Oncorhynchus mykiss (rainbow trout): 110523761
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Entry
110523761 CDS
T07259
Symbol
cplane1
Name
(RefSeq) ciliogenesis and planar polarity effector 1 isoform X1
KO
K22859
protein JBTS17
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110523761 (cplane1)
Cilium and associated proteins [BR:
omy03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
110523761 (cplane1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Joubert
Motif
Other DBs
NCBI-GeneID:
110523761
NCBI-ProteinID:
XP_036833335
LinkDB
All DBs
Position
5:38200514..38230167
Genome browser
AA seq
3303 aa
AA seq
DB search
MELKLEVVLSSSIKRKKPWPRFCWLGLEKESVFLLDDKRISEINMVSGHTKKKTPKLQPL
LPRVVTMAASQNGVWLAGLLVSGEMFLWSRDKDFLKTVAAVPTEAQLVTAAQGSGVCLSL
VVSGDGMRVLLLTVTGQVFLWECVDVRDLAGVRDGTARGRWAQIQHPGNTALPSPKDKEA
SQHSIFVRGEAVGDICLSAFVFTSEVELSVTFLKIQWEEGQRSSPVGYSVRWVTKTYPMS
CLTPPCRPVRSRGSLVPAFSPDGLLLAVVLNQRDPRATQVLFVSTQNFVIVSSGLGGCGS
KKLVIPSKYVRSYWVGSVSWAAGGLYLACVLKRGSFLMLARLGGLLSLSTSGCSVDFGPA
HFLPLHPLVTYRPPVSVGGAGVDPLSSSSLSVRDVLRQRYSVTWHPRLPYLIVSDGYMAT
VLRVPEQPSPATLLRALLHDTSQGLESASRALGRTQPHARAWLESISCLNPSSSLQELRA
RPTPVPTPTATATSTLPLFLQDQGDLGDTRELIQRVQALFEDDSDLEGPPAGSHVEDHGR
LEFASMFDTLHALSDTLADLDPSSHPDPDASSADSERSPPALPPELRGVHGSLLTAWALG
VSLGGVMEQRERLLKYTVRCAVRFAALLRLISIPSSHTGKRKNSTIPFSSRLLHLLRTLL
SFLPWGAPHTGGRSCLGLVVELTQQLVGLLLSSPPDLSQTGQASSEPSSQTLSTALLLLQ
LTSHSMDHTYSLQQKCAHTDVYCVLFLQEEGRGPSQQDLPLPQWPSSRLRGAWRAVYRHT
LQYWEELKYRRSGTDWEEEQGRVSVILSQIQTALQGIGERLEEGPTLLSYTGEQHFLFGS
YSESAQTWRAELWAERERDGPRSAFLETRLLLSLLYGLLFQYRLKEAQGLGDHMARLLLH
QAGPHGDDSAHNTEEALPGSWLPGEVHREAACAVVQTLGRFMASYFTNQPLLILPPHSVD
VLPPLHLPHAPGVGRLVPLCQEGVAGAVRGQQLSEVWTVGYALDLLLQGGLLPEATWLAH
RLGDWKTAVSLGLAYTTYSTEHCDFTGLRWRELHLPASLEPVSLFQGQLESLLGRKARSE
ETQGDEESYKSFTDSLEGEDVELLQGSVQEILKASVMAGVDVLSQPLGALLDSAKDLSSC
LPALVPMGLYLPAPPLYCPQPAPNTQDPSGGFGQLLEGASRHRVSGVLQRVLLLLRSARC
SRPAAQWYISHLRRSRHRLDKIRQKYSQQQCVTKAFPEALMKFVTRSGFFRLGPSGDGTM
DSVTIQTIICFRELCGLCWMLNVRDQLSMSCRKYQAARNHGRDPQVPADDSEVTAACEEA
LHWACRFLPFSRFLNAEEILQDTLLSLVSELPPVPLVAETLVQAFPEEEESVRVPLREKY
NSLLRRLRHCTVPASGQNGEKRDEEEGEEVMMILVQERLRQRRKDLKRLARHLAPLELYL
WEREEEQDRGGGGQGALALLERFSLGASLSNSTLTDCGRPLVYSDGDTAENSVALSPDLH
SRPPHSISKRVRVQDRADKPGSQVEVVEGGSTQEEDQSCTGPAKDPALGEDSPSLTLPVV
GTWEFELEDAEYLRFLELFLSYVLEKDGPDPNAGCDPPLLKGFCSQLRDRELHSLTFDVL
TTLRRRQRDGRQATRRQGGSDAPVFRAGHCYKPVLITNPLFLHSEPPTPRPSMSVSVLSL
