KEGG   Oncorhynchus mykiss (rainbow trout): 110525919
Entry
110525919         CDS       T07259                                 
Symbol
ercc6l2
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:omy03400]
    110525919 (ercc6l2)
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    110525919 (ercc6l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 ERCC3_RAD25_C VIGSSK
Other DBs
NCBI-GeneID: 110525919
NCBI-ProteinID: XP_021462108
Ensembl: ENSOMYG00000024587
UniProt: A0A8C7RKY1
LinkDB
Position
6:complement(39090231..39106621)
AA seq 1581 aa
MMASTSTADIKVWHEGDRCLAPSLRDGTLLREGTIQKLPSTSHGEDMALVKFTEQHDEDE
EEEAVFPVCKLQRPDANQSSTSVVSAQEKPLFLCSQTPPGPSEPLVLSQSGVAVPYTINR
YLRYYQKEGIQFIYDNYAQSRGCILGDDMGLGKTIQVIGFLAAVLGKTGTWEDIENNRPQ
FLLTQIPTQRSKPRKVFLIVAPLSVLYNWKEELETWGHFLTVVVHGLRKEEELARIRRGR
SEIALTTYETLRLYLEQFNSIDWSAVIVDEAHKIKNPNSQITGAMKDLRCPVRVGLTGTI
LQNNLDELWCVMDWAIPRCLGSLGNFKNMFSDPIELGQKHSVTKRALATGRRAVRALAAK
LSHWFLRRTKALIREQLPKKDDRVVYCSLTSFQQTVYQAVLDTEDVTLLLRSSEKCDCHS
GHSRRKCCYKVNARGVRVTDLYFSYLAILRKVANHVALLQSKWNTSKKQEQYVNEICEKV
FQKFPDFTEKCKQAAFEAMSDPMYSGKMKVLQRLLKHYTQRKDKVLLFSLSTKLLDVLES
YCMADGLEYSRLDGNTKPRERLKIVKEFNSCPDINLCLVSTMAGGLGLNFVGANIVVLFD
PTWNPANDLQAIDRAYRIGQCRDVKVFRLISLGTVEEVIYLRQVYKQQLQSSVMGKESAR
RYFDAVQGSDDQKGELFGIQNLFRLQTQGTCLTRRILEREGRVEVGVMTSSTHTGEEEER
KSESEAGEVSARDHCELGNGGAIGSVGPSRIPRATTRGVLDFSSGSEEEGEQGGRSKVEK
ANTTLPGRLSLLQHGFSRLLQRSGVRAGSGSESGEHSQSEGGRSDSEEDSDEDTSAMAPK
GLSTAGSGGPQTPTLAPKGGNHLDAAPLKNDWDVSSGSEREEERNGGRWDGQRGRDHDPV
TLSGESDDMGRKIPNLKQGIRRKRRVEEDSDDDSPPSSGSKRSNTKTPVSRMHQVVFDSE
SEDIDIEELIRPCAQTHVLKRPPAHLRRREMGRDGGSKRETSNRPVDQSRRTRQAEDIET
FTSSDENHTPVERVRSVTAPQNHNHGPGPQTDQHGARAFTGLKNPKVNQTVPSAKGPPCG
TIDNVLGGVREVVYTHSNQHMVGGSKAEERISRAALRDVFERRRFSQLPANELRDTQKTQ
PEHTPPFHTSHNDVGWVGAVHRPSVDHPVTHTIRSVHHPTQHTTVIIGETPGTIRRQQLE
EMACVLGPVSLRQFAEEVLRSTSAQRLAQLRQYYTDQGPEVASTIRENFAEPHTAKPKVD
RTTPSSSSTTKHRPNSKRNQRVALEPQAEPRTRHRSVPEPQRDVPSSEEQRVRNARGGKK
KSGNSGMSRAAQCSSSDLDNSRSSPLGPGASRAQPVSSSSSSSALSHPQAKPTASPPRGR
SSLLSSPRKSEVVGRQRYRAQPSSPPSQQVLLTELLGDTSILDDLLRPRSKASSEPQTGF
PKTPTSQAVFTPTSHSATPASCHPTTPPKPPSTPHPRPLTKSVPGPSSSTTRPSRSITTP
LTHPITPLFSPAPERSKNSHRDFWDILEEGNEERINKLTDLSEVERVCESASVRARGGTG
GGEEKGNTSLWKRNDKFLWKK
NT seq 4746 nt   +upstreamnt  +downstreamnt
atgatggcttcaacttccacagctgacataaaagtgtggcatgagggcgacagatgcctc
gctcccagcctcagagatggcaccctactacgagaggggacaatccagaaactcccttcc
acttctcatggtgaggacatggcattggtgaagttcacagagcaacatgatgaagatgaa
