Oncorhynchus mykiss (rainbow trout): 110531293
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Entry
110531293 CDS
T07259
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110531293
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110531293
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110531293
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110531293
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
Ank_5
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
110531293
NCBI-ProteinID:
XP_036814235
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All DBs
Position
21:61725825..61804491
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AA seq
1079 aa
AA seq
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MAQLYYKKVSYSPYQDRIPLQIVRAEVDLSAEERAYLTAVEKGDYVGVKHALREAEVYYN
MDVNCLDPLGRSALLIAIENENLEVMELLLDHGVATGDALLYAIRKEVVGAVELLLSHRR
PGGEKQVPSLMMDSQFSEFTPDITPVILAAHTNNYEIIKLLVQRKVTIPRPHQIRCDCVE
CASSSEVDSLRHSRSRLNIYKALASPSLISLSSEDPILTAFRLGWELKELSKVENEFRQE
YEELSQQCKLFAKDLLDQARSSRELETILNHRDDSEELDPRETSHDLAKLKLAIKYQHKE
FVAQPNCQQLLATLWYDGFPGWRRRHWVVKLGTCFIIGLLFPVFSMIYLLAPKSALGVFV
KKPFIKFICHTASYLNFLFLLLLASQHIARTNLHMQGPPPTVVEWMILPWVLGFIWAEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTLIAEA
LFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETKASDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIVPSPKSMWYLCLWVHHRLCRRGAPPADNADKHHNLRKFPEHHADSLIQNQHYQEVIR
SLVKRYVAAMIRSSKTDEGLTEENFKELKQNISSFRYEALDLLGNRRPPRRHYSSSSNAT
LRDEGGTNDEGGPDSNFDPKDPSLVSQEVGGAKRSMGMTFLTPTGSMEKKKQKYGVSSLV
RSISGMEVVSVTKMELEEEEEGWGEEGEQEVDEEKEEEGWGEEEEEEGKPKSNGVRREAV
TSSSSIFPSFPSSSTSSSFARIQRLSVATSNKTPDYFKRLGFLFSRKAPLLPLSVSQSPL
SITISDGLLHPLRGRGSYDLSETQLNQAGHTKPVGATPNSSRRANETDSLLPLPLPPPCP
CQSLHCASNMADSEFHHLDSSESVFEGGGGGRVVGGGSVEPCDVVEESCGTEDSVTTQL
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttgtattataagaaagtgagctactctccttaccaagacagaatcccactg
cagattgtacgggctgaggtggatctctctgctgaggagagggcctacctcactgccgtt
gagaaaggggactatgttggcgtgaagcatgcgctgcgtgaggcggaggtatactacaac
atggatgtgaactgtctggaccctctggggcgaagcgcgctgctcatcgctatcgagaac
gagaacctggaggtgatggaactacttctggaccacggggttgccacgggagacgccctg
ctctacgccatacggaaagaggtggtgggggccgtggagttgctgctgtctcataggaga
cctggtggagagaaacaggtcccatccctgatgatggacagtcagttctcagagtttact
ccagacataactccagtcatcctggcagctcacaccaacaactatgagatcattaaacta
ctggtccagagaaaagtcacaattcccagaccccaccagatacgatgtgactgtgtcgag
tgtgcctccagctcagaggtggacagccttcgtcactccaggtctcgtctgaacatctat
aaggcgctggcctctccctcgctcatctctctctccagtgaagaccccatcctcacggct
ttcagactgggctgggaactcaaagaactcagcaaggtggagaatgagtttcgtcaggaa
tatgaggagctgtctcagcagtgtaagctgtttgctaaagacctgttggaccaggctagg
agcagcagagagctggagactatactgaaccacagagatgacagtgaagaactggaccct
agagagacaagccacgacctggccaaactcaaactggccatcaaataccaacacaaagag
tttgtagcccagcctaactgccagcagctcctagctactctgtggtacgatgggtttcct
ggctggaggaggagacactgggttgtcaaactggggacctgtttcatcataggactgctg
ttccctgtcttctcaatgatctatctcctagcccctaagtctgccttaggtgtgtttgtg
aagaaacccttcatcaagtttatctgtcacacagcatcgtacctgaacttcctcttcctc
ctcctcctcgcctcacaacacatcgccaggactaacctacacatgcagggccctcctcct
actgtggttgaatggatgatactaccctgggtactaggttttatctgggctgagattaag
gagatgtgggatggaggttttacagagtatatacacgactggtggaacctgatggatttt
gctatgaactccctctacctggctactatatcactgaagatagtggcttacgttaagtac
aactcttcccgtcctagagaagagtgggagatgtggcaccctaccctgatagcagaagca
ttgtttgctatagctaatatcttcagttctcttcgactcatctccctgttcacagccaac
tcccacctgggacctctacagatctcactgggacggatgctgctggacatactcaagttc
ctctttatatattgtctggtgttgcttgcgtttgccaacggtctgaatcagctttacttc
tactacgagaccaaggcctcagacgaacccaacaactgcaagggcattcgctgtgagaaa
cagaataacgctttctcaacgttgtttgagactctccagtctctgttctggtccgtcttt
ggcctgttaaacctctatgtgactaacgttaaagctcgtcatgagttcactgagtttgtg
ggggccaccatgttcggaacctataacgtcatctctctggtggttctgctcaacatgttg
atcgccatgatgaacaactcctaccaactcatcgctgaccatgcagatatagagtggaag
tttgcccggaccaagttatggatgagttattttgacgaggggggtactctgccccctccc
ttcaacatcgttcccagtcctaagtcaatgtggtacctctgtctgtgggttcaccatcga
ctctgtaggagaggagcgccccctgctgacaacgcagacaaacaccacaacctacgaaag
ttcccggagcatcatgcagacagcctgatacagaaccagcattatcaggaagtgatccgt
agcctggtgaagaggtacgtggcggccatgatacgcagttccaagacggacgagggactg
acagaggagaactttaaggagttgaagcagaacatctccagtttccgttatgaggcttta
gatctccttggtaaccgtcggcctcccagacgccactactcctccagcagcaacgccaca
ctgagagacgagggaggaaccaatgatgagggggggcccgactctaactttgaccccaaa
gatccttctctggtgtcgcaggaggtgggaggagccaagaggtcaatgggcatgaccttt
ctgaccccgacaggaagcatggagaagaagaaacaaaaatatggcgtctcctctttggtc
cgcagtatttcaggaatggaggtggtttctgtaacgaagatggagttagaggaggaggag
gagggatggggggaggagggagagcaggaggtggacgaagagaaggaggaggagggatgg
ggggaagaggaagaggaggagggtaaaccaaagagcaacggggtgaggagagaagccgtc
acttcctcttcttctatcttcccttcgttcccttcctcctccacctcctcatccttcgct
cgcatccagcggttgtcggtggcgacgtccaataagacgccagactactttaaacgcctc
ggcttcctgttctcacgcaaagccccgctccttcccctctccgtcagccaatcccctctc
tccatcaccatctcagacggcttgctccaccccctgagaggtcgagggtcgtatgacctc
agcgagacgcagcttaaccaggcagggcatactaagccagtcggagccactcctaattcc
tccagacgagcaaatgagacggactctctcctccccttgcccctcccacctccctgcccc
tgccaatccctgcactgtgcttccaatatggcagactctgaattccaccatctggactcc
agcgagagcgtcttcgagggaggaggaggtggcagggtggttggaggggggtcggtggag
ccgtgtgatgtcgtcgaggaatcctgcggcacggaggactctgttactacgcagctgtaa
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