PGLRTGRQQGLFGFSLQARSASPAPEPAPQRSRLCSKSSPSQSSVPWEQPSEGWAFGPLC
SVEAVELQQELEPKLEAQFPGLGRLLEWMVRWADKRVLLGQPSRMKEREAGGGEVAGGGV
VTRVKASAPAVLTALSMLEHRYTAALLGMDHYSANLQVPERQWTVAPVLQPEVGWKLERE
SSVDTGYPASAGTPITLPDQDPQHCELSYGSQTEGVERVTSQETSQLSDPVGVNLNPESG
VADLPDNKCDLSAEKGEDSNADEALRSSASLAILNISVHIKSLRPTLSPPGQALTLADLR
CSEREENIVSSQEGEAENLLSHGSLRRPSDITEEVTRNITLSEGSGSDGPPNASFQPLPG
AGPQAGAQVADSAPNGGLPQGSTNTTPAPASAPNQTLPAQTDPVRQLLQDELFRLVQLQQ
INFMSLMQVVGASFVNFPVSQNNTLPAQSNVPYPHPNTPLSHPNTLLPHLNLTPSQNNMS
PMPQTQSSVQAPLASEPLSGGHGPTDQPPIHEMQPLAVHPEPLRDIQGQTRTLISSSHGF
QTTVDPTCSAPLLLPFGGSSQVSAPYSSGLKLLQLHPPLLSLQRHGKTAPVREAWGPPSE
RRPSTAVPPHLNPSQYDPAALGRAEERSREAERESTAPPSHLNLTQYAHYPSNQAPRNTL
PPLQNPETRVERSRGAEPRHLPPTLPSHRPPPVHGLPLLRFHPDPRPPTTFALIPLPHSS
RPLTVTPAAMGHNPRLQLLQRDPDPPRMMLPEATPPACVPHLIPLGELMGWAAGRQRGAE
ARLQLLRVDPQAQNPTPATPSTSTISSRRQKRRVDRLRREGEKAEVTFRPEDSIILPLEC
NEDEPAEPVLGEGYVFPLGTFDSVLTGQGLVDKALSTAAELHAFASTHKRPPESHDACTN
TDPASPHSDTGISAQPTVTSAASGPAALPPELFLNLRFPRDPPVHDTETSGEKRPERNTG
RQFIHVIDLEDGALLQELPSCPRPAVRDHDVTPSQPSPPTSAQLHLLAASVTNSAPSELT
ADTSTEDDQPQAQPSGLSQCFSVASLPPAHPEPSGDPVTRSLLQERRAPGRSLETHRGAP
SRAPVIQVAARLSEMDAQLAALQNIADHMEREFANTRLLVSTIETLRPAMAPERVEGRTP
VNKTVTLAVSPEGWRSRLSVHHDPELAGLCQEEEEQEEGPDSVVVSSAPWGVKQPSSLSP
HAHAVQSTSTLHQPTPTGLWLSPVRPEPEQRVWDMGQDLTDTMDGAPGTWAEETLGLSGL
SDVADILTELVRGGGISPTALGLSHTQAARLNSRLNQQQSGRAGQRGMRAEEERRELRVW
MRRKQREKLVEYRRQREEKRERERKPFSTPVTLKPTSKDININKKIKEEKDKTVLLEHHN
QRARDACSLITDLLTTPLTLPTNANRTLNLPSTSSRPSSTRPLTAQTVGSTRSSPRGRSL
SVGGRRRTSTKPQTGRARSLSSPGVTPRSERRPASSGGQETLTSRLGLHRPASFLPGDRL
SHVTRRGMITDLRGRTGTGPMTPSQQEWRREVIQSSSGRRGGGAREQRETEEREEEVVSP
WNPPPEICRLLGLENSEGQGGVVARAGGAGLDRLDTLSESTGSILSKLDWAAIESIVASE
GAI
NT seq
9912 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaagctggaggttgtgttgtcatcgagcatcaaacggaagaaaccatggcca
cggttctgttggctcggattggagaaggagtctgttttcctgctagatgacaagcggatc
agtgagatcaacatggtgtctggacacaccaagaagaagacccccaagctgcagcccctg
ctccccagggtggtaaccatggccgcatcccagaacggtgtgtggcttgccggattgctg
gtctcaggagagatgtttttatggagcagggacaaagacttcttgaagaccgtggcagca
gtcccgacagaagctcagctcgtcactgcagcacaagggtctggcgtgtgcctgtctctg
gtagtttcaggggatgggatgcgggtgctgctgttgactgtgacagggcaggtgttcctg
tgggagtgtgtggacgtgcgtgacctggcaggggtacgggatggtactgctagaggacgc
tgggcacagatacagcaccctggaaacactgctctgccatccccaaaggacaaggaggca
tctcaacacagcatcttcgtcagaggggaggcagtgggcgatatctgcttgtcagctttt
gttttcacctcggaggtggagctaagtgtcactttcctaaagatccaatgggaggagggt
