Oncorhynchus mykiss (rainbow trout): 110523412
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Entry
110523412 CDS
T07259
Name
(RefSeq) toll-like receptor 8
KO
K10170
toll-like receptor 8
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110523412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omy04054
]
110523412
04090 CD molecules [BR:
omy04090
]
110523412
Pattern recognition receptors [BR:
omy04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
110523412
CD molecules [BR:
omy04090
]
Proteins
110523412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_EndoS
TIR
LRR_NXF1-5
LRR_9
TIR_2
LRR_12
DNAP_B_exo_N
LRRNT
Motif
Other DBs
NCBI-GeneID:
110523412
NCBI-ProteinID:
XP_021457764
Ensembl:
ENSOMYG00000004379
LinkDB
All DBs
Position
5:21602033..21609081
Genome browser
AA seq
1033 aa
AA seq
DB search
MKEHWFPLSPAFQRLLFILVLLCLSLSCSGRTWAQRKLPCDVISLNQSESFDCSDRKLLQ
VPQDISRNATRLDLSSNRIKKLSGISFRNLRNLTRLDLSNNFHPQKHPLTIENQTFSMLD
QLKELLLDSNGLSAVPSALPSKLRFLSLKFNCIKTIRPNDFMHVRLLETIHLIGNCDYKS
VCNGLVIGNRTFSHLTNLASLSLSNNRLIGVPLFLPPSLQQLKLKQNTITYIHQHDLSGL
TSLRLLGLSGNCPVCSNTPFFCSPCNTPNGALQIHPYAFRKLSKLQELRLSGNSLDHLQS
SWFENLTNLRYLYLSFNRLVGEIANGDFLSVLPGIEVMDLSYNHPGQSSYSHNLKLSRNF
SNLTSLKTLHLENYVFSTLHKNDLNPLYNLSHLSVLNLGTNFIYQTNPSLFGMFHNLSSV
GLSENKFAFLSKKEDVLSTCGCSCGYELNRDRFGPYVHKDRLFRQHLPNIKPKCIAYGSV
LDLSRNNIFHINPDMLQGLDNTACLNLSSNSIGDMFNGSEFVHFPKLKYLDLSRNKIYLH
YEHAFSELTELEVLDLSHNNHYFVVAGLNHSLAFMENLSSLKVLNLSWNEISTLTHNNIS
SSSLQELDFQGNRLDIMWKICQNYELFRALQNLTSLDLSYNKLHRVPPEVYKHFPKTLRR
LSLSKNRLKVFDWERLTQLPHLEELDLSKNKLEQVACALTSSLKFLDLSHNRISQLAPGF
LRGARSLYVLDLSFNLLELINQTTFESGAENHLQQLSLQGNPLHCTCDLLDFHLWMRSNE
VELPLLATEVTCDMPVERRGKSVLSYDIEECVNDENAMAFCIITSFLIILTLLVSLTAHL
FYWDLSYILDYCGAKMKHHRRLVPTDFIYDAFVMYDTADPLASDWVLNHLRVELEERGER
ARSLCLEERDWSLGMPVMDNLSNSVRQSRKTVFVLTDGFLLRGVVKMAALLVQQRLVEEG
VDSMVLLLLQPQVLQHSRILHLRRRLCRRSVLEWPADASPAAQRWFWHHLKRTIRKDQIG
THTSLHSTYFTGR
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaacactggtttcctctttcccctgcctttcagagactgctgttcatcctggtg
ttgctgtgtctctccctctcctgctctgggaggacctgggctcagaggaaactaccctgc
gatgtcatctctctcaaccaatcagagtcctttgactgctcggacaggaagctactccag
gtaccccaggatatcagccggaatgccacacggctcgacctttcctctaacaggatcaag
aaactctccggcatctcgttcaggaacctccgaaacctgactcgactagaccttagcaat
aacttccacccccagaaacatcctctgacaatagagaaccaaacattctccatgctggat
cagctcaaggaactgctccttgatagtaatggtctttctgcagtgccaagtgcccttcca
tccaagctgcggtttttgagcctgaagttcaactgcatcaaaaccatcaggccaaacgac
ttcatgcatgtcagactcttagaaacaatccacttaattggaaattgcgactacaagagt
gtctgtaatggactagtcatcggaaacagaactttctcccacctcaccaaccttgctagt
ttatcgctgtcaaacaacagactgataggtgtccccctgttcctccccccatccctccag
