKLIIAVAKSKFCAQIIVLWNCDKPLPPKSKWPSTTVPITV
IEGERKTMSSRFSPHDVILTDAVLSLDEDSVLSTNEVDFAFIVWHSFPDRIVGYPARSHY
WDSSKSRWGYTSKWTNQYSMVLTGAAFYHRYYHYLYTHYLPSSLLTMVDQMANCEDILMN
FLVSAVTKLPPIKVTQKKQYKETMMQQGSKTSRWADPDHFAQRQTCMNSFSSWFGFMPLL
HSQMRLDPVLFKDQVSILRKKYRDIERL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaagaagaggtacctggtcgtgtctctaggggcctgtcttcttctggttgcc
tacctgtggggacttcagattggggagttccatcatcaaaaccaccaccagcacctcttc
agagtcgcccagagccccggctttagcttgctcagacaacgttggcctgagtggacccac
ccgctcaacacctacttggaggacggagagcaggaggaggacagccctttgctccaccac
cagcacacctctcccagggagaggcgggagatccgcaacaacatctacaagagcaggagg
tgccgcatggacacatgcttcgacttcagccgctgccagagggggttcaaggtgtacgtc
taccccctgctgaagggggagacagtgtctgagagctaccagaagatcctgacagctgtc
gaggattcccgcttccacaccacagacgtcaacgaggcctgtctgtatgtgctgggcatt
gacactctggaccgggaccagctgtccagccagtacattcacaatgtcaaggctaaagta
cagagccttccaacgtggaatgacgggaggaaccacctcattttcaacctctactctggc
acctggccatattacacagaggagctgggctttgatattggccaggccattttggccaaa
gccagcattgatatggatcattttaggccacactttgatgtgtccattcctttgttttca
aaagaccattcccaaaaaggaggggacaagggatatttgacactcaaaaatgtccctcca
tcaaggaaatatttgctggttttcaaagggaagaggtatctgactggtatcggttcagaa
accagaaatgctttatatcatattcacaatggggaagatatcattctattgaccacctgc
aagcatgggaaggactgggaaaagcataaggatgcaagatgtgaccgggacaatgaagaa
tactcaaagttcgactaccaggagctgctccacaactcaagcttctgtctggtgccccgc
ggtcgcaggctgggttcctttcgctttcttgaggccctccaggctgcctgtatccctgtc
atactgagcaacggctgggagctgcctttctctgagatcatcgactggagcaaagcagct
gtcatcggggacgagaggctcctactgcaggtttcttcaattaccagatctgtggaccat
gacaaaatattggcgctcaggcagcagactcagttcctctgggatgcgtatttttcttcg
gtagcaaaaatagtattaactacattagagctaatccaagacagaataaattcacacgta
tccaggaacaagttgatgtggaattcgttgccgggtggactgtacgttctgcctcagttc
tccacagacgctgcagtgttccccttctactacttgtctctggggaagagcccgtcccag
gagttcactgctgttatccaggccgtgactcctctccagtctcagctgcagcccgtagtc
aagctcatcatcgctgttgccaaatccaagttctgtgcacagatcattgtgctgtggaat
tgtgacaagcctttacctccgaagagcaagtggccctccaccaccgtgcctatcactgtc
attgagggagagagaaagacaatgagcagtcgcttttccccccatgacgtcatcctcaca
gatgctgtcctcagtctggacgaggactccgtcttgtcgaccaatgaggttgactttgcc
ttcattgtctggcacagtttcccagaccggatcgtgggctacccagcacgcagccattac
tgggacagcagcaaatcaagatggggctatacctccaagtggactaaccagtactccatg
gtactcacaggggctgcgttctatcacaggtattatcactacttgtacactcactacttg
ccatccagccttctcaccatggtggaccagatggctaactgtgaggatatcttgatgaac
ttcctggtgtctgctgtcactaagctcccaccaatcaaagtcacccagaagaagcagtac
aaggagacaatgatgcagcagggttctaagacgtctcggtgggccgacccggaccacttt
gcccagagacagacgtgtatgaactcgttcagcagctggtttgggttcatgcccctgctg
cattcccagatgagactggaccctgtgctgttcaaggaccaggtctccatcctgaggaag
aagtacagggacatcgagaggctgtga
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