cagaggagcagtcctgtggggtacagtgtacgctgggtcactaagacataccccatgtcc
tgcctcacaccaccctgtcgtccggtgaggtccagggggtcactggtgccagccttctcc
cctgatggcctgctgttagctgtagtcctgaaccaaagagacccaagggctacgcaggtt
ctctttgtcagcactcagaactttgtgattgtctccagtggactggggggatgtggcagc
aagaaactcgtcattccttctaaatacgtgaggtcgtactgggtgggcagtgtgagctgg
gctgcgggagggctctacctggcctgtgtgctgaagaggggctccttcctcatgctggct
cgtctgggggggctgctctctctgtctacctcagggtgcagtgtggactttggccctgct
cacttcctgcccctgcatccgctagtcacttacagacctccagtctctgtcggaggggct
ggggttgaccctctgtccagctccagcctgtctgtacgggatgtcctgagacagcgctac
tcggtgacctggcacccacggctgccctacctcattgtgtctgatggctacatggccaca
gtgctgcgggtccctgagcagccctcccccgccaccctcctcagggctctgctgcacgac
accagccagggcctggagagtgccagccgggcactggggcgaacacagccccatgccagg
gcgtggctggagtccatatcctgtctgaatcctagtagcagtctgcaggagctgagagcc
aggcccacacctgtacctaccccaacagccacagctacatccaccctgcccctcttcctg
caggaccagggagacctgggggacaccagggagctgatccagagagttcaggctttgttt
gaggatgactctgatcttgaaggaccgcccgctggttcacatgtggaggaccacggtcgg
ctggagtttgcctccatgttcgacaccctccatgccctctcagacaccctggctgatctt
gaccccagttctcaccctgaccctgatgctagctctgcagactcagagaggagtccccca
gccctccctcctgagctccggggggtccacggcagcttgctgacagcttgggctctgggt
gtgtcattaggtggcgttatggagcagagagagcgtctgctgaagtacacagtccgctgt
gcggtccgcttcgctgctctcctccgtctaatttccatccccagctcccacacgggaaag
agaaagaacagcaccattcccttctcctcccgcctcctccacctcctcagaacccttctc
tctttcctcccctggggtgcccctcacacaggggggaggagttgcctgggtttggttgtg
gagctaactcaacagctagtgggcctgctcctctcctcgccccctgacctctctcagact
ggccaggctagctctgagccctcctcccagaccctgtccacagctctgctcctcctgcag
ctgacctcccacagtatggaccacacctacagcctccagcagaaatgtgcccacacagat
gtctactgtgtgctattcctgcaggaggagggaagagggccatcacaacaggatctgcct
ctcccccagtggccctctagcagattgcggggagcgtggcgtgcagtgtacaggcacacc
ctgcagtactgggaggagcttaagtaccgtaggagcggtacggactgggaggaggagcag
ggccgtgtgtctgtcatcctgtcccagatccagacagctctacaggggattggagaaagg
ctggaggaagggcccactctgctgagctacacaggggaacagcacttcctgtttggttcc
tactcagagagtgctcagacttggagagctgagctgtgggcagagagagagagagatggg
cctcggagtgcgttcttggagacacgtctgttgctgtccctgctgtatggactgctgttc
cagtaccgtctgaaagaggcccaggggcttggggaccacatggcccgtctgctactccat
caggctggaccacatggggacgatagtgcccacaacactgaggaggctcttcctggctcc
tggctgcctggagaggtccacagggaggcagcctgtgctgtagtacagactctgggaagg
ttcatggcctcatatttcaccaaccagccccttctcatcctgccccctcacagtgtggat
gtactgcctcccttacacctcccccatgccccaggtgtagggcgcctggtgcccctgtgc
caggagggtgtggcgggggcggtgcggggtcagcagctgtcagaggtgtggacggtgggc