cagctcaaactcaaacagaacactatcacctacattcaccagcatgatcttagtggcctc
actagcctgaggcttctgggcctgtcaggtaactgccctgtgtgttctaacaccccgttt
ttctgctcgccctgtaatacacccaatggggcactacagatacacccatatgccttcagg
aagctatccaagctgcaggagctgagactatccggaaactctctagatcacctacagtcc
tcctggtttgagaacctcaccaacttgcgctacctgtacctttcattcaatcgtctagtt
ggtgagatagccaacggggacttcctctctgtgttacccggcatagaggtgatggacttg
tcttacaatcaccctggacaatcttcatattcccacaacttgaagctctctaggaacttt
tccaacctgacatctctgaagacattacacctagaaaactatgttttttcaactcttcac
aaaaatgacttgaacccactttacaatttatctcacctgtctgtgctcaatctgggaact
aactttatctatcagacaaacccctcattgtttggcatgttccacaacttgtccagtgtt
ggcctctctgagaacaaatttgctttcctgtctaagaaagaagatgttttgtcaacatgt
gggtgtagctgtggctatgagctgaatagagacaggtttgggccttacgtacacaaggat
cgactctttcgtcaacatctgcctaacattaagccaaagtgtattgcgtacggttcagtg
cttgaccttagcagaaacaacatcttccacataaaccctgatatgctgcaaggcctggac
aacacagcttgtctcaacctgtcatctaactccattggagacatgttcaacggtagtgag
tttgtacatttccccaaacttaagtacttggatctatcccggaataagatctacctgcac
tatgagcatgcattcagtgagctaacagaactggaggtgttggacctgagtcataataat
cattactttgtggtggcagggctaaaccacagcttagcattcatggaaaacctgagctct
ctgaaggttttgaacctgagctggaacgagatcagcaccctcactcataacaacatctca
agcagctccctacaggagttggacttccaaggcaaccgcctagacatcatgtggaaaata
tgccagaactatgaacttttcagagcgctccaaaacctgacttccctggatctgtcatac
aacaagctccaccgtgtaccgcctgaggtctacaaacacttccccaagaccctgagacgc
ctgtctctgagtaaaaaccgactgaaggtctttgactgggagaggctcacacaactaccg
catctggaggagctggacttgagtaagaacaaactggagcaggtggcctgtgctttaacc
agttcactaaagttcctggacctgagccataacaggatttcccagctagcgcctggtttc
ctcaggggcgccaggagcctgtatgtgctggacctcagcttcaacctgttggagctcatc
aaccagaccacatttgagtctggagcagagaaccacctccagcagctgtccctacagggc
aacccgctccactgcacctgtgacctgttggacttccatctgtggatgaggagcaatgag
gtggagctccctctgctggctactgaggtgacatgcgacatgcccgtggagaggagaggc
aagtctgtgttgagctatgacatagaggagtgtgtgaacgatgaaaacgcaatggccttc
tgcatcatcacgtcatttctcatcattctcactctgttggtatctctcacagcacacctg
ttctactgggatctctcctatattctggactactgtggggccaagatgaagcatcaccgt
cgcttagtgcccacagactttatctacgacgcctttgtcatgtatgacaccgcagacccg
ctggcttctgattgggtattaaaccatctaagggtcgagctagaggagcgtggagagagg
gcacgatccctctgcctggaggagcgtgattggtcactgggtatgcctgtcatggacaac
ctgtccaatagcgtgcggcagagcaggaagacagtgtttgtgctgacggacggcttcctg
ttgcgtggtgtagtcaaaatggctgccctgctggtgcagcagcggctggtggaggagggg
gtggactccatggtgctgctgttactgcagccccaggtcttgcaacactcacgcatcctc
cacctgcgcaggcggctctgcaggcgcagtgttctggagtggcccgcggatgccagtcca
gctgcccagcgatggttctggcaccacctgaagagaaccattaggaaagatcagataggc
actcacacatccctacacagcacatacttcactgggcggtga
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integrated database retrieval system