Oncorhynchus mykiss (rainbow trout): 110532406
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Entry
110532406 CDS
T07259
Name
(RefSeq) transcription factor E2F1 isoform X1
KO
K17454
transcription factor E2F1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04110
Cell cycle
omy04137
Mitophagy - animal
omy04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110532406
09143 Cell growth and death
04110 Cell cycle
110532406
04218 Cellular senescence
110532406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110532406
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
110532406
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GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
110532406
NCBI-ProteinID:
XP_036844247
UniProt:
A0A8C7TCR0
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Position
9:55217606..55224372
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AA seq
444 aa
AA seq
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MSEALVSGQTSEDLLADFESLLNAGSIDLSENHQIVIISTPGNVGLNSAVPSNTGEILLF
ATPQGPADVVQDQRRPTLGRPPVKRKLDLDSDHQYVSTSRPPSLGRAPTSTPAPPRVPKP
STEKSRYDTSLNLTTKRFLDLLAQSPDGVVDLNWASQVLEVQKRRIYDITNVLEGIQLIS
KKSKNNIQWLGNHIDGASVSRYQDLQKEVSDLTQAEEKLDELITKCNLQLRLLTEDTQNK
KLGYLMCQDLRKTFDSPDQLVMVIRAPPETQMQVSEPSEGYQVSLKSTQGPIDVFLCPED
ISGVCSPVTGISPSKATYQIMPQPAEQPQCSSTQEMTLSTAASQQNSSPLPLFREAGAVL
ECYPFTNLGVLPELDLSPLSSSDFLSGEGLGNPLDGFINLSPPQSHSYHFGLEEHEGITE
LFDSDFGDFTPLELGWRETPTEQE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggcactcgtatcaggtcagacgtcggaggaccttttggcagactttgagtct
cttttgaatgctgggagtattgacttatcagagaaccaccagatagtcataatttctacc
cccggcaatgtgggcttaaactcagctgtacccagcaacactggagagatcctcctgttc
gctaccccccaaggccctgcggatgtggtccaggaccagcgacggccaactctgggacga
cctccggtgaagaggaagctggacttggacagtgatcaccagtatgtcagcacctctcgc
ccaccttctcttgggagggccccaacgtccacaccagcaccacccagagttccaaagcct
tcgacagagaagtctcgctatgacacatctttgaacctgaccaccaagcgcttcttagac
ctgctagcccagtctcctgacggggtggtggacctcaactgggcctcacaggtcctggaa
gtgcagaagagacgcatctatgacatcaccaatgtcttggagggtatccagctcatctcc
aagaaatcaaagaacaacatacaatggctggggaaccacattgatggagcgtctgtttcc
cgttaccaggacctacagaaagaggtctctgatttgacacaggctgaggagaaactggat
gagcttattaccaagtgtaacctccagctcagactcctcactgaggatacccagaacaag
aagctgggttatttgatgtgccaggatctacggaagacttttgactctcctgaccagctg
gtgatggtcatcagagcccctccagagacccagatgcaagtgtcagagcccagtgagggc
tatcaggtctccctgaagagcacccagggtcccattgatgtcttcctgtgcccagaggat
atttctggtgtctgcagcccagtgacaggcatcagcccttctaaggccacataccagata
atgccccagcctgcagaacaaccacagtgcagttccacacaggaaatgacattgtcaaca
gctgcgtcccaacagaactcctctccactgccattgtttcgtgaagcgggagcagtcctg
gaatgttacccgttcactaacttgggagtgctgccagaattggacctttcacccttgtca
tcctctgacttcctcagtggggagggccttggtaacccactggatgggttcatcaacctg
tcccctccacaaagccacagctaccactttggcctagaggagcatgagggcatcactgaa
ctgtttgactctgactttggagacttcaccccactagagttggggtggagagaaacaccc
acagaacaagaatga
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