Oncorhynchus mykiss (rainbow trout): 110531703
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Entry
110531703 CDS
T07259
Name
(RefSeq) tumor necrosis factor ligand superfamily member 12
KO
K05474
tumor necrosis factor ligand superfamily member 12
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110531703
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
110531703
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Tumor necrosis fators
110531703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
C1q
Fusion_gly
DUF2681
PM2_P3
DUF5360
Motif
Other DBs
NCBI-GeneID:
110531703
NCBI-ProteinID:
XP_036843426
Ensembl:
ENSOMYG00000003529
UniProt:
A0A8C7M6Y7
LinkDB
All DBs
Position
9:20009183..20020429
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AA seq
253 aa
AA seq
DB search
MIAGECGTTMHRILQRRTVRKLRFVWVFMAMVALSLAACSALFTAWTWRQTLDLSQSVKT
LQDRLEQVNTQRKAIVQLIMEKRELLVGQRVKRDGGTGKGKSGNGKKVASQFEITKESVQ
KVGADGLIKGWTDSEQLNMSKAVKYNTDRGTFTVERAGVYFLYCQVLFNENQSQLVKLEV
AVVKSGQPLQKLQCMEGYGTTPASGSHQFHFLKPCQVSGLLRLEKGAELQAITGAGFSLH
TTGKHYLSLFKVN
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgatagccggggaatgtggaacgaccatgcatcgaattctacagaggagaacagtgcgc
aaacttcgcttcgtctgggtattcatggccatggtggctctgtcgctcgccgcctgtagc
gcactatttacggcgtggacctggagacagacgctggacctgtcccagtccgttaaaact
ctgcaagaccgattggagcaagtgaacactcagcgtaaggccattgtccaactcatcatg
gagaagagagagttgctggttgggcaaagggtgaaaagagatgggggaactgggaaaggg
aagagtggaaatggaaagaaagtggcttctcagtttgagataaccaaagagtctgttcag
aaagtgggagctgatggcttgataaaaggatggacggactcggagcagttgaatatgagc
aaagctgtgaagtacaacacagacagaggcaccttcacagtggagagagctggagtctac
ttcctctactgtcaggtgttgttcaatgagaatcagtctcagctggtgaagttggaagtg
gcggtggtgaagagcggccagccgctgcagaagctgcagtgcatggagggctatggcact
acacctgcatccggatcccaccagttccactttctcaaaccctgccaggtgtctggcctg
ctgcggctagagaagggggcagagctacaggccatcacaggcgccggcttcagcctccac
accacggggaagcactacttaagcctcttcaaggtcaactga
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