Oncorhynchus mykiss (rainbow trout): 110531973
Help
Entry
110531973 CDS
T07259
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
110531973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Motif
Other DBs
NCBI-GeneID:
110531973
NCBI-ProteinID:
XP_021471197
Ensembl:
ENSOMYG00000033458
LinkDB
All DBs
Position
9:35752012..35856104
Genome browser
AA seq
1900 aa
AA seq
DB search
MPPSEKIVVLIFGVLVLESSWNAQHSPWLASALQIQQAFASPNQTNNFVVDEVSRKVYLA
TVNMVYQLNRTLSVEVEKRTGPVEDNLLCHAPQLPQAPCEHPKSLTDNFNKLLELDREQG
VLVVCGSVYQGFCELRKMENISQIAVEFPPQGEKTVFPSMLNIAANHPNASTVGLIFRSH
GGNTRLLVGATYTGVGTTFFPKNHSKEDLRFENTPEIAIRSLNINDLSRLFTYDINPSED
NVFKIKQEVKQKNKLNFVHAFIQKTYSYIAINNDANMGHKESQPNSILARICLDTENPRK
STSESRKLTESFIQMPLQCGYNGNIYNRLVSVHPAEIHSGTGEGLESYLFGVFTKSDRKS
ALCAFRFSDIEEEIRQGRRNCSNSPSSEVQVLDSVIQGSGAACVHKGNLVLQPEQLDCGA
AHLQHPLALQRPLRATPLFESLGLSSVAVDNVHHHTVVFLGTSTGRLRKLTLLKNLTVAN
QWSLKLPAGESVHHIMTFDPIDRNYLYLMTSHHLLRVKVAACSQYRTCSDCLGAGDAHCG
WCTLESRCSIQRECAWGPLARSWIGMGEGPQQCPSMTLTPPEISLSTDIKDVGILINGSV
PDLVGSRVECDYGLGVATAATVHLDYGPAQIQTCPLLPRERYPNIPPGRDHLTVPVAIKV
NGTSVVSGSFVIYDCERTGAIHTKTACISCLSTRWRCYWDQDSHSCLSSKEDSKHSLLEN
ATFCPSLVAENVAPSPSGMTQNFTLFLDNVVQGEELECDFGNEQRYDSRWLEDSSGIKCS
GVTLTTVEKSQVFQLSLRRKGHLDKYIDSPKPVTVEVYNCGVGNGDCSQCWGRENLGHLC
GWCDNSCRPRNDCQYMNSQCPDPEITKISPQSGPLEGGTLLTVQGRNMGRRAEVVEVSIG
MFPCTIIPDQYTVSVELVCVTGQAIDPTKNFVRITVNQKAMAVSKEAFSYLVPKLLSMEP
RKGSRSGGTRVTIKGEHLDTGSQIRVKVNGTQECTILTLTEDTIECTMPAALHTHTEAVS
VCVEFEYIPCQRSELLTQYIYEKNPSISYIKPRQSYLSGGRTITVTGQGFDLVQSVTMEV
LDIGQAACKVQPPSMITCSSPTSSQSQQATVEFFLNGVLYTGDSPIFYGPGQEEEEEPHG
GHFLLEYVEDPQFFTANKEKLIKHHPGEPLTLIINKGPSNLELAPEEYSVMIGSYPCDIS
FHNDQLFHCSINGSLGSSEGELPVTVQVGNFQRIIAKVQLGGSELAIVVSIVVCCVLLLL
CTVALVVYCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNSSQG
IPFLEYKQFVTRTFFPKMCSDYERSLVQPVYENNALGPRALPETHPLLQDWQPSNTAKPN
MEEGITLFSTLLNNKHFLVTFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTSIMKD
LLVDLIDASAAKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIKQQI
NKGSIDAITGKARYTLNEEWLLRENIEAKPQNINVSFQGCGMDSLAVRVMNTDTICQVKD
KILDAFYKNLPFSQWPQAEDVDLEWFASGSNSRILQDLDNTSVMEDGRKKLNTVTHYQIP
EGASFAMSMKDKRDNTLGRAKDLDTEKYVHLVLPHDELFENKKSHRQSHRKKVLPEIYLT
RLLSTKGTLQKFLDDLFQAILSIPAERPPLAIKYFFDFLEEQADKRGITDPDTLHIWKTN
SLPLRFWVNILKNPQFVFDIDKTDHMDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYA
KEIPEYKKRVQCYYKQIQEMAPLSEQEMNAHLAEESRKYRNEFNTNLALTEIYKYAKKYR
NQVVSALESNPTAKRTQLHHKFEQVIALVEDNIYECSSEA
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcggagaagatagttgttctgattttcggcgttctggtgctggaatcgtcc
tggaatgcacaacacagcccatggcttgccagcgcgctacagatccaacaggcgttcgcc
tctccaaaccagaccaataactttgtggtggatgaggtgagtagaaaagtctacctggct
acggtaaacatggtctaccagcttaacaggaccctgagcgtggaggtggagaagagaaca
gggccggtggaggacaacctgctgtgccatgcgccgcagcttccccaagcgccctgcgag
caccccaaatccctcactgacaacttcaacaagctgctcgagctggaccgggagcagggg
