Oncorhynchus mykiss (rainbow trout): 110525908
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Entry
110525908 CDS
T07259
Symbol
traf2a
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04137
Mitophagy - animal
omy04141
Protein processing in endoplasmic reticulum
omy04210
Apoptosis
omy04217
Necroptosis
omy04621
NOD-like receptor signaling pathway
omy04622
RIG-I-like receptor signaling pathway
omy04920
Adipocytokine signaling pathway
omy05132
Salmonella infection
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110525908 (traf2a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110525908 (traf2a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110525908 (traf2a)
09143 Cell growth and death
04210 Apoptosis
110525908 (traf2a)
04217 Necroptosis
110525908 (traf2a)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110525908 (traf2a)
04622 RIG-I-like receptor signaling pathway
110525908 (traf2a)
09152 Endocrine system
04920 Adipocytokine signaling pathway
110525908 (traf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110525908 (traf2a)
09171 Infectious disease: bacterial
05132 Salmonella infection
110525908 (traf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110525908 (traf2a)
04121 Ubiquitin system [BR:
omy04121
]
110525908 (traf2a)
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110525908 (traf2a)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110525908 (traf2a)
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
110525908 (traf2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-RING_4
zf-C3HC4_2
zf-C3HC4_4
Sina_ZnF
zf-RING_6
zf-RING_5
ATG16
CCDC39
Zn_ribbon_ACC
MATH
EFL1
Par-4_C
CEP128
Motif
Other DBs
NCBI-GeneID:
110525908
NCBI-ProteinID:
XP_021462083
Ensembl:
ENSOMYG00000020606
LinkDB
All DBs
Position
6:38668479..38683603
Genome browser
AA seq
576 aa
AA seq
DB search
MAAQEPSPPSSLEGNKPGFPKKILANNLEEKHMCNSCLKILRRPLQAQCGHRFCSFCFNK
IVSSGPHKCSACIKEDLFEDPTSILKEGGAFPDNAARREVEALAAVCPNEGCTWTGNIKE
YEVNHEGKCDFMIILCPSCKELMRTNELERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRAPCRFHVVGCDMSVEKEKTHDHERACS
YEHLNLLLHFIMGIKVSLESLQPQSLELAGHKIHELHRALRELELKLGQLTLGGGAPVQG
ACAPTLPTLALPALATSFTPLPSAVGAALELQLHSEKTKVAELSRRCQELELKVGTFENI
VCVLNREMERSSTTIEAYNRQHRLDQDKVEILNNKVRQLERTVGLRDLSIVEMEGNIREM
SAATFDGIFVWKISDFTKKRQDAVAGRAPAMFSPAFFTSKYGYKMCLRIYLNGDGTGRAS
HLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNI
ASGCPLFCPLPKLDTKNSYIRDDTIFIKAIVDLTGL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaagagccatcaccaccatcttcactggaaggcaacaaaccagggttccct
aagaaaattttggcgaacaacctcgaagaaaaacacatgtgcaattcttgtttgaaaata
ttgagaaggcctctacaagcccaatgtggccatcgtttttgttcattctgtttcaacaaa
attgttagttctggaccacataaatgcagtgcttgcatcaaagaggacttgtttgaggac
cccacatctattcttaaagaaggcggtgcttttcctgacaatgcagcgcggagagaagtg
gaagcattggcagctgtttgtccaaatgaaggatgcacttggacgggcaatatcaaagaa
tatgaggtgaaccacgagggaaagtgtgacttcatgatcattctctgtccctcctgtaaa
gaactcatgagaaccaatgagctggagcgccacaacgaacgggaatgtcctgagaggact
ttaaactgcaaatactgcaaagaacctttccatttcaagaacatcaaggctcatgatgag
atctgtccaaagtaccctatgatttgtgaaggctgcgcaaagaaaaagattcccagagaa
aagtatgtggaccacatcaagttctgcagtaaattcagagcaccttgcagatttcacgtc
gttggctgtgatatgtctgtggagaaggagaagacccatgaccatgagcgtgcatgttcc
tacgaacacttaaatctactcttgcatttcatcatgggcatcaaggtgagcctggagagc
ttgcagccccagagcctggagctcgcaggtcacaagatccatgagctgcaccgggccttg
agagagctggagctgaagctgggacagctgactctgggtgggggagcccccgtgcaggga
gcctgtgcccctaccctccctaccctggccctccctgccctggccacctcctttaccccc
ctgcccagtgcggtgggcgccgccctggagctgcagctccacagtgagaagaccaaggtg
gcagagctgagccggcggtgccaggaactggagctgaaagtgggcaccttcgagaacatt
gtctgtgtcctcaaccgagagatggagcgctcctccaccaccatcgaggcctacaaccgc
cagcatcgcctggaccaggacaaggtggagatcctcaataacaaggtgcgtcagctggag
agaactgtgggcctgagagacctgtccattgtggagatggaggggaatattcgggaaatg
tctgcagctacgtttgatggtatctttgtctggaaaatctctgatttcacaaagaaaaga
caggatgctgttgctggcagagccccagctatgttctccccagcatttttcaccagcaaa
tatggctacaagatgtgcctacggatttatctgaatggggacgggacgggacgggccagt
cacttgtctctgttcttcgtggtgatgaggggacacagtgacgccctcctcaagtggccc
ttcaaccagaaggtgaccctgatgctgctggatcagaataaccgagagcacatcatcgat
gccttccgtcccgacatctcctcctcctccttccagaggcccgtcagtgacatgaacatc
gccagcggctgcccactcttctgccctcttcccaaactggacaccaaaaactcctacata
cgagatgatactatattcatcaaggctattgttgacctcactggcctctag
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integrated database retrieval system
