Oncorhynchus mykiss (rainbow trout): 110525328
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Entry
110525328 CDS
T07259
Symbol
traf1
Name
(RefSeq) TNF receptor-associated factor 1 isoform X1
KO
K03172
TNF receptor-associated factor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110525328 (traf1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
TRAF2_zf
zf-TRAF
TRAF3_RING
zf-C3HC4
YtxC
zf-RING_UBOX
DUF8246
DUF1664
Motif
Other DBs
NCBI-GeneID:
110525328
NCBI-ProteinID:
XP_021461028
Ensembl:
ENSOMYG00000001227
LinkDB
All DBs
Position
6:16970834..16982251
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AA seq
570 aa
AA seq
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MESSLKPTGNLHNDPSAPGENEYPSGFPQSICDDVPQQKYLCSNCNNVLNEARQTLCGHR
YCLACVSWLVSNNNNLVCKMCKEEDPSSESETSILTSDNLFSDAAINKEILELKVHCANQ
GCSWRSILKDFEEHQGQCEYALIPCNIGCGHMVLRKALACHLEKACPNNMSVCPACCHSL
RPIELQTHSCHSLGEEKADKKQRKGKSNPLPGTKGKEYCVFSEVGCTFKGTTEKLRVHEN
SSHVGHLQLLLRAATTTSSDLQASPLTAPAPGKENRAMDEQLPHLRDTLSGLRLHWDMGL
LKGEGELETEGGDGRNSSAAHSLRDDDQVTILLDLGRQIDTLQQRVQISENIISVLNREV
EKTQLSMKAVERENQSNQEMIYHLEIKVTEQEHRMARKDLVISSMKQCLSAHQEVSYDGT
FIWRLSDLSNKMKEAVSSHGNRPNLYSPAFYTARYGFKVCMRLYLNGDGVGKGTHISLFF
VIMKGEYDLLLSWPFKHKVTFFLLDQNHREHVIDAFRPDLTSSSFQRPVSDMNVASGCPL
FFPLGKLHSPKHAYLKDDTIFIKCVVDTSS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggagtctagtttaaaaccgactggcaacttacacaatgatccatctgcaccaggtgaa
aatgagtatccttctggatttcctcaaagtatttgcgatgatgtaccccagcagaagtac
ctgtgcagcaactgtaataacgtactgaatgaggcacgtcagactttgtgcggccaccgc
tactgcctcgcttgtgtcagttggttagtgagtaataacaacaaccttgtttgcaagatg
tgcaaagaagaagatccaagctcagagagtgaaacaagcatactgacatcagacaattta
ttcagtgatgcagccatcaataaggagatcttggagttgaaagtgcattgtgctaaccaa
ggttgctcctggaggagtattctcaaggactttgaggagcaccaggggcagtgtgagtat
gccctaatcccctgcaacataggctgtggtcacatggtgctgcgaaaggccttggcctgt
cacctggagaaggcctgtccaaacaacatgtcagtgtgccctgcatgctgccactctttg
cgccccatagagctacagacacactcatgtcacagtcttggagaggaaaaagcggataaa
aaacaaagaaagggaaagagtaatcctcttccaggtaccaaggggaaagagtattgtgtt
ttctctgaagttggttgcacatttaaggggaccacagagaagctgagagtgcatgagaac
agcagccatgttggccaccttcagctcctgctgcgtgctgccaccaccaccagcagtgac
ctgcaggcctccccactaacagcccctgccccaggcaaggagaacagggctatggatgag
cagctgccccatctcagagacactctgtctggcctgagactccattgggacatgggacta
ttaaagggggaaggggagctggagacggaaggaggggacggaaggaatagctcggcagct
cacagcctgcgagatgatgaccaggtgaccatactcttggacctagggcggcagatagac
acactgcagcagagggtccagatatctgagaacatcatctccgtcctgaacagggaggtg
gagaagacccagctgagcatgaaggctgtggagagggagaaccagagcaaccaggaaatg
atttatcacttagaaataaaggtgacagagcaggagcatagaatggccaggaaagatctg
gtcatcagctccatgaaacaatgtctcagcgcccaccaggaggtctcttatgacggcacc
ttcatctggaggctgtctgacctcagcaacaaaatgaaggaggccgtctctagccatggg
aatagaccaaacctgtactctccagcgttctacacagccaggtatggattcaaggtgtgc
atgaggctgtacctgaatggtgacggggtgggaaaaggcactcatatctctcttttcttt
gtgatcatgaaaggggagtatgacctactcctctcatggccattcaagcacaaggtcacc
ttcttcctgcttgatcagaatcacagagaacacgtgattgacgccttccggcccgatcta
acctcctcatccttccaaaggcctgtctctgatatgaatgtggccagtggttgcccactt
ttctttcctcttggtaaacttcactcgcctaagcatgcctacttgaaagacgacacaatc
ttcatcaagtgtgttgttgacacttcatcctga
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