Oncorhynchus mykiss (rainbow trout): 110531834
Help
Entry
110531834 CDS
T07259
Name
(RefSeq) transcription factor p65 isoform X1
KO
K04735
transcription factor p65
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04137
Mitophagy - animal
omy04210
Apoptosis
omy04218
Cellular senescence
omy04620
Toll-like receptor signaling pathway
omy04621
NOD-like receptor signaling pathway
omy04622
RIG-I-like receptor signaling pathway
omy04623
Cytosolic DNA-sensing pathway
omy04625
C-type lectin receptor signaling pathway
omy04920
Adipocytokine signaling pathway
omy05132
Salmonella infection
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110531834
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110531834
09143 Cell growth and death
04210 Apoptosis
110531834
04218 Cellular senescence
110531834
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110531834
04621 NOD-like receptor signaling pathway
110531834
04622 RIG-I-like receptor signaling pathway
110531834
04623 Cytosolic DNA-sensing pathway
110531834
04625 C-type lectin receptor signaling pathway
110531834
09152 Endocrine system
04920 Adipocytokine signaling pathway
110531834
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110531834
09171 Infectious disease: bacterial
05132 Salmonella infection
110531834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110531834
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
110531834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
110531834
NCBI-ProteinID:
XP_021470958
Ensembl:
ENSOMYG00000009183
UniProt:
A0A8C7P8F0
LinkDB
All DBs
Position
9:25749902..25758055
Genome browser
AA seq
614 aa
AA seq
DB search
MDGIYGWEQPPLNQGNPFIEIIEQPKQRGMRFRYKCEGRSAGSTPGEKSNDTTKTHPAIK
VHNYNGPLRVRVSLVTKNPPHKPHPHELVGKDCKHGYYEADLQERRVHSFQNLGIQCVKK
KDVAEAVSCRLQTQNNPFNIPEANMWEEFDLNAVRLCFQASITLPTGELCPLEPVVSQPI
YDNRAPNTAELKICRVNRNSGSCIGGDEIFLLCDKVQKEDIEVRFFQGSWEGKGTFSQAD
VHRQVAIVFCTPPYCDTNLTEPIRVKMQLRRPSDREVSEPMDFQFLPSDPDEYRLMEKRK
RTEGMLQNLKLGSLMSGTMPAETRPFNIARRTVTAKPAASQPVMNPVVPPSAFSVKPQPY
YNGPQPGKLFQTQPKSEASSTTAETWKFLNSLTLDSQPKATPVASFTTNPQASASTAASS
QAFPTVNLLDFNGFAFHNFACPQEPVSAAPTPEPTSTFGVQGSQFKVDEELPEFPSFSEA
QAPGTLDSINIEEFQAMLGQSCLAGEGPKSSEASAPQAPCHLPSTNTVANNNAAQNQADP
ANHHTGCGGSTWMNYPNSIVSLLHNEGMMDSSPSNASQPAALDDLDVLSSMDEDRLMSIL
NSGNQYSFVPGHQT
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatttatggatgggaacagccccctttgaaccaaggtaatcccttcattgag
attattgaacagcccaagcagaggggcatgaggttcaggtacaagtgtgaggggcgctct
gctggaagcaccccgggagagaagagcaatgacaccaccaagacacaccccgccattaag
gtgcacaactacaatggccccctgcgtgtccgcgtctcgttggtgaccaagaacccacct
cacaagccccacccccacgaactggtggggaaagactgcaaacatggttactatgaggca
gacctgcaggagagacgagtacacagttttcagaacctgggcattcagtgtgtgaagaaa
aaggatgtggctgaggcagtttcctgtaggctacagacccaaaacaaccccttcaacatt
cctgaggcgaacatgtgggaggagtttgacctaaatgcagtgaggctgtgtttccaggcc
tcgatcactctgcctaccggggaactctgccctctggagcccgtggtgtcccagcccatc
tacgacaacagagcacccaacacagcagaactgaagatctgtcgagtgaacagaaactct
ggaagctgcatagggggggatgagatcttcttactttgtgacaaagtgcaaaaagaggac
atcgaggtgcggttcttccagggctcgtgggaggggaagggcaccttctcccaggcggac
gtacacaggcaggtggccattgtgttctgcaccccgccctactgcgacaccaacctgacc
gagccaatccgagtgaagatgcagctccgcaggccctcggatcgtgaggtcagcgagcca
atggacttccagttcctgccctccgacccagatgaatatagactaatggagaagcgaaaa
cggacagagggaatgttacagaatctgaagctggggtccctgatgtcgggaaccatgcca
gcagagacgaggccgttcaacattgccaggagaacagtcaccgccaagccagcagctagc
cagcctgtgatgaacccagtggtgccccctagtgccttctctgtgaagccccagccctac
tacaacggcccccagccaggcaagttgtttcaaacccagcccaaatcagaagcctcctcc
accacagccgagacctggaagttcctcaacagcctgactctggactcccagcccaaagcc
acccccgtggccagcttcaccaccaacccccaggcctctgcatccacagccgcctcctcg
caggcctttcccaccgtaaacctgttggacttcaacggattcgctttccacaactttgct
tgtccccaggagccggtgagtgcagcccctacaccagagcccacctctaccttcggggtc
caaggctcccagttcaaggtggatgaggagctacctgaattccccagcttttccgaggca
caagcgccagggactctagatagtataaacattgaagaattccaggctatgctgggccag
agttgtctggctggagaagggccaaagagcagtgaggcttcagcccctcaggcaccctgc
cacttaccctccaccaacactgtggccaacaacaacgcggcccagaaccaagcagaccca
gccaaccaccacaccggctgtggcggcagcacctggatgaactaccccaacagcattgtc
agcctgctccacaacgagggcatgatggacagttcccccagcaacgccagccagccggcc
gcccttgacgacctggacgtcttaagctccatggacgaagaccgtctcatgtccatcctg
aacagtggcaaccaatacagttttgtgcccggacatcagacctaa
DBGET
integrated database retrieval system