gtgctggtggtatgcggctcggtgtaccagggcttctgtgagctcaggaagatggaaaat
atatctcagatagcggtggagtttccccctcagggcgagaagaccgtgttccccagcatg
ctgaatatcgccgcgaaccaccccaacgcttccaccgtggggctcatcttcaggagccat
ggggggaacacccgactcctcgtcggggccacttacaccggcgtcgggaccacgtttttc
cccaagaaccacagcaaggaggacctgcgcttcgagaacacacccgaaatcgccattcgg
tccctgaacatcaatgatttatctaggctgttcacctatgacatcaacccgtccgaggat
aacgtcttcaagatcaaacaggaggtgaagcagaagaataaactaaactttgtccatgcc
ttcattcagaagacctattcttatattgctatcaacaacgacgcgaatatgggccacaag
gagagccagccgaacagcatcctggccaggatatgcctggacaccgagaaccccagaaaa
tccacctcagagagccgtaaactcactgagtccttcatccagatgccgctccagtgtgga
tataacgggaacatctacaaccgtctcgtctccgttcaccccgcggagatccactcgggg
accggagaggggctggagtcgtacctgttcggggtgttcaccaaatcagatagaaagtct
gccctgtgtgcgtttcggttctcagacatcgaggaagagatccgtcagggccggaggaac
tgctccaactcccccagcagcgaggtgcaggtgctggacagcgtcatccagggctcgggc
gcagcgtgcgtacacaaagggaatctggtgctgcaaccggagcagctggactgtggagcg
gcccacctgcagcacccactggccctacaaaggcccttgagggccacacccctgtttgag
tctctgggcctcagctctgttgccgtggacaatgtacatcaccacactgtggtgtttctg
ggcaccagcaccggacgactgcgcaagctgaccctcctgaagaacctgaccgtggccaat
cagtggtctctgaagctaccagccggcgaatcagtgcaccacattatgacctttgacccc
atagacaggaactacctctaccttatgacttctcaccatctcctgagggtaaaggtagca
gcatgtagccagtacagaacatgcagtgactgtctgggggccggcgatgcacactgtggc
tggtgcacactggagagcaggtgttccatccagagggagtgtgcctgggggcctctggcg
cgctcctggatcgggatgggcgaaggtccccagcagtgcccctccatgaccctcaccccc
ccagagatcagcctgtccactgacatcaaggatgtggggattctgataaacggcagtgtc
cctgatctggttggttcgcgggtggaatgtgattatggattgggtgttgccacggcagcc
acggtgcacctggactacggcccagcccagattcagacctgccccctactacctcgggag
aggtaccccaacatcccccctggcagagatcacttgactgttcccgtggcgataaaggtg
aacggcacatccgtggtttccgggagcttcgtcatctatgattgcgagaggacaggagcg
atacacacgaagactgcatgtatcagctgtctgagcaccaggtggaggtgttactgggac
caggacagccactcttgcctctcctctaaagaagactccaaacatagcctgctagagaat
gctactttctgtccaagtcttgtggcagagaatgttgcaccttcgccctcggggatgacc
cagaacttcaccctgttcctagacaacgtggtacagggggaggagctagagtgtgacttt
gggaacgagcagcggtatgattcccgatggctggaggacagctcagggatcaagtgcagt
ggagtgacgctaaccactgtggagaagagtcaggtgtttcagctcagtctgcgtagaaag
ggacacctggacaaatacatcgacagccctaaacccgtgacagtggaggtgtataactgt
ggggtgggcaatggggactgttctcagtgttggggacgtgagaacctgggacatctgtgt
ggctggtgtgacaacagctgtagacccaggaatgactgccagtatatgaatagccagtgt
cctgaccccgagatcaccaagatctccccccagagtgggccgttggagggaggtaccctg
ctcacggtgcagggtaggaacatggggcgcagggctgaggtagtggaggtctccatcggg
atgttcccatgtacaatcattcctgaccaatacactgtctctgtggagctggtgtgtgtt
actgggcaggccattgatcccacaaagaattttgtcagaattactgtgaaccaaaaagca
atggcggtgtccaaagaggccttctcatacttggtccccaagctgctatccatggagcct
agaaagggctctcgttctgggggaaccagggttaccatcaagggggagcacctggacact
ggctcccagatcagagtcaaggtcaatggtacccaggaatgcaccatcctcacgctaact
gaagacaccattgagtgcaccatgcctgcggccctgcacacacacactgaggcggtgtcg
