Oncorhynchus mykiss (rainbow trout): 110530695
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Entry
110530695 CDS
T07259
Symbol
tcf3a
Name
(RefSeq) transcription factor 3a isoform X1
KO
K09063
transcription factor E2-alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110530695 (tcf3a)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
110530695 (tcf3a)
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GFIT
Motif
Pfam:
HLH
SR-25
Motif
Other DBs
NCBI-GeneID:
110530695
NCBI-ProteinID:
XP_036842243
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Position
8:complement(78240675..78278824)
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AA seq
652 aa
AA seq
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MATVGTDKELSDLLDFSAMFAPPVLNGKNRPTTLASSQFGGTGMDERSGSTPWASGEQNS
PSFNQGRGYGEGTHYNEHECLASTPMFGSGIVGKAERGPYSSFGAQPGFMPSEMPMPSPD
ALSPSGLKSGSQFYPSQFNPRRRSTQESMDGQPKKIRKVPPGLPSSVYASASGEDYNRDV
AGYPASKPGNVGYPGSFYMQEGLHPSPDPWSSAGPMGQPGYSAVLGNSPHLGQPAPFTAI
NPQDRLKRQPLPLSPQNYPLHGSEVNGSFHPGSAGYGVPNHTPPINGTDGIMANRGTAPP
SSGDEIGKALASIYPSDHNSNTFPSSPSTPVGSPQAIAGSASQWSRGSGQATPSPNFEGG
LQALQNKMEDRLEEAIHVLQRHAGGQGGPGGLTDMHSLLSAGIGGLAQAFNNAGLGLANR
LPNLMANHHEDSAGPPSSGPGLHGHHGPPSAQPGSQPEGFTSLSRSTHSSSGADIKREDK
EDDENSSVADKSEDEKKDSKARTRTRETFSFQTFSSSLSDTGADSSCSVASPSDDNLTAE
EKEKRERERRSANNVRERVRVRDINEAFRELGRMVQVHLRGDKAQTKLIILQQASQVIMG
LEKQVRERNLNPKAACLKRREEEKVSGVDPQMQMGGGHPGLGGDGHNSVNHM
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtggggacagacaaggagctcagcgacctgctggatttcagcgcgatgttt
gcacctccggtgttgaatgggaagaacaggcccaccactctagccagcagccagttcgga
ggcactggtatggatgagcgaagcggttctaccccctgggcatctggagaacagaacagc
ccttccttcaaccagggacggggttatggtgaaggaactcattacaatgagcacgaatgc
ctggcttccacccctatgttcggctcaggaattgtgggcaaagctgagcgaggaccttac
tcttcttttggagcacagccgggctttatgcccagtgagatgcccatgcccagtcctgat
gccctgtccccctcgggtctgaagtcaggctcccagttctacccctcccagttcaatcct
cgcaggagatccacccaggagagcatggatggccagccaaaaaagatcaggaaagttccc
cctggcctgccctcttcagtttatgcgtcggcctccggagaggactataaccgagacgtt
gcggggtatcctgcctccaagcctgggaacgtgggctaccccggctccttctatatgcaa
gaaggtctgcacccctcccctgacccgtggagttctgccgggccgatggggcagccgggc
tactctgctgtgctgggtaactcccctcacctgggccagcccgcccccttcacggccatc
aacccgcaggacagactgaagcgccagccgttgccactttcgccccagaactaccccctg
cacggcagcgaggtgaacgggagctttcaccctgggtccgctggctacggagtccccaac
cacacaccccccatcaatggaacagacggcatcatggccaaccggggaacagctccacct
agctcaggagatgagatcggcaaagccctggcatcaatttatccttcggaccacaacagc
aacaccttcccttcatctccatcaactccagtgggctctccccaggccatagcaggttct
gcctctcagtggtcccggggctcgggacaggccacaccctctccaaactttgagggagga
ctgcaggctctgcaaaacaaaatggaggaccgtctggaggaggcaatacacgttctgcag
cgccatgccgggggacaggggggcccaggggggctgactgacatgcacagcctcctcagc
gctgggataggaggtcttgcccaggccttcaacaacgctggcctgggactggccaacaga
ctgcccaaccttatggccaaccaccatgaggactctgctggtccgccctctagtggtcct
ggtctgcatggtcaccatggccctccctcagcccagcctggcagccagcctgagggcttc
accagcctctctcgctccacacactcgtccagtggcgccgacatcaaaagggaggacaag
gaggatgacgagaactcctccgtggctgacaagtcagaggacgagaagaaagactcgaag
gctcgcacccgaaccagagagacgttctccttccagaccttctcttcctccctatcagac
acgggagcagacagcagctgcagcgtggcctcgcccagcgacgacaacctgacggcagag
gagaaggagaagcgtgagcgggagcgccgctcggccaacaacgtccgggagagggtgcgc
gtgcgcgacattaacgaggcgttcagggagctgggccggatggtgcaggtgcacctgcgc
ggcgacaaggcccagaccaaactcatcatcctgcagcaggcctcgcaggtcattatgggc
ctggagaagcaggtccgagagcgtaacctgaaccccaaggcagcgtgtctgaagcggagg
gaggaagagaaagtttcgggggtggacccccagatgcagatgggaggggggcaccccggg
ttaggcggcgatggacacaactctgtgaaccatatgtaa
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