Oncorhynchus mykiss (rainbow trout): 110534441
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Entry
110534441 CDS
T07259
Symbol
kdm2aa
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110534441 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110534441 (kdm2aa)
04121 Ubiquitin system [BR:
omy04121
]
110534441 (kdm2aa)
03036 Chromosome and associated proteins [BR:
omy03036
]
110534441 (kdm2aa)
Enzymes [BR:
omy01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
110534441 (kdm2aa)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
110534441 (kdm2aa)
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110534441 (kdm2aa)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
110534441 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
110534441 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
DUF7885
Cupin_8
LRR_4
Roughex
Motif
Other DBs
NCBI-GeneID:
110534441
NCBI-ProteinID:
XP_021474980
Ensembl:
ENSOMYG00000019655
UniProt:
A0A8C7VQX1
LinkDB
All DBs
Position
10:61746177..61768303
Genome browser
AA seq
1299 aa
AA seq
DB search
MGGFTVANQDQSSYPENVSQQCKAPGVKTQQKPGGRLAPSTVLEQAYSIMVRSGTRRRYH
DDGISDDEIEGKRTFDLEEKLTSERFTSDRVKRMEGKDLTFEYIQRGGLRDPIIFEKPDG
LGIKMPDPDFSVNDVKIFVGSRRMMDVMDVSTQKGIEMSMAQWRRYYETPPSQRDKLYNV
ISLEFSHTKLENLVQRPASVDIIDWVDNMWPRHLKERQRDSTNSITDMQYPKVQKYCLMS
VQGCYTDFHIDFGGSSVWYHILRGGKVFWLIPPTPQNLELYEDWVLSGKQGDIFLGDKAQ
DCQRIELKQGYTFMIPSGWIHAVYTPVDTLVFGGNFLHSFNIPMQLNIYSIEDRTRVPAK
FRYPFYYEMCWYVLERYLFSLTNTSYLTPDFQKHSLGIGLTRDPSTCESVNGHTQEEDEE
EAPPTRGSKPGVKVHLTPFELEGLWNLLGKLESLPSQKNCVPAGIHDAPALLHDIRALLK
EHANDIPKLSYTGKPIVKWPKRPSWYQPPPPPPPVARPKLSATVVTPRPQKPASSMSVLR
RRRVRCKRCEACVRTECGDCNFCRDMKKFGGPGKLKQTCVLRQCLAPGLPLSVVCEICAE
GNQEGGEGPVFALTLMECSNCAQIAHPACLKVTGDGVVNTDLPSCWECPKCVLGITDTEV
KEDKNKMLHAKRKSSSYLDGRIAKIYRRRGHSRDDDDDSGSDDDDDDNDEGSRGGGGGAG
QKMSGPRPRGSGSASRRGYGTGRRGIWRGSSHIGAGRGSGLAPHSSLKMRRGRGGLGAGR
GDREGGRRERGGRVRLRGGTRMQRRRDESEDDDDDDEEDDDSEEDRQHHHRQRRRRRRTD
DEEDDDDDEDDDEEDSSARDLEDEDMADEDEDEEDDENRSDSEPEPPVLLVSDLNDDLLN
GSYLTVTLQRPPRAKRHPGSIVPKLEAAMSPRTHGGGPGYVQHKTLGKTRHKNGMVAAGN
GLAQPAKNPVGRPPRHRINNPHGDTTDRERERDTASHSYSDSSASPTPPPHSSHSPSSLL
SLPSFKDVGNEKGGEKEVWVAVFRYLSRAELASCMAVCKAWYKWSCDKRLWSGVDVSRCP
SLSSQAVQGIIKRQPTSLDLSWTPVSKKQITLLIHRLPGLKELMIAGCSWSSMSALSTPS
LPCLRTLDLRWAEGVKDTQIRDLVIPPGCDSRSRLRGCVALRLAGLDISDSTLRLILRHM
PLLERLDLAHCRDLTDQSICLLTAAGTNTRNTLTEINLAGCNKLTDGCLAYLKRASGLAL
LDLRGCKGVTLRGCEGFISDLSHCVLFCMTEEKLIQRIS
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgggcggctttactgtagcaaaccaagaccaaagtagctacccagaaaacgtgtctcag
caatgcaaagctccgggagtcaagacacagcagaagccaggaggcagactggccccgtcg
accgtccttgaacaggcctactcaatcatggtgcggtcgggcacgcggcggcgctaccat
gacgatggtatctcggacgacgagatcgaggggaagaggacctttgacctggaggagaag
ctgacgagcgagaggttcacctcggacagggtcaaacgcatggaggggaaagacctcacg
tttgagtacatccaaagaggtgggttgagggacccgatcatctttgagaagccagacgga
ctgggcatcaagatgccagatccagacttcagtgtgaacgacgtcaagatatttgtcggc
agcaggcgtatgatggatgtgatggatgtcagtactcagaagggtatagagatgtctatg
gcccagtggagacgttactacgagacgcccccctcccagagggacaaactctacaacgtc
atcagcctggagtttagccacaccaagctggagaacctggtccagaggcctgcatcggtg
gacatcatagactgggtggacaacatgtggcctcggcacctgaaggagagacagagagac
tccaccaactccatcacagacatgcagtaccccaaagtgcagaagtactgtctaatgagt
gtgcagggctgctacacagacttccacatagacttcggcggttcctcggtctggtaccac