gtgtgtgtggagtttgaatacataccctgtcagcgctctgagctcctcacccagtacatt
tacgagaagaaccccagcatcagctacatcaaacctagacagagctacctcagtggcggt
cggaccatcacagtgacggggcagggttttgacctggttcagagcgtcactatggaggtg
ctagacatcgggcaggcggcctgtaaggtgcagcctccctccatgattacatgctcctcc
cccacctctagccaatctcagcaggccacggtagagttcttcctgaatggagtcctctac
acgggagatagcccaatcttttatggcccaggccaggaggaagaggaggagccacatgga
ggtcacttcctgttggagtacgtggaggaccctcaattcttcaccgccaacaaggagaag
ctgatcaagcaccaccctggggagccactcacactcatcatcaacaaaggaccgagcaat
ctggaactggcgccggaggaatactcagtaatgattggctcctatccctgtgacatcagc
ttccataacgaccagctgttccactgcagcatcaacggctcgctgggctccagtgaagga
gaactgcctgtcaccgtgcaggtgggtaacttccagaggatcatagccaaggtgcagctg
ggtggtagtgagctggccattgtggtgtccatcgtggtgtgctgcgtcctgttgctgctg
tgcactgtggctctggtggtatactgtactaagagccggagggcggagcgctactggcag
aagactctgctgcagatggaggagatggagtcccagatcagagaggagatccgcaaaggc
tttgcagagctgcagacagatatgacagacctgactaaggagctgaacagtagccaggga
atccccttcctggagtacaaacagtttgtcacacgcactttcttccccaagatgtgttca
gactatgagaggagtctggtccagcccgtctatgagaacaacgccctcggtccacgagcc
ctccctgagacacacccccttctgcaggactggcagccctctaacacagccaagcctaac
atggaagagggcataactctcttctccactcttctcaacaacaaacactttctggttacc
ttcgtccacgcgctggagcaacagaaggactttgccgtacgcgacaggtgtagcctggcg
tccttgctcactatcgccctccatggtaaactggagtactacaccagcattatgaaggat
ctgctggtggacctgatcgacgcctcggccgccaagaaccccaagctgatgctgcgacgc
acagagtctgtggtggagaagatgctcaccaactggatgtctatctgcatgtacagctac
ctcaaggagacagtgggcgagcccttcttcctgctactgtgtgccatcaagcagcagatc
aacaagggttctatagacgccatcacagggaaggcccggtacaccctcaacgaggagtgg
ctgctcagagagaacatcgaggccaagccacagaacatcaacgtctcgttccagggctgt
gggatggactctctggccgtgagggtgatgaacacagacaccatctgccaggtgaaggat
aagattctagatgccttctataagaacctgcccttctcgcagtggccccaggcagaggac
gtagacctggaatggtttgcgtctggtagtaacagcaggatcctccaggacctggataac
acttcagtgatggaggatggcaggaagaaactcaacacagtcacgcattaccagatccca
gagggggcgtcgttcgccatgagcatgaaagacaagagagacaacaccctggggagagcc
aaagacttggacacagagaaatatgtccatttggtcctgcctcatgatgagctgtttgag
aataagaagtcccacagacagagtcaccgtaagaaggtcctccctgagatctacctgaca
cgcctcctctccaccaagggaacattgcagaagttcctggacgaccttttccaggccatc
ctcagtattcccgcagagcgtcctccactggccatcaaatacttctttgacttcctggag
gagcaggcagacaagaggggcatcaccgaccccgacaccctgcacatctggaagaccaac
agtttacctttgcgtttctgggtgaacatcctgaagaaccctcagtttgtgtttgacatt
gataagacggatcacatggatgcatgtctgtctgtcatcgcccaggccttcatagacgcc
tgctccatttcagacctgcagctgggcaaggactctcccaccaacaagctgctgtatgcc
aaggagatcccagagtacaagaagagggtgcagtgctactacaagcagatccaggagatg
gcgccactgagcgagcaggagatgaacgcccacttggccgaggagtcacggaaatacaga
aacgagttcaataccaacctggccttgacggagatctacaaatacgccaagaaatacaga
aaccaggtggtgagtgctcttgagtccaaccccacagcgaagcgtactcagctgcaccac
aagtttgagcaggtcattgctctggtggaggacaacatctatgagtgcagcagtgaggcc
tga
DBGET
integrated database retrieval system
