Oncorhynchus mykiss (rainbow trout): 110526614
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Entry
110526614 CDS
T07259
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
110526614
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110526614
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
110526614
Peptidases and inhibitors [BR:
omy01002
]
Metallo peptidases
Family M10
110526614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
DUF4953
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
110526614
NCBI-ProteinID:
XP_021463403
Ensembl:
ENSOMYG00000043784
LinkDB
All DBs
Position
6:77814380..77847797
Genome browser
AA seq
659 aa
AA seq
DB search
MGCQTAFSPRHLVLKVFLVQLIAFLQKTSAAPSPIIKFPGDDSPKTDKEVALHYLNKFYG
CPQDRCNLMVLKDTLKKMQKFFSLQETGEIDPKTVEIMKKPRCGVPDVAQYNFFHRKPKW
QQNAITYRILGHSPDLDEETIDDAFLRAFKVWSDVTPLKFTRLMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGTGGDSHFDDDEQWTLGEGQVVKVKFGNAEGEFCKFPFMF
MGKEYNSCTNQGRDDGFLWCSTTYNFDDDGKYGFCPHELLFTLGGNADGAPCKFPFTFQG
ENYDGCTTQGRDDGYRWCATTENYDNDKSYGFCPETAMSTVGGNSEGSPCVFPFTFLGDT
YDSCTASGRSDGKMWCASTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPMYTFTKNFRLSNDDIKGIQELYGTGTDKPVPPTQGPVTPMDICNEPVVFDAVAQIR
GETFFFKDRFIFRSTNFRGKPSGPMLVATYWPELPVTIDAAYENPLEEKTVFFAGNEMWI
FNADQIEKGYPKRISSIGLPTDLKGIDAAFSFGKSQKTYLFAGDQFWRYNEAKKKMDPGF
PKLIADSWNGIPDGIDSAFSLNGIDYTYFFKGAHYFKMDDSSLKIVKLGEITKDWLGCH
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggggtgccagacggcatttagcccccgacaccttgtcctcaaagtgtttttggtacag
ttaatcgcctttctccagaaaacctctgcagccccctcgcccattatcaagttcccagga
gacgatagtccaaaaacagacaaagaagtggctctgcactatctgaacaagttctatggc
tgcccacaagacagatgtaatctcatggtgctgaaagacaccctgaagaagatgcagaag
ttcttctctctgcaagagacgggcgagatcgaccccaagacagtggagatcatgaagaag
ccccgctgtggagttcctgatgttgcccaatacaacttcttccacaggaaacccaagtgg
cagcaaaacgccatcacctacaggattctaggccactctcctgacctggacgaggagact
attgatgacgccttcttaagggccttcaaagtctggagtgacgtcaccccactcaagttc
acccgcctcatggatggagaggctgacatcatgattaactttggccgcaacgagcatggt
gatggctaccccttcgatggtaaagatggtctgctggctcatgccttcgctcctggacca
ggcaccggaggagactcccactttgatgacgacgagcagtggacactgggagaaggacaa
gttgtgaaggtgaagtttggtaatgcagagggggagttctgtaagttccccttcatgttt
atggggaaggagtacaacagctgtaccaatcagggccgtgatgatggattcctctggtgc
tccaccacatacaactttgacgacgacggcaaatacggtttctgtccccatgagttgctg
ttcaccctgggtggaaacgcggacggagctccctgtaagttccccttcacgttccaaggg
gagaactatgatggttgcaccactcaggggcgtgacgacggctaccgctggtgtgctacg
actgagaactatgacaatgacaagtcctacgggttctgccctgaaacagccatgtccacc
gttggaggaaactctgagggttccccctgtgtgttccccttcacgttccttggagacact
tatgacagttgcactgcttctggacgtagcgacggtaagatgtggtgcgcctccaccaag
agctacgacgacgaccgcaagtggggcttctgtcctgatcaaggctacagtctgttcctg
gttgcggcccatgagtttggccacgccctgggcttggaacactcccaggaccctggtgct
ctgatggcccccatgtacaccttcaccaagaactttagactgtccaacgacgacatcaag
ggcatccaggagctctatggtactggtacagacaagcctgtgcctcccacccagggccca
gtcactcctatggacatctgtaatgaacctgtggtgtttgatgctgtggcccagatcaga
ggagagaccttcttcttcaaggacaggttcatattcaggtcaaccaacttccggggcaag
ccttcaggtcccatgctggtagccacctactggcctgagctcccggtcactatcgacgct
gcctatgagaacccactggaggagaagactgtgttctttgcaggcaatgagatgtggatc
ttcaatgcagaccagatagagaaaggctaccccaagaggatctcctctataggcctgccc
acagacctgaaaggcattgatgcagccttctcctttggaaagagccagaagacctacctg
ttcgctggagaccagttctggaggtacaatgaagccaagaaaaagatggatcctggcttc
cccaagctcatcgctgactcctggaacggaatcccagacggcattgactctgcctttagt
ctgaatggcatcgattacacctacttcttcaaaggtgcccactacttcaaaatggatgac
agtagcctgaagatcgtcaaactgggcgagattacaaaggactggctgggttgtcactaa
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