tatgccctggacttgctgctacagggggggctgctgccggaggccacctggctggctcat
cgtctgggggactggaagactgcagtctccctgggcctggcctacaccacctactccaca
gagcactgcgacttcaccgggctcagatggcgagaactacatctcccagcatcccttgag
cctgtgagcctctttcaaggtcagctggagtctctactgggcaggaaggccaggtcagag
gagacccaaggagacgaggagagctacaagagcttcacagactctctggaaggtgaggac
gtggagttgttgcagggttccgtgcaggagatcctgaaggcatcagtcatggctggtgta
gatgtgttgtcccagcccctgggggctctactggactcagccaaagacctgtcctcctgc
cttcctgctctggtgcctatgggcctgtacctgcctgcgcctccactctactgccctcag
cctgcacccaacacacaggatccatcagggggatttgggcagctgttggagggggcgtcc
cgtcacagggtgtcaggggtcctccagagggtgctgctgctcctgaggtctgctcgctgc
tcccgtccagctgcccagtggtacatcagccacctgcgacgctcccgacatcgcctagac
aagatccgtcagaagtactcccagcagcagtgtgtgaccaaggccttcccagaggctttg
atgaagtttgtgacccgcagtggattcttcagactaggacccagtggggatggaaccatg
gactctgtcactatacaaactatcatctgcttcagggagctgtgtggcctgtgttggatg
ctgaatgtcagagaccagctctcaatgtcttgcaggaagtatcaggctgcaaggaaccat
gggagagatccccaggtcccagcagatgacagcgaggtgaccgcagcctgcgaggaggct
ctccactgggcctgtcgtttccttcccttctcccgattcctcaatgctgaggagatcctc
caggacaccctcctcagcttggtctctgaactaccccctgtacccctggtggcagagact
ctggtgcaggccttccctgaggaggaggagtcagtcagggtccctctgagagagaagtac
aactcactcctgcggagactgaggcactgcactgtcccagcctcaggacagaacggtgag
aagagggatgaggaggagggagaggaggtgatgatgattctggtgcaggagcggctcaga
cagaggaggaaggacctgaagcgtctggccaggcacctggctcccctggagctctaccta
tgggagagggaggaggagcaggacagggggggaggagggcagggggctctagccctgctg
gagagattctccctgggggccagtctgagtaacagcaccctgacggactgtgggcgcccc
ctggtgtacagcgatggagacacggccgagaactccgtggctctctctcctgacctgcac
agcaggcctcctcacagcatcagcaagagagtgagggtgcaggaccgagcagacaagcct
ggaagtcaagtagaagtagttgagggtgggagcacccaggaggaagaccagagctgcacg
ggcccagctaaggaccctgccttgggggaggacagcccctctctgaccctgcccgtggtg
gggacctgggagtttgagttggaggatgctgagtacctgcgcttcctggagctcttcctc
agctacgtgttggagaaggacggtcctgacccaaacgcaggctgtgaccctcccctgctg
aagggcttctgtagccagctgagagacagggagctgcactccctcaccttcgatgtcctc
accaccctccgccgccgccagagagatgggcgccaagcgaccaggaggcaggggggcagt
gacgcccccgtgttcagagcaggacactgctacaaaccagtactcattaccaaccctttg
tttctccacagtgagccccctacacccagacccagcatgtctgtcagtgtcctgtccctt
cctgggctcaggactggcaggcagcaggggctgtttggcttcagtctgcaggccaggtca
gccagcccagctccagaacccgcacctcaaagaagccgcctttgctcgaagtctagcccc
agtcagagttctgttccctgggagcaaccatcggagggctgggcgttcgggcccctgtgc
tctgtggaggctgtagaactgcagcaggagctggagcccaaactggaggcccagttccca