atactgcggggaggcaaggtgttctggctgatcccgcccacgcctcagaacctggagctg
tatgaggactgggtgttgtcggggaaacagggagacatcttcctgggagacaaggcccag
gactgtcagaggatcgagctgaagcagggctataccttcatgatcccctcaggttggatc
cacgcggtctacacaccagtggacaccctggtgtttgggggaaacttcctccatagcttc
aacatccccatgcaactcaacatctacagcatcgaggacaggacacgggtaccagctaag
ttccgttacccgttctattatgagatgtgttggtacgtgctggagagatacctcttcagt
ctgaccaacacctcctacctcacgcctgacttccagaaacactccctgggcatcggtctt
accagagacccctccacctgtgagtcagtcaacgggcacacccaggaggaggatgaagag
gaggctcccccgacccggggctctaagcccggggtgaaggttcacctcacgccctttgag
ctggaggggctgtggaacctgctggggaagctggagtcgttgccctcacagaagaactgt
gtcccggcaggcatacacgatgctcccgctctgctgcacgacatccgggccctgctgaag
gagcacgctaatgacatccccaaactgtcctacactggcaagcccatcgtcaagtggccc
aagaggccgtcgtggtaccagccccctccccctcctcccccggtggctcgtcccaagctg
tctgccacggtggtgaccccgcgaccccagaagcccgcctcctccatgtccgtgctgcgg
cggcggcgcgtgcggtgtaagcgctgcgaggcgtgtgtcaggacggagtgcggggactgt
aacttctgcagggacatgaagaagttcggcgggccggggaaactcaaacagacctgcgtg
ctccgacagtgtctggcgccgggtctgcccctgtcagtggtgtgtgagatctgtgcagag
gggaaccaggagggaggagaggggccagtcttcgccctcaccctcatggagtgttccaac
tgtgcccagatagcccaccccgcctgcctcaaggtaacaggggatggtgtggtgaataca
gatctgcccagctgctgggagtgtcccaaatgtgttctgggaatcaccgacactgaggtg
aaggaggacaagaataaaatgttacacgcaaaacgcaagtcttcttcgtatctcgacggc
cgcatcgccaagatctaccgtcgccgtggtcacagccgagacgacgacgacgactcgggc
agcgatgatgatgatgatgataatgatgaaggctccaggggcggaggaggaggcgcggga
cagaagatgtccgggccacgccctcgcggcagtggctccgcctctcggagaggctatggg
actgggaggcggggcatttggagaggctcctcccacataggggcaggccgcgggagtggg
cttgcccctcactcctccctgaagatgaggcgcggcagaggagggctgggggcgggccga
ggggatagagagggggggcgtagggagaggggcgggagagtgcgcctccggggaggcacc
aggatgcagaggcgcagggacgagtcagaggatgacgatgatgatgacgaggaagatgac
gacagcgaggaagatcggcagcatcaccaccggcaacgccgcaggcggaggagaacggac
gacgaggaagacgacgacgatgatgaagacgatgatgaggaagacagctcggcccgggac
ctggaggatgaggacatggcggatgaagatgaggatgaggaagacgatgagaacaggtca
gactctgaaccagagcctcccgtcctcctggtgtctgaccttaacgacgacctcctaaac
ggctcatacctgacagtgaccctacagcgcccccccagggccaaacgccaccccggctcc
atcgtgcccaagctggaggccgccatgtctcccagaacccacggcggcggtccaggttac
gtccagcataaaactctcgggaagacgcggcacaaaaacggcatggtcgccgccggcaac
ggcctggcccaacccgctaagaatccagtcggccggccgcctcgtcaccgtatcaacaat
ccccacggcgacacaacagacagggaaagagagagggacactgcctctcattcctactct
gactcctcggcctcccccacccctcctccccactcctcccactctccttcctcgctcctg
tcgcttccctcctttaaggatgtaggaaacgagaaaggaggggagaaggaggtgtgggtg
gcggtgttccgttacctgagccgagccgagctggctagctgtatggctgtctgtaaggcc
tggtacaaatggagttgtgacaagcgtctgtggagtggtgtggatgtatcgcggtgtccc
tccctctcctcccaggccgtgcagggcatcatcaaacgccagcccacctcgctggacctt
tcctggacccccgtgtccaagaaacagatcaccctgctcatacaccgcctgccaggcctg
aaggagttgatgatagcaggttgctcctggtcgtccatgtcagccctgtccacccccagc
ctgccgtgcctccgtaccctggacctgcgctgggcagagggcgtcaaagacacccagatc
agggacctggtcataccaccaggttgtgacagtcggtctcggctgcgtggctgtgtggcg
ctgcgtctagccggcctggacatcagtgactccaccctgaggctgattctccgtcacatg
cccctgctagagcggctggacctggcccactgcagggacctcacggaccaatccatctgc
ctgctcaccgccgccggcacaaacacacgcaacacgctcacggagatcaacctcgcaggt
tgtaacaagctgacggacggctgtctggcgtacctgaagagggcgtctggcctggcgctg
ctggacctgcggggctgcaaaggtgtgacgctgcggggctgtgagggcttcatctcggac
ctctctcactgcgtcctgttctgtatgacggaggagaaactcattcagaggatatcgtaa
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