gaagaggaggcagtctttccagtctgtaaactccagagaccagacgcaaaccagtcgtcc
accagtgtagtgtctgcccaggagaagcctctattcctctgcagccagacaccccccggg
ccatcagagcccttggtgttgtcacagagtggtgtggcagtcccatacaccatcaacagg
tacctgaggtactaccagaaggaagggatccagttcatctatgacaactatgcccagtcg
agaggatgtatcctgggagatgacatgggtctgggcaagaccattcaggtcattggtttc
ctggctgctgtgctgggtaaaacagggacatgggaagacattgagaacaacaggcctcag
tttcttcttactcagatccccacacagcgaagcaaaccccgaaaggtgttcttgattgtg
gcccctctgtcggtgctgtacaactggaaagaggagctggagacgtggggtcacttcctg
accgttgtagtccacggtctgaggaaagaggaggagctggctcgcatccggaggggacgc
tctgagatcgccctcaccacctacgagaccctacgcctctatctggagcagtttaacagc
attgactggtctgctgtgatagtggacgaggcccacaagatcaagaaccccaactcccag
atcactggggcaatgaaggatctgaggtgtccggtcagagttggcctcactggcacaatc
ctgcagaacaacctggacgagctctggtgtgtcatggactgggccatccctcgttgcctt
ggcagcctgggtaacttcaagaatatgttttcggaccccatcgaactggggcagaagcac
agcgtaactaagcgggccctagcgacgggcaggagggcggtccgggccctggctgcgaag
ctctcccattggtttctccggaggaccaaggctcttattagagagcagctgcccaaaaaa
gacgacagggtggtgtactgttcgctgacgtcgttccagcagactgtgtaccaggcggta
ctggacacggaggacgtcaccctgctcttgcgctcctcagagaagtgtgactgtcacagt
ggacactcccgcaggaagtgctgctacaaggtgaatgctcggggtgtgcgtgtgacagac
ctgtacttcagttacttggccattctcaggaaggtggccaaccacgtggctttgctgcaa
tccaagtggaacaccagcaaaaagcaggagcagtatgtgaatgagatctgtgagaaggtg
ttccagaagtttcctgacttcacagagaaatgcaagcaggcagcatttgaggccatgtca
gaccccatgtacagcggaaagatgaaggttctccagaggttgttgaaacattacacgcag
agaaaagacaaagtgctattattctccctctccactaagttgctggacgtgctggagagc
tactgcatggcagatgggctggagtatagcagattggatggcaacaccaagcccagagag
aggctgaagatcgtcaaagagttcaacagctgccctgacattaacctctgccttgtctcc
accatggcagggggtctgggcctgaactttgtgggggccaacattgtggtcctgtttgat
cccacctggaaccctgccaatgacctgcaggcaattgacagggcgtatcgtataggccag
tgcagggacgtgaaagtgttcagactcatctctctgggaacagtggaggaggtcatctac
ctgcgccaggtctacaaacagcagttgcagtcttctgtgatgggtaaggagagtgcccgg
cggtactttgatgcagtgcaggggtccgacgaccagaagggggagctgtttgggatacag
aacctcttcaggctgcagacccaggggacctgcctcaccaggagaatactggagcgggag
ggacgagtggaggtaggagtaatgacgtccagcacccacacaggggaagaggaggagagg
aagagcgagagcgaggctggggaggtttccgcaagggaccactgtgaactgggcaatgga
ggggcgattggcagtgtagggccctcgaggatccccagggcaacaaccaggggggtgctg
gacttcagcagtggcagtgaggaggagggggaacaggggggcaggagtaaggtggagaag
gcgaacactacccttcctggccgactcagtctccttcagcatggcttctccaggttgctc
cagaggtcaggggtcagggctggatcagggtcagaatcaggggagcatagccagagtgag