gggttgggcaggctgctggagtggatggtgcgctgggctgataagagggtgttgctggga
caacccagccggatgaaggagagggaggcgggcggaggagaggtagctggaggtggggtg
gttactcgggtcaaagcctcggctcctgcggtgctcacggccctcagcatgttggagcac
aggtacaccgccgccctgctaggcatggaccactacagcgcaaacttacaggttccagag
aggcagtggacagtggctccagtgttgcagcctgaggtgggctggaagctggagagggag
agcagtgtggatacaggttaccctgcatcagctggcacacccattactctgccagaccag
gatccccaacactgcgaactgtcctatggctcacagactgagggggtggaacgagtgaca
tcccaagagacctcacagctttctgaccctgtgggagtaaacttaaaccctgagagtggg
gtggcagacctcccagacaacaagtgtgacctttctgctgaaaaaggagaggacagcaat
gctgacgaggccttgaggtcatcagcctctctcgccatcctcaacatctctgtccacatc
aagagcctccgtccaacactgagcccacccggccaggcattaacgctggcagatctacgg
tgctcagagagggaagagaacattgtcagctctcaagagggggaggcagagaatctgctg
tctcatggctccctgagaagaccatcagatattactgaagaagtgacaagaaatataact
ctgagtgagggttcaggatcagacggccctcctaatgccagcttccaaccccttcccggg
gcagggcctcaggctggggctcaggtagcagactctgcccctaacggcggactgccccag
gggagcaccaatacgacccctgcccctgcctctgctcccaaccagacccttcctgcccag
acagaccctgtcagacagctcttgcaggatgagctattcagactggtccagttgcagcag
atcaacttcatgagtttgatgcaggtggtcggagcgtcgtttgtcaacttcccagtgtca
cagaacaacacactcccggcccagtccaatgtgccctatccacaccccaatacgcctctg
tcccaccctaacactctcctccctcacctgaatctgaccccctcccagaacaacatgtcc
cctatgcctcagacccagagctcggttcaggcccctctagcctcggagcccctgtctggg
ggacacggacccacagaccaaccccccatccacgaaatgcagccattggccgtccaccct
gagccattgagagatatccaggggcagaccaggacattgatctcatcctctcatgggttt
cagaccactgtggaccccacctgcagtgcccctctgctactgccctttggtggtagttca
caggtttctgctccctacagctcaggactgaagctgcttcagctgcaccctcccctgctg
tccctccagcggcatggtaaaacggcccctgtacgtgaggcctggggacccccgtctgag
aggagacccagcactgccgtgcccccccacctgaaccccagccagtatgacccagccgct
ctggggagggcagaggagagatcgagggaggcagagagagagtccaccgcgccaccatca
cacctcaatctgacacagtatgcccactatccctccaaccaggcccccaggaacacactg
cccccgctccagaatccagagaccagggtggagaggtccagaggggctgagccccgtcac
ctgcctcctacccttccatcccacagacctccccctgtccacggactccccctcctccgc
ttccaccctgacccacgcccccctacgaccttcgctctcataccactcccacactcctcc
aggcccctgactgtcaccccagcagccatgggccacaaccccagactacagctactccag
agggacccagaccctcctaggatgatgctgcccgaagccacccctccggcctgcgtgcca
catctcatccctctgggggagctgatgggctgggctgcagggagacagaggggggcagag
gccagactccaactcctcagagtggacccacaggcacagaaccctacccctgcaacaccc
tccaccagcaccatttccagcaggaggcagaagagacgagtggacaggttgaggagagag
ggagagaaagcagaggtcacatttagaccggaggactccatcatactcccgctagagtgc
aatgaggacgagcctgcagagcctgttcttggggagggctatgtcttccctcttgggaca
