Oncorhynchus mykiss (rainbow trout): 110534508
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Entry
110534508 CDS
T07259
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/WD repeat-containing protein 7
KO
K10260
F-box and WD-40 domain protein 7
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110534508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110534508
04121 Ubiquitin system [BR:
omy04121
]
110534508
Membrane trafficking [BR:
omy04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
110534508
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110534508
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_DCAF12
ASA1
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_RIG_1st
Beta-prop_NOL10_N
Beta-prop_Aladin
F-box
Beta-prop_ACSF4
TRM82_WD
CFAP251_N
PAC11
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Ge1_WD40
CDtoxinA
WD40_RFWD3
Beta-prop_IFT140_2nd
KNTC1_N
eIF2A
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
PQQ_2
PALB2_WD40
Beta-prop_WDR19_2nd
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
110534508
NCBI-ProteinID:
XP_021475065
Ensembl:
ENSOMYG00000008634
LinkDB
All DBs
Position
10:66474115..66567984
Genome browser
AA seq
617 aa
AA seq
DB search
MLRHCPIPLFTSSRSRKKMPKASGKEKAPLATPESLALDIVADPKVVAKEPPLPPQKVLR
LFSINIITQGLPFCRRRMKRKLDHGPEVRSFPSGKKPCKGSEYPSATGLVPYPATPTTFG
HIRTANGQGQQRRRITSIPSPTGLQEWLRTFQSWSGPEKLMALDELIDSCEPTHVKHMMQ
VIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCREEGI
DEPLAFKKRKVTKPGFTHSPWKCAYIRQHRIDTNWRRGDLRSPKVLKGHDDHVITCLQFC
GNRIVSGSDDNSLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET
GDCIHTLYGHTSTVRCMHLHEKTVVSGSRDATLRVWNVETGQCLHVLMGHVAAVRCVQYD
GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVET
GNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCL
QFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN
GTEETKLLVLDFDVDMK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggcattgccccataccccttttcacatcttccagatcccgaaagaagatgccc
aaggcctctgggaaagagaaggcccccctggcaacaccggagagcctggccctggacata
gtggcagacccaaaagtggtggctaaggagcctccactgcccccgcagaaagtgctccgg
ctcttcagcatcaacatcatcactcaggggctgcccttctgtcgcagacggatgaagaga
aagttggaccatggcccagaggtccgatctttcccttcaggaaaaaagccctgcaaaggc
tccgagtatccaagtgctacagggctggtcccctacccagccacccccaccacgtttggg
cacatcaggacagctaacggtcaggggcagcagaggcggcgtatcacctccatcccttct
cccacaggtctccaggaatggctccggacatttcagagctggagtggcccagagaagctg
atggcgctggatgagttgatcgacagctgtgagcccacgcatgtcaaacacatgatgcag
gtcattgagccgcagttccaacgcgacttcatctccctgctgcccaaagagttggccctg
tacgtgctgtcgttccttgagcccaaggacctgctgcaggccgctcagacctgtcgttac
tggaggatcctggctgaggacaacctcctctggagggagaagtgccgggaggagggcatt
gatgagcctctagccttcaagaagaggaaagtcaccaagccgggcttcacccacagcccc
tggaagtgtgcgtacatcaggcagcataggatagacaccaactggaggagaggagacctc
cgatcacccaaggtgcttaagggtcatgatgaccatgtcatcacctgcctccagttctgt
ggtaaccgcatcgtcagcggctctgacgacaactcgctcaaggtctggtcggctgtcaca
ggaaagtgtctgaggacgttggtgggccacacggggggcgtgtggtcgtcccagatgagg
gacaacatcatcatcagcggctccaccgaccggacgctgaaggtctggaacgcggagacg
ggcgactgtatccacaccctgtacgggcatacctcaacggtgcgctgtatgcacctgcac
gagaaaacggtggtgagtggttctcgcgacgccacgctgcgcgtgtggaacgtggagacg
ggccagtgtttacacgtcctcatgggccacgtggcggcggtgcgctgcgtccagtacgac
ggccgcagggtggtcagcggggcctacgacttcatggtcaaggtctgggaccccgagact
gagacctgcctccacacgctgcagggccacaccaacagagtctactcactacagtttgat
gggatccacgtggtgagtggtagcctggacacgtctatccgggtgtgggatgtggagacg
ggtaactgcatccacactctgacgggtcaccagtccctcaccagcggcatggagctcaaa
gacaacatcctggtctcgggcaacgccgactccaccgtcaagatctgggacatcaagacg
ggacagtgcctgcagacgttgcaaggtccccacaagcaccagagcgccgtgacgtgcctg
cagttcaacaagaactttgtcatcaccagctcggacgacggcacggtgaagctgtgggac
ctgaagacgggcgagttcatccgtaacctggtgacgctggagagcggcggcagcggcggg
gtggtgtggcgtatccgcgcctccaacaccaagctggtgtgtgccgtgggaagccgcaac
ggcaccgaggagacaaaactactggtgctagactttgacgtggacatgaagtga
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