Oncorhynchus mykiss (rainbow trout): 110523473 Help Entry 110523473         CDS       T07259                                  Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy04010   MAPK signaling pathway omy04137   Mitophagy - animal omy04141   Protein processing in endoplasmic reticulum omy04210   Apoptosis omy04217   Necroptosis omy04621   NOD-like receptor signaling pathway omy04622   RIG-I-like receptor signaling pathway omy04920   Adipocytokine signaling pathway omy05132   Salmonella infection omy05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:omy00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     110523473  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     110523473  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     110523473   09143 Cell growth and death    04210 Apoptosis     110523473    04217 Necroptosis     110523473  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     110523473    04622 RIG-I-like receptor signaling pathway     110523473   09152 Endocrine system    04920 Adipocytokine signaling pathway     110523473  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     110523473   09171 Infectious disease: bacterial    05132 Salmonella infection     110523473  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:omy03019]     110523473    04121 Ubiquitin system [BR:omy04121]     110523473 Enzymes [BR:omy01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      110523473 Messenger RNA biogenesis [BR:omy03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      110523473 Ubiquitin system [BR:omy04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     110523473 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 zf-C3HC4_2 TRAF3_RING zf-C3HC4_4 zf-RING_5 Sina_ZnF zf-RING_4 Motif Other DBs NCBI-GeneID:  110523473 NCBI-ProteinID:  XP_021457858 Ensembl:  ENSOMYG00000008576 UniProt:  A0A8C7P677 LinkDB All DBs Position 5:23906231..23929665 Genome browser AA seq 595 aa AA seqDB search MATEEPSPPSSMESNKPGFPKQILANKLEDKHLCNCCQKLLRRPFQAQCGHRFCSYCFNR TVRDGPQKCSACIKEDIFEEPTSILKQGCAFPDNAARREVENLSVVCINEGCTWKGNIKE YELSHEGKCDYMIIPCPSCKEQIRFNEQERHNERECPERTLNCKFCKEPFHFKNIKAHDE ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKERIHDHERACA YEHLNLLLHYIMGMKVSMEGLQPQGLELAGHKLLELHHSLRELEARVSQLSTNSTGPPVQ GATNSSSSPGLSGPPTLALPLPPPPALAPTLTVSTSFTPLPSSVGAALELQLHSEKTKVA ELGRRCTDLEVKAGMFENVVCVLNREVERFATTMEASNRQHRLDQDKIEVLSNKVRQLER TVGLKDLTVAEMEGRLREISGTTFDGVFIWRISDFTKKRQDAIAGRAPAMFSPAFYTSKY GYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNREHIIDA FRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIVDLTGL NT seq 1788 nt NT seq  +upstreamnt  +downstreamnt atggccacggaagaaccatcccctccgtcgtccatggagagcaacaaacccggcttcccc aaacagatcctggccaacaagctggaagataaacacctgtgtaactgctgtcagaagctg ctgcggaggcccttccaagcccagtgtggacaccgcttctgttcctactgcttcaatagg actgtcagagatggacctcagaaatgcagtgcttgtatcaaagaggacatttttgaagag cccacgtcgattctaaaacaaggctgtgcttttcctgacaacgcagctcgacgagaggtc gaaaacctctctgttgtctgcatcaacgaaggctgtacctggaaaggcaatattaaagaa tatgagttgagccacgaggggaagtgtgactacatgatcatcccctgcccctcctgtaaa gagcagatccgcttcaacgaacaggaacgccacaatgagcgagagtgccctgagagaact ctcaactgcaagttctgcaaggaaccattccatttcaaaaacatcaaggcccacgacgag atctgccccaagtaccccatgatctgtgaaggctgtgccaagaagaaaatacccagggag aagtacgtggaccacattaagttctgcagcaaattcagaactccatgcagattccatgtt gttgggtgtgatatgtcagtggagaaggagaggatccatgaccacgagagggcctgcgcc tatgagcacctcaacttgctgctgcactacattatggggatgaaggtgagcatggagggc ctgcagccgcaaggcctggagctggctggacacaagctcctggagctccaccattccctc agggagctggaggcacgcgtctcccagctcagcactaactccaccgggcctcccgtgcag ggggccaccaactcttcttcctccccgggcctctccgggcctcccaccctagctcttccc ctgcctccacctcccgccctggcccccaccctgactgtgtccacctccttcacccccttg cccagctcggtgggggcggccctggagctacagctccacagtgagaagaccaaggtggcg gagctgggacgcaggtgcaccgacctggaggtgaaggcggggatgtttgagaatgtggtt tgtgtgttgaaccgagaggtggagcgctttgccacaaccatggaggccagtaacagacag catcgcctagaccaggataagattgaggtcctgagcaacaaggtgcggcagctggagagg acggtgggtctgaaagacctgacggtagcagagatggaaggcaggctgagggagatatcg ggcaccacattcgacggcgtcttcatctggaggatctctgactttaccaaaaaaagacag gatgccattgctggccgagctcctgccatgttctcaccagccttctacaccagtaaatac ggctataagatgtgtctgcggatctacctgaacggggacgggacagggcgtggcagccac ctgtctctgttctttgtggtgatgaggggactgagtgatgctctgctcaaatggcccttc aaccagaaggtgactctgatgctgctggaccagagtaacagggagcacatcatcgatgcc ttccggcccgacgtcacttcctcctccttccagaggcctgtaagtgagatgaacatcgcc agcggctgcccgctcttctgcccgctctccaagctcgacgccaagaactcctacatccgc gacgacaccattttcattaaggccatcgtggatctcacaggcctctag

DBGET integrated database retrieval system