tttgactccgtgctgactggtcagggattggtggacaaggcactgtctactgcagctgag
ctccatgcctttgcctctacacacaagaggcctcctgagagccacgatgcctgcaccaac
acagacccagcttctcctcactcagatacaggaatttctgcccaacctactgtcacgtct
gctgcttctggacctgctgctctccctcctgaattgttcctgaatctgcggttccctaga
gaccctcctgtccacgacacagagacatcgggggagaaacgacccgagagaaacacgggt
cgtcagttcatacatgtgatagatctggaggatggggccctgctacaggagttgccatcg
tgcccccgccctgcggtgcgggaccatgacgtcaccccgtctcagccctctccccccacc
tcagcacagctccacctgctggcagcctccgtcaccaactcagccccttcggaactcact
gcagacaccagcacagaggacgaccaaccccaagctcagccaagtggtctgagtcaatgc
ttctctgtagcgtccctcccacctgcccaccctgagcccagtggagacccagtgactcgc
agtctgctgcaggagaggagagccccaggccgctccctggagacccatcgcggagctcca
tccagggccccagtgatccaggtggctgcccgtctgtctgagatggacgcccagctagct
gccttgcagaacattgcagatcacatggagagagagtttgccaataccagactgctggtg
agcaccattgagactctgcgtcctgccatggctcctgaaagggtggagggaagaacacca
gtgaacaagacagtgactctggccgtctcaccagaagggtggcgatcacgcctgtccgtg
caccatgaccctgagctagcgggactttgccaggaagaggaggagcaggaggaaggacct
gatagtgtcgtagtcagctctgctccttggggtgtgaaacagccctcctctctttctcct
cacgctcatgccgtccagagcacctcgaccctgcaccagcccacacccacaggcctgtgg
ttgtctcccgtcagaccagaaccagagcagcgtgtgtgggacatgggtcaagatttaaca
gacactatggatggagcacctggaacatgggcagaggagactctgggtctcagtgggctg
agtgatgtggcagacatcttgacggagttggtgagggggggaggcatctcccccacggcc
ctggggctgtcgcacacccaagctgcccgcctcaacagcaggctgaaccagcaacagagc
ggcagggcgggacagaggggcatgcgagcagaggaggagaggcgagagctgagggtttgg
atgagaaggaaacagagggagaaactggtcgagtaccgcagacagagggaggagaagagg
gagagggaacgcaaacccttctcaaccccagtcacactgaaaccaacgtccaaagatata
aacatcaataagaaaatcaaggaagagaaagacaagacggttctgctggagcaccacaat
cagcgggcccgcgatgcctgtagtctgatcacagacctcctcaccaccccactgaccctg
cccactaacgccaaccgtaccctgaacctaccctccacctcctcacgaccctcttccaca
cgaccccttacagctcagactgtcggcagcacccgcagcagccccagaggtcgtagtctc
tctgttggggggaggaggaggaccagtaccaaaccccagactgggagagcccgctccctc
tcctctccaggggtgacaccacgttcagaaagacggcctgcgtcatcaggggggcaggag
acactgacttccagattgggactgcacagaccagcgagttttctgccaggggatcgtctc
tcccacgtgacccggcggggtatgatcacagacctgaggggcaggactgggactgggccg
atgacacccagccagcaagagtggagaagagaagtgatccagtcgtcatctggacggaga
ggtggaggagcaagggagcagagagagactgaagagagggaggaggaggtggtgagccca
tggaacccccctccagagatctgcaggttgctggggctggagaactcagagggccagggt
ggtgtggtggctagagctgggggagcagggctggacagacttgataccctgtcagagagc
actggcagcatcctcagcaaactggactgggctgccattgaaagcattgtggcctcggaa
ggggccatctga
DBGET
integrated database retrieval system