gggggaaggagtgattctgaggaggacagtgatgaagacacttctgctatggcaccaaag
ggcctcagcaccgcagggagtggaggcccccagacccctacattggcccccaagggtggg
aaccacttggatgcagctcctctgaagaacgactgggacgtctccagtggctctgagaga
gaggaagaaaggaatggagggagatgggatggacagagggggcgagaccatgatcctgtt
acactgtcaggagagagtgatgacatggggagaaaaataccaaatctgaaacaaggaata
aggaggaagaggagggtggaggaggacagtgatgatgattcacccccctccagtggaagc
aaacgatctaacactaaaactccagtttccagaatgcaccaggtggtgtttgactctgag
tctgaggacatagacattgaggagctaatcagaccttgtgcacaaactcatgtgcttaag
agacccccagcacacctgaggaggagggagatggggagagatggtggtagtaagagagag
accagcaacagaccagtagaccagagtagaagaaccagacaagcagaggacattgagact
tttacctcctcagacgaaaaccacactccagtcgaaagagtccgatctgttacagcccca
cagaaccacaatcatggcccaggcccacagacagaccaacacggagcgagggcgtttaca
ggtctgaaaaacccaaaagtgaaccagactgtcccttctgccaaaggaccgccctgtgga
acgattgacaatgtgttaggtggtgtacgggaggtggtttacacccactctaaccaacat
atggtgggcgggagcaaggccgaggagcgaatcagcagagccgctctcagagacgtgttt
gagcgcaggaggttctcccagcttccagccaatgaactccgggacacacagaagacccag
cctgaacacactccaccattccatacttcccataatgatgttggttgggtgggagcagtg
cacagacccagtgtggaccacccagtcacacacaccatcaggagcgtccaccaccccacc
caacacaccaccgtcattatcggagagacccccggaaccatccgaaggcagcagctggag
gagatggcgtgtgtacttggacctgtttcattgagacagtttgctgaggaggttctgagg
agtacctctgcccagagactggctcagctacgacagtactacactgaccagggccctgag
gtggcttccaccatcagggagaacttcgctgaaccacacacagcaaagcccaaagttgac
aggacaaccccttcctcctcctctacaaccaaacacagacccaactccaaaaggaaccag
agagttgctctagaaccccaagcagaacctagaacccgacataggtccgttccagaaccc
cagagggatgttccctcttctgaggagcagagggtccggaacgccagaggagggaagaag
aagagtggtaatagtggaatgtccagagctgctcagtgctccagctcagacctggacaat
agtaggagtagtcctctgggaccaggggcctctagagctcaacccgtttcctcctcctcc
tcttcttcagctctcagccatccccaggctaagcccacagccagccctccgagagggagg
agcagcctgctgtcctcccccaggaagagtgaggttgtggggaggcagcggtacagagct
cagccttcctctccccccagccagcaggtcctcctcacagagctgctaggagacacctcc
atcctggacgacctgctgcgacccagaagcaaggcctcctcagagcctcagacgggcttc
ccaaaaacccctacttcacaggctgtctttacacccacttctcactctgccacacctgcc
tcctgtcaccctacaacgcctcccaaaccgcccagcacaccccaccctcggcccctgaca
aaatccgtcccaggcccttcttctagtactactcgtccctctcgatccatcaccacaccc
ctcacacaccccattacaccacttttctctccagcccctgagaggtcaaagaacagccac
agagacttctgggacattttggaggagggtaacgaggagaggatcaacaaactgacggac
ctgtcggaggtagagagggtgtgtgagagtgctagcgtcagggccagaggaggaacaggg
ggaggagaggagaaagggaacacgtcactttggaagaggaacgacaagttcctgtggaag
aagtga

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